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Number of items: 961.

Kasbekar, D.P. (2020) Neurospora exhibits the highest known non-viral mutation rate. Current Science, 119 (5). p. 737. ISSN 0011-3891

Srivastava, Varsha and Prabhakar Rao, K. and Surekha Rani, H. and Kumawat, R.K. and Mishra, Aditi and Shrivastava, Pankaj (2020) Genomic diversity in the Goud population of Telangana, India inferred using twenty three autosomal marker PowerPlex® Fusion 6C System. Meta Gene, 25. p. 100718. ISSN 2214-5400

Bakshi, Asif and Sipani, Rashmi and Ghosh, Neha and Joshi, Rohit (2020) Sequential activation of Notch and Grainyhead gives apoptotic competence to Abdominal-B expressing larval neuroblasts in Drosophila Central nervous system. PLOS Genetics, 16 (8). e1008976. ISSN 1553-7404

Parapatla, H. and Gudla, R. and Konduru, G.V. and Devadasu, E.R. and Nagarajaram, H.A. and Sritharan, M. and Subramanyam, R. and Siddavattam, D. (2020) Organophosphate hydrolase interacts with ferric-enterobactin and promotes iron uptake in association with TonB dependent transport system. Biochemical Journal, 477 (15). pp. 2821-2840. ISSN 0264-6021

Ghosh, D.K. and Ranjan, Akash (2020) The metastable states of proteins. Protein Science, 29 (7). pp. 1559-1568. ISSN 0961-8368

Shashi Kiran, and Kiran, Manjari and Ramakrishna, Gayatri (2020) Sirtuin 7 Promotes Mesenchymal to Epithelial Transition by β-Catenin Redistribution and Stabilization. Frontiers in Oncology, 10. p. 740. ISSN 2234-943X

Trivedi, Jay and Ghosh, Payel and Mitra, Debashis (2020) N-p-Tosyl-L-phenylalanine chloromethyl ketone (TPCK) inhibits HIV-1 by suppressing the activity of viral protease. Biochemical and Biophysical Research Communications, 527 (1). pp. 167-172. ISSN 0006-291X

Agarwal, Rachna and Trivedi, Jay and Mitra, Debashis (2020) High yield production of recombinant cyanovirin-N (antiviral lectin) exhibiting significant anti-HIV activity, from a rationally selected Escherichia coli strain. Process Biochemistry, 93. pp. 1-11. ISSN 1359-5113

Kumari, Sonam and Kumar, Mohit and Khandelwal, N.K. and Pandey, A.K. and Bhakt, Priyanka and Kaur, Rupinder and Prasad, Rajendra and Gaur, N.A. (2020) A homologous overexpression system to study roles of drug transporters in Candida glabrata. FEMS Yeast Research, 20 (4). foaa032. ISSN 1567-1356

Rungsung, I. and Sahay, M. and Dalal, Ashwin (2020) Digenic variations of human COL4A3 and COL4A4 genes result in early onset renal failure. Gene Reports, 19. p. 100602. ISSN 2452-0144

Adduri, R.S.R. and George, S.A. and Padmavathi, K. and Bashyam, M.D. (2020) SMARCD1 is a transcriptional target of specific non‐hotspot mutant p53 forms. Journal of Cellular Physiology, 235 (5). pp. 4559-4570. ISSN 0021-9541

Ghosh, D.K. and Kumar, Abhishek and Ranjan, Akash (2020) T54R mutation destabilizes the dimer of superoxide dismutase 1T54R by inducing steric clashes at the dimer interface. RSC Advances, 10 (18). pp. 10776-10788. ISSN 2046-2069

Kumar, Kundan and Moirangthem, Romila and Kaur, Rupinder (2020) Histone H4 dosage modulates DNA damage response in the pathogenic yeast Candida glabrata via homologous recombination pathway. PLOS Genetics, 16 (3). e1008620. ISSN 1553-7404

Arora, Veronica and Setia, Nitika and Dalal, Ashwin and Vanaja, M.C. and Gupta, Deepti and Razdan, Tinku and Phadke, S.R. and Saxena, Renu and Rohtagi, Anshu and Verma, I.C. and Puri, R.D. (2020) Sialidosis type II: Expansion of phenotypic spectrum and identification of a common mutation in seven patients. Molecular Genetics and Metabolism Reports, 22. p. 100561. ISSN 2214-4269

Kumar, Abhishek and Ghosh, D.K. and Ranjan, Akash (2020) Mefloquine binding to human acyl-CoA binding protein leads to redox stress-mediated apoptotic death of human neuroblastoma cells. NeuroToxicology, 77. pp. 169-180. ISSN 0161-813X

Thamban, Thushara and Agarwaal, Viplove and Khosla, Sanjeev (2020) Role of genomic imprinting in mammalian development. Journal of Biosciences, 45 (1). p. 20. ISSN 0250-5991

Raghavendra, V. and Chatterjee, Nirupama and Haldar, Devyani (2020) Cellular environment controls the dynamics of histone H3 lysine 56 acetylation in response to DNA damage in mammalian cells. Journal of Biosciences, 45 (1). p. 19. ISSN 0250-5991

Sanyal, Rajeshree and Harinarayanan, R. (2020) Activation of RelA by pppGpp as the basis for its differential toxicity over ppGpp in Escherichia coli. Journal of Biosciences, 45 (1). p. 28. ISSN 0250-5991

Rekha, Selvam and Kasbekar, D.P. (2020) A transmission ratio distortion and the ‘max-4’ ascus phenotype: Do both reflect the same Bateson-Dobzhansky-Muller Incompatibility emerging during trans-species introgression of translocations in Neurospora? Journal of Biosciences, 45 (1). p. 24. ISSN 0250-5991

Sahu, M.S. and Patra, Sandip and Kumar, Kundan and Kaur, Rupinder (2020) SUMOylation in Human Pathogenic Fungi: Role in Physiology and Virulence. Journal of Fungi, 6 (1). p. 32. ISSN 2309-608X

Gupta, S.K. and Rajendra Kumar, A. and Yousuf, S. and Gangi Reddy, C. and Ranjan, Akash (2020) Ectopic Expression of Rv0023 Mediates Isoniazid/Ethionamide Tolerance via Altering NADH/NAD+ Levels in Mycobacterium smegmatis. Frontiers in Microbiology, 11. p. 3. ISSN 1664-302X

Singh, Mugdha and Sarkar, A. and Kumar, Devinder and Nandineni, M.R. (2020) The genetic affinities of Gujjar and Ladakhi populations of India. Scientific Reports, 10 (1). p. 2055. ISSN 2045-2322

Ghosh, D.K. and Shrikondawar, A.N. and Ranjan, Akash (2020) Local structural unfolding at the edge-strands of beta sheets is the molecular basis for instability and aggregation of G85R and G93A mutants of Superoxide dismutase 1. Journal of Biomolecular Structure and Dynamics, 38 (3). pp. 647-653. ISSN 0739-1102

Trivedi, Jay and Mahajan, Dinesh and Jaffe, R.J. and Acharya, Arpan and Mitra, Debashis and Byrareddy, S.N. (2020) Recent Advances in the Development of Integrase Inhibitors for HIV Treatment. Current HIV/AIDS Reports, 17 (1). pp. 63-75. ISSN 1548-3568

