A

Ahmad, R. and Kamra, A. and Hasnain, S.E. (2004) Fibroin Silk Proteins from the Nonmulberry SilkwormPhilosamia riciniAre Biochemically and Immunochemically Distinct from Those of the Mulberry SilkwormBombyx mori. DNA and Cell Biology, 23 (3). pp. 149-154. ISSN 1044-5498

Ahmed, N. and Alam, M. and Rao, K.R. and Kauser, F. and Kumar, N.A. and Qazi, N.N. and Sangal, V. and Sharma, V.D. and Das, R. and Katoch, V.M. and Murthy, K.J.R. and Suneetha, S. and Sharma, S.K. and Sechi, L.A. and Gilman, R.H. and Hasnain, S.E. (2004) Molecular Genotyping of a Large, Multicentric Collection of Tubercle Bacilli Indicates Geographical Partitioning of Strain Variation and Has Implications for Global Epidemiology of Mycobacterium tuberculosis. Journal of Clinical Microbiology, 42 (7). pp. 3240-3247. ISSN 0095-1137

Ahmed, N. and Hasnain, S.E. (2004) Genomics of Mycobacterium tuberculosis: old threats & new trends. The Indian Journal of Medical Research, 120 (4). pp. 207-212. ISSN 0971-5916

Akif, M. and Chauhan, R. and Mande, S.C. (2004) Expression, purification, crystallization and preliminary X-ray crystallographic studies of Mycobacterium tuberculosisthioredoxin reductase. Acta Crystallographica Section D Biological Crystallography, 60 (4). pp. 777-779. ISSN 0907-4449

Awasthi, A.K. and Nagaraja, G.M. and Naik, G.V. and Kanginakudru, S. and Thangavelu, K. and Nagaraju, J. (2004) Genetic diversity and relationships in mulberry (genus Morus) as revealed by RAPD and ISSR marker assays. BMC Genetics, 5 (1). pp. 1-9. ISSN 1471-2156

B

Banerjee, S. and Ashok, N. and Raviprasad, P. and Katoch, V.M. and Murthy, K.J.R. and Hasnain, S.E. (2004) Mycobacterium tuberculosis (Mtb) isocitrate dehydrogenases show strong B cell response and distinguish vaccinated controls from TB patients. Proceedings of the National Academy of Sciences, 101 (34). pp. 12652-12657. ISSN 0027-8424

Bashyam, M.D. and Bashyam, L. and Savithri, G.R. and Gopikrishna, M. and Sangal, V. and Radha Rama Devi, A. (2004) Molecular genetic analyses of beta-thalassemia in South India reveals rare mutations in the beta-globin gene. Journal of Human Genetics, 49 (8). pp. 408-413. ISSN 1434-5161

Bashyam, M.D. and Hasnain, S.E. (2004) The extracytoplasmic function sigma factors: role in bacterial pathogenesis. Infection, Genetics and Evolution, 4 (4). pp. 301-308. ISSN 1567-1348

C

Carroll, I.M. and Ahmed, N. and Beesley, S.M. and Khan, A.A. and Ghousunnissa, S. and Moráin, C.A. and Habibullah, C.M. and Smyth, C.J. (2004) Microevolution between paired antral and paired antrum and corpus Helicobacter pylori isolates recovered from individual patients. Journal of Medical Microbiology, 53 (7). pp. 669-677. ISSN 0022-2615

Carroll, I.M. and Khan, A.A. and Ahmed, N. (2004) Revisiting the pestilence of Helicobacter pylori: insights into geographical genomics and pathogen evolution. Infection, Genetics and Evolution, 4 (2). pp. 81-90. ISSN 1567-1348

Chakhaiyar, P. and Hasnain, S.E. (2004) Defining the Mandate of Tuberculosis Research in a Postgenomic Era. Medical Principles and Practice, 13 (4). pp. 177-184. ISSN 1011-7571

Chakhaiyar, P. and Nagalakshmi, Y. and Aruna, B. and Murthy, K.J.R. and Katoch, V.M. and Hasnain, S.E. (2004) Regions of High Antigenicity within the Hypothetical PPE Major Polymorphic Tandem Repeat Open‐Reading Frame, Rv2608, Show a Differential Humoral Response and a Low T Cell Response in Various Categories of Patients with Tuberculosis. The Journal of Infectious Diseases, 190 (7). pp. 1237-1244. ISSN 0022-1899

