Hegde, S.R. and Pal, K. and Mande, S.C. (2014) Differential enrichment of regulatory motifs in the composite network of protein-protein and gene regulatory interactions. BMC Systems Biology, 8. p. 26. ISSN 1752-0509

Hegde, S.R. and Rajasingh, H. and Das, C. and Mande, S.S. and Mande, S.C. (2012) Understanding Communication Signals during Mycobacterial Latency through Predicted Genome-Wide Protein Interactions and Boolean Modeling. PLoS ONE, 7 (3). e33893. ISSN 1932-6203

Jailkhani, N. and Ravichandran, S. and Hegde, S.R. and Siddiqui, Z. and Mande, S.C. and Rao, K.V.S. (2011) Delineation of key regulatory elements identifies points of vulnerability in the mitogen-activated signaling network. Genome Research, 21 (12). pp. 2067-2081. ISSN 1088-9051

Manimaran, P. and Hegde, S.R. and Mande, S.C. (2009) Prediction of conditional gene essentiality through graph theoretical analysis of genome-wide functional linkages. Molecular BioSystems, 5 (12). pp. 1936-1942. ISSN 1742-206X

Hegde, S.R. and Manimaran, P. and Mande, S.C. (2008) Dynamic Changes in Protein Functional Linkage Networks Revealed by Integration with Gene Expression Data. PLoS Computational Biology, 4 (11). e1000237. ISSN 1553-7358