Ali, Nida and Gowrishankar, J. (2020) Cross-subunit catalysis and a new phenomenon of recessive resurrection in Escherichia coli RNase E. Nucleic Acids Research, 48 (2). pp. 847-861. ISSN 0305-1048

Rasheed, M. and Kumar, Naveen and Kaur, Rupinder (2020) Global Secretome Characterization of the Pathogenic Yeast Candida glabrata. Journal of Proteome Research, 19 (1). pp. 49-63. ISSN 1535-3893

Ganguli, S. and Shah, Akruti and Hamid, Aisha and Singh, Arpita and Ravichand, P. and Bhandari, Rashna (2020) A high energy phosphate jump - From pyrophospho-inositol to pyrophospho-serine. Advances in Biological Regulation, 75. p. 100662. ISSN 2212-4926

Trivedi, Jay and Alam, Aftab and Joshi, Shruti and Kumar, Pavan and Venkatraju, C. and Mainkar, P.S. and Chandrasekhar, Srivari and Chattopadhyay, Samit and Mitra, Debashis (2020) A novel isothiocyanate derivative inhibits HIV-1 gene expression and replication by modulating the nuclear matrix associated protein SMAR1. Antiviral Research, 173. p. 104648. ISSN 0166-3542

Aggarwal, Shagun and Vineeth, V.S. and Das Bhowmik, A. and Tandon, A. and Kulkarni, A. and Dhanya Lakshmi, N. and Bhattacherjee, Amrita and Dalal, Ashwin (2020) Exome sequencing for perinatal phenotypes: the significance of deep phenotyping. Prenatal Diagnosis, 40 (2). pp. 260-273. ISSN 0197-3851

Manasa, C. and Bhandari, Rashna (2020) Back-Pyrophosphorylation Assay to Detect In Vivo InsP7-Dependent Protein Pyrophosphorylation in Mammalian Cells. Methods in Molecular Biology, 2091. pp. 93-105. ISSN 1064-3745

Ranganath, Prajnya and Sreeja, P. and Nair, Lekshmi and Pramod Kumar, P. and Aparna Shankar, and Sakthivel, M. and Dalal, Ashwin (2020) A newly recognized multiple malformation syndrome with caudal regression associated with a biallelic c.402G>A variant in TBX4. European Journal of Human Genetics. ISSN 1018-4813 (In Press)

Anupama, K. and Pranathi, K. and Sundaram, R.M. (2020) Assessment of genetic purity of bulked‐seed of rice CMS‐lines using capillary electrophoresis. ELECTROPHORESIS. ISSN 0173-0835 (In Press)

Chatterjee, Subhadeep and Samal, Biswajit and Singh, Prashantee and Pradhan, B.B. and Verma, Raj Kumar (2020) Transition of a solitary to a biofilm community life style in bacteria: a survival strategy with division of labour. The International Journal of Developmental Biology, 64 (4-6). pp. 269-275. ISSN 0214-6282

Kumar, Kundan and Moirangthem, Romila and Kaur, Rupinder (2020) Genome protection: histone H4 and beyond. Current Genetics. ISSN 0172-8083 (In Press)

Kasbekar, D.P. (2020) Fungal senescence induced by the Neurospora sen mutation and mitochondrial plasmids - the contributions of Ramesh Maheshwari. International Journal of Developmental Biology, 64 (1-3). pp. 29-34. ISSN 0214-6282

Divya, Pasumarthi and Gupta, N. and Sheth, J. and Jain, J.M.N. and Rungsung, I. and Kabra, M. and Ranganath, Prajnya and Aggarwal, Shagun and Phadke, S.R. and Girisha, K.M. and Shukla, A. and Datar, C. and Verma, I.C. and Puri, R.D. and Bhavsar, R. and Mistry, M. and Sankar, V.H. and Gowrishankar, K. and Agrawal, Divya and Nair, M. and Danda, S. and Soni, J.P. and Dalal, Ashwin (2020) Identification and characterization of 30 novel pathogenic variations in 69 unrelated Indian patients with Mucolipidosis Type II and Type III. Journal of Human Genetics. ISSN 1434-5161 (In Press)

Rasheed, M. and Anamika, B. and Kaur, Rupinder (2020) Host–pathogen interaction in Candida glabrata infection: current knowledge and implications for antifungal therapy. Expert Review of Anti-infective Therapy. ISSN 1478-7210 (In Press)

Shetty, K. and Sarma, A.S. and Devan, Meera and Dalal, Ashwin and Dash, G.K. and Jannabhatla, A. and Patil, S.J. (2020) Recurrent <i>ADCY5</i> Mutation in Mosaic Form with Nocturnal Paroxysmal Dyskinesias and Video Electroencephalography Documentation of Dramatic Response to Caffeine Treatment. Journal of Movement Disorders. ISSN 2005-940X (In Press)

Dutta, Usha and Suttur, M.S. and Vineeth, V.S. and Laxmi Priyanka, P. and Sravani, G. and Talwar, S. and Suhana, A. and Sushmita, B. and Rachel, J.A. and Dalal, Ashwin (2020) Cytogenetic and molecular study of 370 infertile men in South India highlighting the importance of copy number variations by multiplex ligation‐dependent probe amplification. Andrologia. ISSN 0303-4569 (In Press)

Sugeedha, Jeyapal and Gautam, Jyoti and Tyagi, Shweta (2020) SET1/MLL Family of Proteins: Functions beyond histone methylation. Epigenetics. ISSN 1559-2294 (In Press)

Bakshi, Asif and Joshi, Rohit (2020) Role of glial niche in regulating neural stem cell proliferation in Drosophila central nervous system. Journal of Neuroscience Research. ISSN 0360-4012 (In Press)

Dhanya Lakshmi, N. and Ranganath, P. and Aggarwal , Shagun and Dalal, Ashwin and Phadke, S.R. and Mandal, K. (2019) Computer-aided Facial Analysis in Diagnosing Dysmorphic Syndromes in Indian Children. Indian Pediatrics, 56 (12). pp. 1017-1019. ISSN 0019-6061

Pal, Kamalendu and Yadav, Malti and Jain, Sriyans and Ghosh, Biplab and Sen, Ranjan and Sen, Udayaditya (2019) Vibrio cholerae YaeO is a structural homologue of RNA chaperone Hfq that inhibits Rho-dependent transcription termination by dissociating its hexameric state. Journal of Molecular Biology, 431 (24). pp. 4749-4766. ISSN 0022-2836

Trivedi, Jay and Parveen, A. and Rozy, F. and Mitra, Alapani and Bal, Chandralata and Mitra, Debashis and Sharon, A. (2019) Discovery of 2-isoxazol-3-yl-acetamide analogues as heat shock protein 90 (HSP90) inhibitors with significant anti-HIV activity. European Journal of Medicinal Chemistry, 183. p. 111699. ISSN 0223-5234

Wahl, M.C. and Sen, Ranjan (2019) Exploiting phage strategies to modulate bacterial transcription. Transcription, 10 (4-5). pp. 222-230. ISSN 2154-1264

Kasbekar, D.P. (2019) A cross-eyed geneticist’s view V. How Sydney Brenner, Leslie Barnett, Eugene Katz, and Francis Crick inferred that UGA is a nonsense codon. Journal of Biosciences, 44 (6). pp. 134-135. ISSN 0250-5991