Choudhary, R.K. and Pullakhandam, R. and Ehtesham, N.Z. and Hasnain, S.E. (2004) Expression and characterization of Rv2430c, a novel immunodominant antigen of Mycobacterium tuberculosis. Protein Expression and Purification, 36 (2). pp. 249-253. ISSN 1046-5928

F

Felix, K. and Wise, K. and Manna, S.K. and Yamauchi, K. and Wilson, B.L. and Thomas, R.L. and Kulkarni, A.D. and Pellis, N.R. and Ramesh, G.T. (2004) Altered cytokine expression in tissues of mice subjected to simulated microgravity. Molecular and Cellular Biochemistry, 266 (1/2). pp. 79-85. ISSN 0300-8177

G

Ghosh, S. and Rasheedi, S. and Rahim, S.S. and Banerjee, S. and Choudhary, R.K. and Chakhaiyar, P. and Ehtesham, N.Z. and Mukhopadhyay, Sangita and Hasnain, S.E. (2004) Method for enhancing solubility of the expressed recombinant proteins in Escherichia coli. BioTechniques, 37 (3). 418, 420, 422-433. ISSN 0736-6205

Gowrishankar, J. and Harinarayanan, R. (2004) Why is transcription coupled to translation in bacteria? Molecular Microbiology, 54 (3). pp. 598-603. ISSN 0950-382X

H

Harinarayanan, R. and Gowrishankar, J. (2004) A dnaC Mutation in Escherichia coli That Affects Copy Number of ColE1-Like Plasmids and the PriA-PriB (but Not Rep-PriC) Pathway of Chromosomal Replication Restart. Genetics, 166 (3). pp. 1165-1176. ISSN 0016-6731

Hasnain, S.E. and Ahmed, N. (2004) Leptospirosis. The Lancet Infectious Diseases, 4 (9). p. 543. ISSN 1473-3099

Hussain, M.A. and Kauser, F. and Khan, A.A. and Tiwari, S. and Habibullah, C.M. and Ahmed, N. (2004) Implications of Molecular Genotyping of Helicobacter pylori Isolates from Different Human Populations by Genomic Fingerprinting of Enterobacterial Repetitive Intergenic Consensus Regions for Strain Identification and Geographic Evolution. Journal of Clinical Microbiology, 42 (6). pp. 2372-2378. ISSN 0095-1137

K

Kamal, A. and Ramesh, G. and Srinivas, O. and Ramulu, P. and Laxman, N. and Rehana, T. and Deepak, M. and Achary, M.S. and Nagarajaram, H.A. (2004) Design, synthesis, and evaluation of mixed imine–amine pyrrolobenzodiazepine dimers with efficient DNA binding affinity and potent cytotoxicity. Bioorganic & Medicinal Chemistry, 12 (20). pp. 5427-5436. ISSN 0968-0896

Kauser, F. and Khan, A.A. and Hussain, M.A. and Carroll, I.M. and Ahmad, N. and Tiwari, S. and Shouche, Y. and Das, B. and Alam, M. and Ali, S.M. and Habibullah, C.M. and Sierra, R. and Megraud, F. and Sechi, L.A. and Ahmed, N. (2004) The cag Pathogenicity Island of Helicobacter pylori Is Disrupted in the Majority of Patient Isolates from Different Human Populations. Journal of Clinical Microbiology, 42 (11). pp. 5302-5308. ISSN 0095-1137

Khurad, A.M. and Mahulikar, A. and Rathod, M.K. and Rai, M.M. and Kanginakudru, S. and Nagaraju, J. (2004) Vertical transmission of nucleopolyhedrovirus in the silkworm, Bombyx mori L. Journal of Invertebrate Pathology, 87 (1). pp. 8-15. ISSN 0022-2011

King, R.A. and Markov, D. and Sen, Ranjan and Severinov, K. and Weisberg, R.A. (2004) A Conserved Zinc Binding Domain in the Largest Subunit of DNA-dependent RNA Polymerase Modulates Intrinsic Transcription Termination and Antitermination but does not Stabilize the Elongation Complex. Journal of Molecular Biology, 342 (4). pp. 1143-1154. ISSN 0022-2836

M

Majeed, A.A. and Ahmed, N. and Rao, K.R. and Ghousunnissa, S. and Kauser, F. and Bose, B. and Nagarajaram, H.A. and Katoch, V.M. and Cousins, D.V. and Sechi, L.A. and Gilman, R.H. and Hasnain, S.E. (2004) AmpliBASE MTTM: a Mycobacterium tuberculosis diversity knowledgebase. Bioinformatics, 20 (6). pp. 989-992. ISSN 1367-4803