Trivedi, Rakesh and Nagarajaram, H.A. (2019) Amino acid substitution scoring matrices specific to intrinsically disordered regions in proteins. Scientific Reports, 9. p. 16380. ISSN 2045-2322

Ghosh, D.K. and Ranjan, Akash (2019) An IRES-dependent translation of HYPK mRNA generates a truncated isoform of the protein that lacks the nuclear localization and functional ability. RNA Biology, 16 (11). pp. 1604-1621. ISSN 1547-6286

Delma, C.R. and Thirugnanasambandan, S. and Srinivasan, G.P. and Raviprakash, N. and Manna, S.K. and Natarajan, M. and Aravindan, N. (2019) Fucoidan from marine brown algae attenuates pancreatic cancer progression by regulating p53 - NFκB crosstalk. Phytochemistry, 167. p. 112078. ISSN 0031-9422

Tyagi, Rahul and Kumar, Sumit and Dalal, Ashwin and Mohammed, Faruq and Mohanty, Manju and Kaur, Paramvir and Anand , Akshay (2019) Repurposing Pathogenic Variants of DMD Gene and its Isoforms for DMD Exon Skipping Intervention. Current Genomics, 20 (7). pp. 519-530. ISSN 1389-2029

Jha, V. and Nagender Rao, R. and Janardhan, S. and Raman, Rajeev and Sastry, G.N. and Sharma, Vartika and Subba Rao, J. and Kumar, Dhiraj and Mukhopadhyay, Sangita (2019) Uncovering Structural and Molecular Dynamics of ESAT-6:β2M Interaction: Asp53 of Human β2-Microglobulin Is Critical for the ESAT-6:β2M Complexation. The Journal of Immunology, 203 (7). pp. 1918-1929. ISSN 0022-1767

Sanyal, Rajeshree and Singh, Vani and Harinarayanan, R. (2019) A novel gene contributing to the initiation of fatty acid biosynthesis in Escherichia coli. Journal of Bacteriology, 201 (19). e00354-19. ISSN 0021-9193

Dhanya Lakshmi, N. and Ranganath, P. and Balakrishnan, S. and Dalal, Ashwin (2019) Mosaic paternal uniparental isodisomy of 15q11-q13 region causing Angelman phenotype. Clinical Dysmorphology, 28 (4). pp. 202-204. ISSN 0962-8827

Meccariello, A. and Salvemini, M. and Primo, P. and Hall, B. and Koskinioti, P. and Dalíková, M. and Gravina, A. and Gucciardino, M.A. and Forlenza, F. and Gregoriou, M.-E. and Ippolito, D. and Monti, S.M. and Petrella, V. and Perrotta, M.M. and Schmeing, S. and Ruggiero, A. and Scolari, F. and Giordano, E. and Tsoumani, K.T. and Marec, F. and Windbichler, N. and Arunkumar, K.P. and Bourtzis, K. and Mathiopoulos, K.D. and Ragoussis, J. and Vitagliano, L. and Tu, Z. and Papathanos, P.A. and Robinson, M.D. and Saccone, G. (2019) Maleness-on-the-Y (MoY) orchestrates male sex determination in major agricultural fruit fly pests. Science, 365 (6460). pp. 1457-1460. ISSN 0036-8075

Samal, Biswajit and Chatterjee, Subhadeep (2019) New insight into bacterial social communication in natural host: Evidence for interplay of heterogeneous and unison quorum response. PLOS Genetics, 15 (9). p. 1008395. ISSN 1553-7404

Srivastava, Shruti and Madhu Babu, B. and Khan, M.Z. and Vinay Kumar, N. and Mukhopadhyay, Sangita (2019) Mycobacterium tuberculosis PPE2 Protein Interacts with p67phox and Inhibits Reactive Oxygen Species Production. Journal of Immunology, 203 (5). pp. 1218-1229. ISSN 0022-1767

Dutta, Usha and Rao, S.N. and Vijaya Kumar, P. and Vineeth, V.S. and Bhattacherjee, Amrita and Das Bhowmik, A. and Ramaswamy, S.K. and Singh, K.G. and Dalal, Ashwin (2019) Breakpoint mapping of a novel de novo translocation t(X;20)(q11.1;p13) by positional cloning and long read sequencing. Genomics, 111 (5). pp. 1108-1114. ISSN 0888-7543

Bhattacherjee, Amrita and Ranganath, P. and Divya, Pasumarthi and Dalal, Ashwin (2019) Identification and in-silico analysis of a novel disease-causing variant in the GUSB gene for Mucopolysaccharidosis VII presenting as non-immune fetal hydrops. Gene Reports, 16. p. 100437. ISSN 2452-0144

Nerakh, Gayatri and Tandon, A. and Dalal, Ashwin and Aggarwal, Shagun (2019) Exome Sequencing Identifies RET Associated Hirschsprung Disease in a Fetus with Echogenic Bowel. Journal of Fetal Medicine, 6 (3). pp. 151-154. ISSN 2348-1153

Choudhary, D.K. and Bhakt, Priyanka and Kaur, Rupinder (2019) An essential role for the PI(3,5)P2 synthesis complex in caspofungin tolerance and virulence in Candida glabrata. Antimicrobial Agents and Chemotherapy, 63 (8). e00886-19. ISSN 0066-4804

Vignesh, Pandiarajan and Sharma, Madhubala and Pilania, R.K. and Shandilya, J.K. and Kaur, Anit and Goel, Shubham and Kaur, Anupriya and Suri, Deepti and Rawat, Amit and Dalal, Ashwin and Sarma, A.S. and Singh, Surjit (2019) Myriad Faces of Chronic Granulomatous Disease: All in an Indian Family with Novel CYBB Defect. Journal of Clinical Immunology, 39 (6). pp. 611-615. ISSN 0271-9142

Ghosh, Neha and Bakshi, Asif and Khandelwal, Risha and Govinda Rajan, S. and Joshi, Rohit (2019) Hox gene Abdominal-B uses DoublesexF as a cofactor to promote neuroblast apoptosis in Drosophila central nervous system. Development, 146 (16). e175158. ISSN 0950-1991

Karthik, T. and Ranganath, P. and Ramachandran, A. and Uppin, M.S. and Sreeja, P. and Aggarwal, Shagun and Lakshmi, D. and Meena, A.K. and Dalal, Ashwin (2019) Molecular and Histopathological Characterization of Patients Presenting with the Duchenne Muscular Dystrophy Phenotype in a Tertiary Care Center in Southern India. Indian Pediatrics, 56 (7). pp. 556-559. ISSN 0019-6061

Bashyam, M.D. and Srinivas, A. and Pratyusha, B. and Ashmala, N. and Sara , A.G. (2019) The Yin and Yang of cancer genes. Gene, 704. pp. 121-133. ISSN 0378-1119

Singh, Shweta and Godavarthi, Sapna and Kumar, Amit and Sen, Ranjan (2019) A mycobacteriophage genomics approach to identify novel mycobacteriophage proteins with mycobactericidal properties. Microbiology , 165 (7). pp. 722-736. ISSN 1350-0872

Ramasarma, T. and Vaigundan, D. (2019) Pathways of electron transfer and proton translocation in the action of superoxide dismutase dimer. Biochemical and Biophysical Research Communications, 514 (3). pp. 772-776. ISSN 0006-291X

Raghunathan, Nalini and Goswami, S. and Leela, J.K. and Pandiyan, A. and Gowrishankar, J. (2019) A new role for Escherichia coli Dam DNA methylase in prevention of aberrant chromosomal replication. Nucleic Acids Research, 47 (11). pp. 5698-5711. ISSN 0305-1048

Dutta, Usha and Swamy, Venugopala and Rajitha, Ponnala and Aggarwal, Shagun and Dalal, Ashwin (2019) Determining the Cause of Recurrent Miscarriages in a Couple: Importance of NOR in the Era of NGS. Journal of Reproduction and Infertility, 20 (2). pp. 109-114. ISSN 2228-5482

Kasbekar, D.P. (2019) A cross-eyed geneticist’s view III. Mouse chromosomes take a drive. Journal of Biosciences, 44 (2). p. 51. ISSN 0250-5991

Bashyam, M.D. and Srinivas, A. and Pratyusha, B. (2019) Taming the Master: SWI/SNF chromatin remodeller as a therapeutic target in cancer. Current Science , 116 (10). pp. 1653-1665. ISSN 0011-3891

Deota, S. and Rathnachalam, S. and Namrata, K. and Boob, M. and Fulzele, A. and Radhika, S. and Ganguli, S. and Balaji, C. and Kaypee, S. and Vishwakarma, K.K. and Kundu, T.K. and Bhandari, Rashna and de Peredo, A.G. and Mishra, M. and Venkatramani, R. and Kolthur-Seetharam, U. (2019) Allosteric Regulation of Cyclin-B Binding by the Charge State of Catalytic Lysine in CDK1 Is Essential for Cell Cycle Progression. Journal of Molecular Biology, 431 (11). pp. 2127-2142. ISSN 0022-2836

Kumar, Abhishek and Ghosh, D.K. and Ali, J. and Ranjan, Akash (2019) Characterization of lipid binding properties of Plasmodium falciparum acyl-CoA binding proteins and their competitive inhibition by mefloquine. ACS Chemical Biology, 14 (5). pp. 901-915. ISSN 1554-8929

Ahmed, Asma and Dolasia, Komal and Mukhopadhyay, Sangita (2019) Mycobacterium tuberculosisPPE18 Protein Reduces Inflammation and Increases Survival in Animal Model of Sepsis. The Journal of Immunology, 200 (10). pp. 3587-3598. ISSN 0022-1767

Giri, D.A. and Pankajam, A.V. and Nishant, K.T. and Kasbekar, D.P. (2019) The Neurospora crassa Standard Oak Ridge Background Exhibits Atypically Efficient Meiotic Silencing by Unpaired DNA. G3 Genes Genomes Genetics, 9 (5). pp. 1487-1496. ISSN 2160-1836

Karthik, T. and Aggarwal, Shagun and Bhattacherjee, Amrita and Das Bhowmik, A. and Dalal, Ashwin (2019) Co-Occurrence of Leber Congenital Amaurosis and Meckel Syndrome Type 1 in a Fetus: Is There a Lesson to Be Learned? Molecular Syndromology, 10 (3). pp. 177-182. ISSN 1661-8769

Pradhan, Gourango and Abraham, P.R. and Shrivastava, Rohini and Mukhopadhyay, Sangita (2019) Calcium Signaling Commands Phagosome Maturation Process. International Reviews of Immunology, 38 (2). pp. 57-69. ISSN 0883-0185

Udgata, Atul and Dolasia, Komal and Ghosh, Sudip and Mukhopadhyay, Sangita (2019) Dribbling through the host defence: targeting the TLRs by pathogens. Critical Reviews in Microbiology, 45 (3). pp. 354-368. ISSN 1040-841X

Dhanya Lakshmi, N. and Matta, D. and Gupta, N. and Kabra, M. and Ranganath, P. and Aggarwal, Shagun and Phadke, S.R. and Datar, C. and Gowrishankar, K. and Kamate, M. and Jain, J.M.N. and Dalal, Ashwin (2019) Spectrum of ARSA variations in Asian Indian patients with Arylsulfatase A deficient metachromatic leukodystrophy. Journal of Human Genetics, 64 (4). pp. 323-331. ISSN 1434-5161

Kapshikar, R.M. and Gowrishankar, J. (2019) Direct inhibition of transcription in vitro by the isolated N-terminal domain of the Escherichia coli nucleoid-associated protein H-NS and by its paralogue Hha. Microbiology, 165 (4). pp. 463-474. ISSN 1350-0872

Singh, Jyoti and Steck, Nicole and De, Debaditya and Hofer, Alexandre and Ripp, Alexander and Captain, Ilya and Keller, Manfred and Wender, P.A. and Bhandari, Rashna and Jessen, H.J. (2019) A Phosphoramidite Analogue of Cyclotriphosphate Enables Iterative Polyphosphorylations. Angewandte Chemie International Edition, 58 (12). pp. 3928-3933. ISSN 1433-7851

Jain, Sriyans and Gupta, Richa and Sen, Ranjan (2019) Rho-dependent transcription termination in bacteria recycles RNA polymerases stalled at DNA lesions. Nature Communications, 10. p. 1207. ISSN 2041-1723

Ramasarma, T. and Vaigundan, D. (2019) Connecting CuA with metal centers of heme a, heme a, CuB and Zn by pathways with hydrogen bond as the bridging element in cytochrome c oxidase. Biochemical and Biophysical Research Communications, 510 (2). pp. 261-265. ISSN 0006-291X

Ramasarma, T. and Vaigundan, D. (2019) Hydrogen bond-linked pathways of peptide units and polar groups of amino acid residues suitable for electron transfer in cytochrome c proteins. Molecular and Cellular Biochemistry, 453 (1-2). pp. 197-203. ISSN 0300-8177

Nerakh, Gayatri and Ranganath, P. (2019) Alström Syndrome Presenting as Isolated Dilated Cardiomyopathy. The Indian Journal of Pediatrics, 86 (3). pp. 296-298. ISSN 0019-5456

Gudla, R. and Konduru, G.V. and Nagarajaram, H.A. and Siddavattam, D. (2019) Organophosphate hydrolase interacts with Ton components and is targeted to the membrane only in the presence of the ExbB/ExbD complex. FEBS Letters, 593 (6). pp. 581-593. ISSN 0014-5793

Chhakchhuak, P.I.R. and Khatri, Ajay and Sen, Ranjan (2019) Mechanism of Action of Bacterial Transcription Terminator Rho. Proceedings of the Indian National Science Academy, 85 (1). pp. 157-168. ISSN 0370-0046

Sheth, J. and Bhavsar, R. and Mistri, M. and Pancholi, D. and Bavdekar, A. and Dalal, Ashwin and Ranganath, P. and Girisha, K.M. and Shukla, A. and Phadke, S.R. and Puri, R. and Panigrahi, I. and Kaur, A. and Muranjan, M. and Goyal, M. and Radha Ramadevi, A. and Shah, R. and Nampoothiri, S. and Danda, S. and Datar, C. and Kapoor, S. and Bhatwadekar, S. and Sheth, F. (2019) Gaucher disease: single gene molecular characterization of one-hundred Indian patients reveals novel variants and the most prevalent mutation. BMC Medical Genetics, 20 (1). p. 31. ISSN 1471-2350

Jain, Smita and Pucadyil, Thomas and Kotak, Sachin and Bhandari, Rashna and Mallik, Roop (2019) Impact of Young Investigators’ Meetings on life sciences research in India. Current Science, 116 (3). pp. 357-360. ISSN 0011-3891