Metta, M. and Kanginakudru, S. and Gudiseva, N. and Nagaraju, J. (2004) Genetic characterization of the Indian cattle breeds, Ongole and Deoni (Bos indicus), using microsatellite markers – a preliminary study. BMC Genetics, 5 (1). p. 16. ISSN 1471-2156

Mukhopadhyay, Sangita and Srivastava, V.M.L. and Murthy, P.K. and Hasnain, S.E. (2004) Poorer NF-κB signaling by microfilariae in macrophages from BALB/c mice affects their ability to produce cytotoxic levels of nitric oxide to kill microfilariae. FEBS Letters, 567 (2-3). pp. 275-280. ISSN 0014-5793

N

Nagaraja, and Nagaraju, J. and Ranganath, H.A. (2004) Molecular phylogeny of the nasuta subgroup of Drosophila based on 12S rRNA, 16S rRNA and CoI mitochondrial genes, RAPD and ISSR polymorphisms. Genes & Genetic Systems, 79 (5). pp. 293-299. ISSN 1341-7568

Nagaraju, J. (2004) Spider silks: a possible key to evolution of spiders. Heredity, 93 (5). pp. 520-521. ISSN 0018-067X

Nageswara Rao, S. and Muthulakshmi, M. and Kanginakudru, S. and Nagaraju, J. (2004) Phylogenetic relationships of three new microsporidian isolates from the silkworm, Bombyx mori. Journal of Invertebrate Pathology, 86 (3). pp. 87-95. ISSN 0022-2011

Nandineni, M.R. and Gowrishankar, J. (2004) Evidence for an Arginine Exporter Encoded by yggA (argO) That Is Regulated by the LysR-Type Transcriptional Regulator ArgP in Escherichia coli. Journal of Bacteriology, 186 (11). pp. 3539-3546. ISSN 0021-9193

Nandineni, M.R. and Laishram, R.S. and Gowrishankar, J. (2004) Osmosensitivity Associated with Insertions in argP (iciA) or glnE in Glutamate Synthase-Deficient Mutants of Escherichia coli. Journal of Bacteriology, 186 (19). pp. 6391-6399. ISSN 0021-9193

P

Panicker, S.G. and Mandal, A.K. and Reddy, A.B.M. and Gothwal, V.K. and Hasnain, S.E. (2004) Correlations of Genotype with Phenotype in Indian Patients with Primary Congenital Glaucoma. Investigative Opthalmology & Visual Science, 45 (4). pp. 1149-1156. ISSN 1552-5783

Prabhakara, K. and Angalena, R. and Radha Rama Devi, A. (2004) Familial (9;11)(p22;p15.5)pat translocation and XX sex reversal in a phenotypic boy with cryptorchidism and delayed development. Genetic Counseling (Geneva, Switzerland), 15 (1). pp. 37-41. ISSN 1015-8146

Prabhakara, K. and Radha Rama Devi, A. (2004) Premature centromere division versus C-anaphases in cultures: Need for consensus and guidelines. American Journal of Medical Genetics, 124A (3). p. 331. ISSN 0148-7299

Prabhakara, K. and Wyandt, H.E. and Huang, X.L. and Prasad, K.S. and Radha Rama Devi, A. (2004) Recurrent proximal 18p monosomy and 18q trisomy in a family with a maternal pericentric inversion of chromosome 18. Annales de Génétique, 47 (3). pp. 297-303. ISSN 0003-3995

Q

Qamra, R. and Mande, S.C. (2004) Crystal Structure of the 65-Kilodalton Heat Shock Protein, Chaperonin 60.2, of Mycobacterium tuberculosis. Journal of Bacteriology, 186 (23). pp. 8105-8113. ISSN 0021-9193

Qamra, R. and Srinivas, Volety and Mande, S.C. (2004) Mycobacterium tuberculosis GroEL Homologues Unusually Exist as Lower Oligomers and Retain the Ability to Suppress Aggregation of Substrate Proteins. Journal of Molecular Biology, 342 (2). pp. 605-617. ISSN 0022-2836

R

Radha Rama Devi, A. and Govindaiah, V. and Ramakrishna, Gayatri and Naushad, S.M. (2004) Prevalence of methylene tetrahydrofolate reductase polymorphism in South Indian population. Current Science, 86 (3). pp. 440-443. ISSN 0011-3891

Radha Rama Devi, A. and Naushad, S.M. (2004) Newborn screening in India. The Indian Journal of Pediatrics, 71 (2). pp. 157-160. ISSN 0019-5456