Bera, Pradip and Brandão, Paula and Mondal, Gopinath and Santra, Ananyakumari and Jana, Abhimanyu and Mokhamatam, R.B. and Manna, S.K. and Mandal, T.K. and Bera, Pulakesh (2019) An unusual iminoacylation of 2-amino pyridyl thiazole: Synthesis, X-ray crystallography and DFT study of copper(II) amidine complexes and their cytotoxicity, DNA binding and cleavage study. Polyhedron, 159. pp. 436-445. ISSN 0277-5387

Thamban, Thushara and Sowpati, D.T. and Pai, Vaishnavo and Nithianandam, Vanitha and Abe, Takaya and Shioi, Go and Mishra, R.K. and Khosla, Sanjeev (2019) The putative Neuronatin imprint control region is an enhancer that also regulates the Blcap gene. Epigenomics, 11 (3). pp. 251-265. ISSN 1750-1911

Ramasarma, T. and Vaigundan, D. (2019) Pathways linked by hydrogen bonds with redox-dependent breaks implicated in electron transfer in human cytochrome c protein. Indian Journal of Biochemistry and Biophysics, 56 (1). pp. 46-52. ISSN 0301-1208

Kumar, Kundan and Askari, Fizza and Sahu, Mahima and Kaur, Rupinder (2019) Candida glabrata: A Lot More Than Meets the Eye. Microorganisms, 7 (2). p. 39. ISSN 2076-2607

Qureshi, R. and Nagender Rao, R. and Madhu Babu, B. and Mukhopadhyay, Sangita (2019) PPE65 of M. tuberculosis regulate pro-inflammatory signalling through LRR domains of Toll like receptor-2. Biochemical and Biophysical Research Communications, 508 (1). pp. 152-158. ISSN 0006-291X

Vineeth, V.S. and Das Bhowmik, A. and Balakrishnan, S. and Dalal, Ashwin and Aggarwal, Shagun (2019) Homozygous PCDH12 variants result in phenotype of cerebellar ataxia, dystonia, retinopathy, and dysmorphism. Journal of Human Genetics, 64 (1). pp. 183-189. ISSN 1434-5161

Kumar, Parveen and Tathe, Prajakta and Chaudhary, Neelam and Subba Reddy, Maddika (2019) PPM1G forms a PPP‐type phosphatase holoenzyme with B56δ that maintains adherens junction integrity. EMBO Reports, 20. e46965. ISSN 1469-221X

Kasbekar, D.P. (2019) A cross-eyed geneticist’s view IV. Neurospora genes and inversions collude to cheat Mendel. Journal of Biosciences, 44 (4). p. 83. ISSN 0250-5991

Karole, A.M. and Swathi, C. and Ali, Aamir and Kumari, Nidhi and Tyagi, Shweta (2018) Novel sub-cellular localizations and intra-molecular interactions may define new functions of Mixed Lineage Leukemia protein. Cell Cycle, 17 (24). pp. 2684-2696. ISSN 1538-4101

Taware, R. and Taunk, K. and Pereira, J.A.M. and Shirolkar, A. and Soneji, D. and Câmara, J.S. and Nagarajaram, H.A. and Rapole, S. (2018) Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites. Scientific Reports, 8 (1). p. 17725. ISSN 2045-2322

Das Bhowmik, A. and Dalal, Ashwin and Tandon, A. and Aggarwal, Shagun (2018) Exome sequencing identifies novel ACE splice-site variant in a fetus with renal tubular dysgenesis. Journal of Obstetrics and Gynaecology Research, 44 (12). pp. 2181-2185. ISSN 1341-8076

Ghosh, D.K. and Kumar, Abhishek and Ranjan, Akash (2018) Metastable states of HYPK-UBA domain's seeds drive the dynamics of its own aggregation. Biochimica et Biophysica Acta (BBA) - General Subjects, 1862 (12). pp. 2846-2861. ISSN 0304-4165

Kasbekar, D.P. (2018) A cross-eyed geneticist's view II. Riddles, wrapped in mysteries, inside... mealybugs. Journal of Biosciences, 43 (5). pp. 819-822. ISSN 0973-7138

Das Bhowmik, A. and Karthik, T. and Uppin, M. and Sundaram, C. and Dalal, Ashwin (2018) Targeted next generation sequencing reveals novel splice site mutations in COL6A3 gene in a patient with congenital muscular dystrophy. Neurology India, 66 (6). pp. 1812-1814. ISSN 0028-3886

Abraham, P.R. and Devalraju, K.P. and Jha, V. and Valluri, V.L. and Mukhopadhyay, Sangita (2018) PPE17 (Rv1168c) protein of Mycobacterium tuberculosis detects individuals with latent TB infection. PLOS ONE, 13 (11). e0207787. ISSN 1932-6203

Verma, Raj Kumar and Samal, Biswajit and Chatterjee, Subhadeep (2018) Xanthomonas oryzae pv. oryzae chemotaxis components and chemoreceptor Mcp2 is involved in sensing constituent of xylem sap and contribute to regulation of virulence associated functions and entry into rice. Molecular Plant Pathology, 19 (11). pp. 2397-2415. ISSN 1464-6722

Bhakt, Priyanka and Shivarathri, R. and Choudhary, D.K. and Borah, S. and Kaur, Rupinder (2018) Fluconazole-induced actin cytoskeleton remodeling requires phosphatidylinositol 3-phosphate 5-kinase in the pathogenic yeast Candida glabrata. Molecular Microbiology, 110 (3). pp. 425-443. ISSN 0950-382X

Ramasarma, T. and Vaigundan, D. (2018) Alternative pathway linked by hydrogen bonds connects heme-Fe of cytochrome c with subunit II-CuA of cytochrome a. Biochemical and Biophysical Research Communications, 505 (2). pp. 445-447. ISSN 0006-291X

Clarke, L. and Adduri, R.S.R. and Smyth, P. and Quinn, F. and Jeffers, M. and Dunne, B. and O'Leary, J. and McKiernan, S. and Vandenberghe, E. and Pyne, S. and Bashyam, M.D. and Sheils, O. and Flavin, R. (2018) Potentially important miRNAs in enteropathy-associated T-cell lymphoma pathogenesis: A pilot study. Leukemia Research Reports, 10. pp. 52-54. ISSN 2213-0489

Vineeth, V.S. and Dutta, Usha and Karthik, T. and Das Bhowmik, A. and Dalal, Ashwin (2018) Whole exome sequencing identifies a novel 5 Mb deletion at 14q12 region in a patient with global developmental delay, microcephaly and seizures. Gene, 673. pp. 56-60. ISSN 0378-1119

Soumya Rao, and Sharda, S. and Oddi, V. and Nandineni, M.R. (2018) The Landscape of Repetitive Elements in the Refined Genome of Chilli Anthracnose Fungus Colletotrichum truncatum. Frontiers in Microbiology, 9. p. 2367. ISSN 1664-302X

Jana, Abhimanyu and Brandão, Paula and Mondal, Gopinath and Bera, Pradip and Santra, Ananyakumari and Jana, A.D. and Mokhamatam, R.B. and Manna, S.K. and Bhattacharyya, Nandan and Bera, Pulakesh (2018) Synthesis, characterization, cytotoxicity effect and DNA cleavage study of symmetric dinuclear chloro and azido bridged copper(II) complexes of napthyl-pyrazole based ligand. Inorganica Chimica Acta, 482. pp. 621-634. ISSN 0020-1693

Pandey, S.S. and Patnana, P.K. and Padhi, Y. and Chatterjee, Subhadeep (2018) Low-iron conditions induces the hypersensitive reaction and pathogenicity hrp genes expression in Xanthomonas and is involved in modulation of hypersensitive response and virulence. Environmental Microbiology Reports, 10 (5). pp. 522-531. ISSN 1758-2229

Nagender Rao, R. and Singh, Parul and Ghosh, S. and Mukhopadhyay, Sangita (2018) Lipid metabolism and intracellular bacterial virulence: key to next-generation therapeutics. Future Microbiology, 13 (11). pp. 1301-1328. ISSN 1746-0913

Basu Baul, T.S. and Dutta, D. and Duthie, A. and Rocha, B.G.M. and Guedes da Silva, M.F.C. and Saurav, Shashank and Manna, S.K. (2018) Syntheses, Structural Snapshots, Solution Redox Properties, and Cytotoxic Performances of Designated Ferrocene Scaffolds Appended with Organostannyl(IV) benzoates en Route for Human Hepatic Carcinoma. Organometallics, 37 (18). pp. 2961-2979. ISSN 0276-7333

Gawali, Rakhi and Trivedi, Jay and Bhansali, Sujit and Bhosale, Raghunath and Sarkar, Dhiman and Mitra, Debashis (2018) Design, synthesis, docking studies and biological screening of 2-thiazolyl substituted -2,3-dihydro-1 H -naphtho[1,2-e][1,3]oxazines as potent HIV-1 reverse transcriptase inhibitors. European Journal of Medicinal Chemistry, 157. pp. 310-319. ISSN 0223-5234

Pradhan, Gourango and Shrivastva, Rohini and Mukhopadhyay, Sangita (2018) Mycobacterial PknG Targets the Rab7l1 Signaling Pathway To Inhibit Phagosome–Lysosome Fusion. The Journal of Immunology, 201 (5). pp. 1421-1433. ISSN 0022-1767

Yousuf, S. and Rajendra Kumar, A. and Roy, Ajit and Gupta, S.K. and Misra, R. and Ranjan, Akash (2018) Mce2R/Rv0586 of Mycobacterium tuberculosis is the functional homologue of FadR E. coli. Microbiology, 164 (9). pp. 1133-1145. ISSN 1350-0872

Nagarajan, K. and Swamiappan, E. and Anbazhagan, S. and Dalal, Ashwin and Adithan, S. and Krings, T. (2018) “Twig-like” cerebral vessels are not pathognomonic for ACTA A2 mutations: A case report. Interventional Neuroradiology, 24 (4). pp. 463-468. ISSN 1591-0199

Li, S. and Ajimura, M. and Chen, Z. and Liu, J. and Chen, E. and Guo, H. and Vidya, T. and Gangi Reddy, C. and Zhang, J. and Kishino, H. and Abe, H. and Xia, Q. and Arunkumar, K.P. and Mita, K. (2018) A new approach for comprehensively describing heterogametic sex chromosomes. DNA Research, 25 (4). pp. 375-382. ISSN 1340-2838

Gupta, Pankaj and Zaidi, A.H. and Manna, S.K. (2018) Suppression of IKK, but not activation of p53 is responsible for cell death mediated by naturally occurring oxidized tetranortriterpenoid. Journal of Cellular Biochemistry, 119 (8). pp. 6828-6841. ISSN 0730-2312

Das Bhowmik, A. and Patil, S.J. and Deshpande, D.V. and Bhat, V. and Dalal, Ashwin (2018) Novel splice-site variant of UCHL1 in an Indian family with autosomal recessive spastic paraplegia-79. Journal of Human Genetics, 63 (8). pp. 927-933. ISSN 1434-5161

Ghosh, D.K. and Roy, Ajit and Ranjan, Akash (2018) The ATPase VCP/p97 functions as a disaggregase against toxic Huntingtin-exon1 aggregates. FEBS Letters, 592 (16). pp. 2680-2692. ISSN 0014-5793

Taunk, K. and Taware, R. and More, T.H. and Porto-Figueira, P. and Pereira, J.A.M. and Mohapatra, R. and Soneji, D. and Câmara, J.S. and Nagarajaram, H.A. and Rapole, S. (2018) A non-invasive approach to explore the discriminatory potential of the urinary volatilome of invasive ductal carcinoma of the breast. RSC Advances, 8 (44). pp. 25040-25050. ISSN 2046-2069

Aggarwal, Shagun and Das Bhowmik, A. and Tandon, A. and Dalal, Ashwin (2018) Exome sequencing reveals blended phenotype of double heterozygous FBN1 and FBN2 variants in a fetus. European Journal of Medical Genetics, 61 (7). pp. 399-402. ISSN 1769-7212

Cavaco, C. and Pereira, J.A.M. and Taunk, K. and Taware, R. and Rapole, S. and Nagarajaram, H.A. and Câmara, J.S. (2018) Screening of salivary volatiles for putative breast cancer discrimination: an exploratory study involving geographically distant populations. Analytical and Bioanalytical Chemistry, 410 (18). pp. 4459-4468. ISSN 1618-2642

Kumar, Raju and Kotapalli, V. and Naz, Ashmala and Gowrishankar, S. and Rao, S. and Pollack, J.R. and Bashyam, M.D. (2018) XPNPEP3 is a novel transcriptional target of canonical Wnt/β-catenin signalling. Genes, Chromosomes and Cancer, 57 (6). pp. 304-310. ISSN 1045-2257

Bakshi, Asif and Joshi, Rohit (2018) Understanding the regulation of neural stem cell proliferation in Drosophila central nervous system. Journal of Neuroscience Research, 96 (6). pp. 1119-1120. ISSN 0360-4012

Abhishek, S. and Nivya, M.A. and Naveen Kumar, N. and Deeksha, W. and Khosla, Sanjeev and Rajakumara, E. (2018) Biochemical and dynamic basis for combinatorial recognition of H3R2K9me2 by dual domains of UHRF1. Biochimie, 149. pp. 105-114. ISSN 0300-9084

Kasbekar, D.P. (2018) A cross-eyed geneticist’s view. Journal of Biosciences, 43 (2). pp. 235-237. ISSN 0250-5991

Chakraborty, S. and Shukla, S.P. and Arunkumar, K.P. and Nagaraju, J. and Gadagkar, R. (2018) Genetic relatedness does not predict the queen’s successors in the primitively eusocial wasp, Ropalidia marginata. Journal of Genetics, 97 (2). pp. 429-438. ISSN 0022-1333

Lahiri, K. and Shalini, A. and Raghavendra, V. and Haldar, Devyani (2018) Fission Yeast Sirtuin Hst4 Functions in Preserving Genomic Integrity by Regulating Replisome Component Mcl1. Scientific Reports, 8 (1). p. 8496. ISSN 2045-2322

Ahmed, Asma and Dolasia, Komal and Mukhopadhyay, Sangita (2018) Mycobacterium tuberculosisPPE18 Protein Reduces Inflammation and Increases Survival in Animal Model of Sepsis. Journal of Immunology, 200 (10). pp. 3587-3598. ISSN 0022-1767