Reddy, A.B.M. and Kaur, K. and Mandal, A.K. and Panicker, S.G. and Thomas, R. and Hasnain, S.E. and Balasubramanian, D. and Chakrabarti, S. (2004) Mutation spectrum of the CYP1B1 gene in Indian primary congenital glaucoma patients. Molecular vision, 10. pp. 696-702. ISSN 1090-0535

Rehman, K.K. and Ayesha, Q. and Khan, A.A. and Ahmed, N. and Habibullah, C.M. (2004) Tyrosine aminotransferase and gamma-glutamyl transferase activity in human fetal hepatocyte primary cultures under proliferative conditions. Cell Biochemistry and Function, 22 (2). pp. 89-96. ISSN 0263-6484

S

Sarkar, A. and Sreenivasan, Y. and Ramesh, G.T. and Manna, S.K. (2004) Beta-D-Glucoside Suppresses Tumor Necrosis Factor-induced Activation of Nuclear Transcription Factor B but Potentiates Apoptosis. Journal of Biological Chemistry, 279 (32). pp. 33768-33781. ISSN 0021-9258

Shanti, M.B. and Manjula Reddy, and Gowrishankar, J. (2004) Distinct Signatures for Mutator Sensitivity of lacZ Reversions and for the Spectrum of lacI/lacO Forward Mutations on the Chromosome of Nondividing Escherichia coli. Genetics, 166 (2). pp. 681-692. ISSN 0016-6731

Siddiqi, N. and Das, R. and Pathak, Niteen and Banerjee, S. and Ahmed, N. and Katoch, V.M. and Hasnain, S.E. (2004) Mycobacterium tuberculosis isolate with a distinct genomic identity overexpresses a tap-like efflux pump. Infection, 32 (2). pp. 109-111. ISSN 0300-8126

Sowjanya, A.P. and Ramakrishna, Gayatri (2004) TRendys meeting 2003. Indian Journal of Biochemistry & Biophysics, 41 (2-3). pp. 128-130. ISSN 0301-1208

V

Vardhini, D. and Suneetha, S. and Ahmed, N. and Joshi, D.S.M. and Karuna, S. and Magee, X. and Vijayalakshmi, D.S.R. and Sridhar, V. and Karunakar, K.V. and Archelos, J.J. and Suneetha, L.M. (2004) Comparative proteomics of the Mycobacterium leprae binding protein myelin P0: its implication in leprosy and other neurodegenerative diseases. Infection, Genetics and Evolution, 4 (1). pp. 21-28. ISSN 1567-1348

Venkaiah, B. and Viswanathan, P. and Habib, S. and Hasnain, S.E. (2004) An Additional Copy of the Homologous Region (hr1) Sequence in theAutographa californicaMultinucleocapsid Polyhedrosis Virus Genome Promotes Hyperexpression of Foreign Genes†. Biochemistry, 43 (25). pp. 8143-8151. ISSN 0006-2960

Vijayachari, P. and Ahmed, N. and Sugunan, A.P. and Ghousunnissa, S. and Rao, K.R. and Hasnain, S.E. and Sehgal, S.C. (2004) Use of Fluorescent Amplified Fragment Length Polymorphism for Molecular Epidemiology of Leptospirosis in India. Journal of Clinical Microbiology, 42 (8). pp. 3575-3580. ISSN 0095-1137

W

Wise, K. and Manna, S.K. and Barr, J. and Gunasekar, P. and Ramesh, G. (2004) Activation of activator protein-1 DNA binding activity due to low level manganese exposure in pheochromocytoma cells. Toxicology Letters, 147 (3). pp. 237-244. ISSN 0378-4274

Y

Yasodha, R. and Kathirvel, M. and Sumathi, R. and Gurumurthi, K. and Archak, S. and Nagaraju, J. (2004) Genetic analyses of casuarinas using ISSR and FISSR markers. Genetica, 122 (2). pp. 161-72. ISSN 0016-6707

Yellaboina, S. and Ranjan, Sarita and Chakhaiyar, P. and Hasnain, S.E. and Ranjan, Akash (2004) Prediction of DtxR regulon: Identification of binding sites and operons controlled by Diphtheria toxin repressor in Corynebacterium diphtheriae. BMC Microbiology, 4 (1). p. 38. ISSN 1471-2180

Yellaboina, S. and Seshadri, J. and Kumar, M.S. and Ranjan, Akash (2004) PredictRegulon: a web server for the prediction of the regulatory protein binding sites and operons in prokaryote genomes. Nucleic Acids Research, 32 (Web Se). W318-W320. ISSN 1362-4962