Anwar, T. and Sen, B. and Aggarwal, S. and Nath, R. and Katoch, A. and Aiyaz, M. and Trehanpati, N. and Khosla, Sanjeev and Ramakrishna, Gayatri (2018) Differentially regulated gene expression in quiescence vs. senescence and identification of ARID5A as a quiescence associated marker. Journal of Cellular Physiology, 233 (5). pp. 3695-3712. ISSN 0021-9541

Behera, S. and Kapadia, B. and Vasundhara, K. and Neeraja, A.Y.P. and Vachana, M. and Kumar, S.T. and Prakash Babu, P. and Seshadri, S. and Shivarudraiah, P. and Hiriyan, J. and Narmadha Reddy, Gangula and Subba Reddy, Maddika and Misra, P. and Parsa, K.V.L. (2018) ERK1/2 activated PHLPP1 induces skeletal muscle ER stress through the inhibition of a novel substrate AMPK. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease, 1864 (5A). pp. 1702-1716. ISSN 0925-4439

Patil, S.J. and Das Bhowmik, A. and Bhat, V. and Venugopal, S.V. and Rashmi, V. and Dalal, Ashwin (2018) Autosomal recessive otofaciocervical syndrome type 2 with novel homozygous small insertion in PAX1 gene. American Journal of Medical Genetics Part A, 176 (5). pp. 1200-1206. ISSN 1552-4825

Singh, Parul and Nagender Rao, R. and Ghosh, Sudip and Mukhopadhyay, Sangita (2018) Cell envelope lipids in the pathophysiology of Mycobacterium tuberculosis. Future Microbiology, 13 (6). pp. 689-710. ISSN 1746-0913

Satyavathi, V.V. and Mohamed, A.A. and Swetha Kumari, and Mamatha, D.M. and Duvic, B. (2018) The IMD pathway regulates lysozyme-like proteins (LLPs) in the silkmoth Antheraea mylitta. Journal of Invertebrate Pathology, 154. pp. 102-108. ISSN 0022-2011

Rasheed, M. and Anamika, B. and Kaur, Rupinder (2018) Aspartyl proteases in Candida glabrata are required for suppression of the host innate immune response. Journal of Biological Chemistry, 293 (17). pp. 6410-6433. ISSN 0021-9258

Raghunathan, Nalini and Kapshikar, R.M. and Leela, J.K. and Mallikarjun, J. and Bouloc, P. and Gowrishankar, J. (2018) Genome-wide relationship between R-loop formation and antisense transcription in Escherichia coli. Nucleic Acids Research, 46 (7). pp. 3400-3411. ISSN 0305-1048

Shah, V.J. and Subba Reddy, Maddika (2018) CRL7SMU1 E3 ligase complex driven H2B ubiquitination functions in sister chromatid cohesion by regulating SMC1 expression. Journal of Cell Science, 131 (8). jcs213868. ISSN 0021-9533

Shah, V.J. (2018) First person – Varun Jayeshkumar Shah. Journal of Cell Science, 131 (8). jcs217794. ISSN 0021-9533

Ansari, M.Z. and Kumar, A. and Ahari, D. and Priyadarshi, A. and Padmavathi, L. and Bhandari, Rashna and Swaminathan, R. (2018) Protein Charge Transfer Absorption Spectra: An Intrinsic Probe to Monitor Structural and Oligomeric Transitions in Proteins. Faraday Discussions, 207. pp. 91-113. ISSN 1359-6640

Shinde, S.R. and Subba Reddy, Maddika (2018) Post translational modifications of Rab GTPases. Small GTPases, 9 (1-2). pp. 49-56. ISSN 2154-1248

Ghosh, D.K. and Roy, Ajit and Ranjan, Akash (2018) Disordered nanostructure in Huntingtin interacting protein K acts as stabilizing switch to prevent protein aggregation. Biochemistry, 57 (13). pp. 2009-2023. ISSN 0006-2960

Karthik, T. and Venugopal , V. and Dalal, Ashwin and Aggarwal, Shagun (2018) Novel RSPO1 mutation causing 46,XX testicular disorder of sex development with palmoplantar keratoderma: A review of literature and expansion of clinical phenotype. American Journal of Medical Genetics A, 176 (4). pp. 1006-1010. ISSN 1552-4825

Godbole, K.G. and Angelina, R. and Karkamkar, A.S. and Dalal, Ashwin (2018) Compound Heterozygosity for Hb Alperton (HBB: c.407C>T) and IVS-I-5 (G>C) (HBB: c.92+5G>C) Mutations Presenting as a Moderate Anemia in an Indian Family. Hemoglobin, 42 (2). pp. 141-142. ISSN 0363-0269

Ansari, M.Z. and Kumar, A. and Ahari, D. and Priyadarshi, A. and Padmavathi, L. and Bhandari, Rashna and Swaminathan, R. (2018) Protein Charge Transfer Absorption Spectra: An Intrinsic Probe to Monitor Structural and Oligomeric Transitions in Proteins. Biophysical Journal, 114 (3). 586a. ISSN 0006-3495

Mistri, M.A. and Dalal, Ashwin and Nath, P. and Nampoothiri, S. and Mehta, S. and Singh, A. and Sheth, F. and Sheth, J. (2018) Identification of novel and known mutation in 19 patients with mucolipidosis type II and III from India and validation of novel method of screening for mucolipidosis-II and III screening. Molecular Genetics and Metabolism, 123 (2). s96. ISSN 1096-7192

Sarkar, A. and Nandineni, M.R. (2018) Association of common genetic variants with human skin color variation in Indian populations. American Journal of Human Biology, 30 (1). e23068. ISSN 1042-0533

Kumar, Raju and Raman, R. and Kotapalli, V. and Gowrishankar, S. and Pyne, S. and Pollack, J.R. and Bashyam, M.D. (2018) Ca2+/nuclear factor of activated T cells signaling is enriched in early-onset rectal tumors devoid of canonical Wnt activation. Journal of Molecular Medicine, 96 (2). pp. 135-146. ISSN 0946-2716

Dolasia, Komal and Bisht, M.K. and Pradhan, Gourango and Udgata, Atul and Mukhopadhyay, Sangita (2018) TLRs/NLRs: Shaping the landscape of host immunity. International Reviews of Immunology, 37 (1). pp. 3-19. ISSN 0883-0185

Aggarwal, Shagun and Tandon, A. and Das Bhowmik, A. and Dalal, Ashwin (2018) Autopsy findings in EPG5-related Vici syndrome with antenatal onset: Additional report of Focal cortical microdysgenesis in a second trimester fetus. American Journal of Medical Genetics Part A, 176 (2). pp. 499-501. ISSN 1552-4825

Puri, R.D. and Kapoor, S. and Kishnani, P.S. and Dalal, Ashwin and Gupta, N. and Muranjan, M. and Phadke, S.R. and Sachdeva, A. and Verma, I.C. and Mistry, P.K. (2018) Diagnosis and Management of Gaucher Disease in India - Consensus Guidelines of the Gaucher Disease Task Force of the Society for Indian Academy of Medical Genetics and the Indian Academy of Pediatrics. Indian Pediatrics, 55 (2). pp. 143-153. ISSN 0019-6061

Yaseen, Imtiyaz and Choudhury, Mitali and Sritharan, Manjula and Khosla, Sanjeev (2018) Histone methyltransferase SUV39H1 participates in host defense by methylating mycobacterial histone‐like protein HupB. The EMBO Journal, 37 (2). pp. 183-200. ISSN 1460-2075

Aggarwal, Shagun and Tandon, A. and Das Bhowmik, A. and Jain, J.M.N. and Dalal, Ashwin (2018) A Dysmorphology Based Systematic Approach Toward Perinatal Genetic Diagnosis in a Fetal Autopsy Series. Fetal and Pediatric Pathology, 37 (1). pp. 49-68. ISSN 1551-3815

Zargar, Z.U. and Mallikharjuna Rao, K. and Tyagi, Shweta (2018) Dynamic site-specific recruitment of RBP2 by pocket protein p130 modulates H3K4 methylation on E2F-responsive promoters. Nucleic Acids Research, 46 (1). pp. 174-188. ISSN 0305-1048

Ram, B.M. and Jayashree, D. and Kulkarni, R. and Usha, R. and Usha, B. and Usha Rani, P. and Islam, M. and Trehanpati, N. and Ramakrishna, Gayatri (2018) Human papillomavirus (HPV) oncoprotein E6 facilitates Calcineurin-Nuclear factor for activated T cells 2 (NFAT2) signaling to promote cellular proliferation in cervical cell carcinoma. Experimental Cell Research, 362 (1). pp. 132-141. ISSN 0014-4827

Sengupta, Amrita and Haldar, Devyani (2018) Human sirtuin 3 (SIRT3) deacetylates histone H3 lysine 56 to promote nonhomologous end joining repair. DNA Repair, 61. pp. 1-16. ISSN 1568-7864

Dhanya Lakshmi, N. and Deshpande, D. and Das Bhowmik, A. and Varma, D.R. and Dalal, Ashwin (2018) Familial choreoathetosis due to novel heterozygous mutation in PDE10A. American Journal of Medical Genetics Part A, 176 (1). pp. 146-150. ISSN 1552-4825

Rajendra Kumar, A. and Yousuf, S. and Gupta, S.K. and Ranjan, Akash (2018) An IclR like protein from mycobacteria regulates leuCD operon and induces dormancy-like growth arrest in Mycobacterium smegmatis. Tuberculosis, 108. pp. 83-92. ISSN 1472-9792

Raghavendra, V. and Haldar, Devyani (2018) Mammalian target of rapamycin complex 2 (mTORC2) controls glycolytic gene expression by regulating Histone H3 Lysine 56 acetylation. Cell Cycle, 17 (1). pp. 110-123. ISSN 1538-4101

Das Bhowmik, A. and Vijayalakshmi, S.R. and Dalal, Ashwin (2018) Tarsal-carpal coalition syndrome: Report of a novel missense mutation in NOG gene and phenotypic delineation. American Journal of Medical Genetics Part A, 176 (1). pp. 219-224. ISSN 1552-4825

Kar, Anjana and Phadke, S.R. and Das Bhowmik, A. and Dalal, Ashwin (2018) Whole exome sequencing reveals a mutation in ARMC9 as a cause of mental retardation, ptosis, and polydactyly. American Journal of Medical Genetics Part A, 176 (1). pp. 34-40. ISSN 1552-4825

Sreegowrinadh, J. and Pandey, S.S. and Mishra, Amita and Pradhan, B.B. and Chatterjee, Subhadeep (2018) Bacterial cyclic β‐(1,2)‐glucans sequester iron to protect against iron‐induced toxicity. EMBO reports, 19. pp. 172-186. ISSN 1469-3178

Shukla, A. and Das Bhowmik, A. and Hebbar, Malavika and Rajagopal, K.V. and Girisha, K.M. and Gupta, N. and Dalal, Ashwin (2018) Homozygosity for a nonsense variant in AIMP2 is associated with a progressive neurodevelopmental disorder with microcephaly, seizures, and spastic quadriparesis. Journal of Human Genetics, 63 (1). pp. 19-25. ISSN 1434-5161

Ghosh, Gairika and Reddy, Jayavardhana and Sambhare, Susmit and Sen, Ranjan (2018) A Bacteriophage Capsid Protein Is an Inhibitor of a Conserved Transcription Terminator of Various Bacterial Pathogens. Journal of Bacteriology, 200 (1). e00380-17. ISSN 0021-9193

Ghosh, D.K. and Roy, Ajit and Ranjan, Akash (2018) Aggregation-prone regions in HYPK help it to form sequestration complex for toxic protein aggregates. Journal of Molecular Biology, 430 (7). pp. 963-986. ISSN 0022-2836

Singh, Mugdha and Sarkar, A. and Nandineni, M.R. (2018) A comprehensive portrait of Y-STR diversity of Indian populations and comparison with 129 worldwide populations. Scientific Reports, 8. p. 15421. ISSN 2045-2322

Verma, N. and Manna, S.K. (2017) Advanced Glycation End Products (AGE) Potentiates Cell Death in p53 Negative Cells via Upregulaion of NF-kappa B and Impairment of Autophagy. Journal of Cellular Physiology, 232 (12). pp. 3598-3610. ISSN 0021-9541

Kumar, Raju and Bashyam, M.D. (2017) Multiple oncogenic roles of nuclear β-catenin. Journal of Biosciences, 42 (4). pp. 695-707. ISSN 0250-5991

Shinde, S.R. and Subba Reddy, Maddika (2017) PTEN Regulates Glucose Transporter Recycling by Impairing SNX27 Retromer Assembly. Cell Reports, 21 (6). pp. 1655-1666. ISSN 2211-1247

Cheng, T. and Wu, J. and Wu, Y. and Rajendra, C.V. and Huang, L. and Yamamoto, K. and Feng, Li and Li, W. and Chen, Z. and Guo, H. and Liu, J. and Li, S. and Wang, X. and Peng, Li and Liu, D. and Guo, Y. and Fu, B. and Li, Z. and Liu, C. and Chen, Y. and Tomar, A. and Hilliou, F. and Montagné, N. and Jacquin-Joly, E. and d’Alençon, E. and Seth, R.K. and Bhatnagar, R.K. and Jouraku, A. and Shiotsuki, T. and Kadono-Okuda, K. and Promboon, A. and Smagghe, G. and Arunkumar, K.P. and Kishino, H. and Goldsmith, M.R. and Feng, Q. and Xia, Q. and Mita, K. (2017) Genomic adaptation to polyphagy and insecticides in a major East Asian noctuid pest. Nature Ecology & Evolution, 1 (11). pp. 1747-1756. ISSN 2397-334X

Khandelwal, Risha and Sipani, Rashmi and Sriivatsan, G.R. and Kumar, Raviranjan and Joshi, Rohit (2017) Combinatorial action of Grainyhead, Extradenticle and Notch in regulating Hox mediated apoptosis in Drosophila larval CNS. PLOS Genetics, 13 (10). e1007043. ISSN 1553-7404

Taware, R. and Taunk, K. and Pereira, J.A.M. and Dhakne, R. and Kannan, N. and Soneji, D. and Camara, J.S. and Nagarajaram, H.A. and Srikanth, R. (2017) Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosis. Metabolomics, 13. p. 111. ISSN 1573-3882

Sarkar, A. and Stoneking, Mark and Nandineni, M.R. (2017) Unraveling the human salivary microbiome diversity in Indian populations. PLoS ONE, 12 (9). e0184515. ISSN 1932-6203

Malla, A.B. and Bhandari, Rashna (2017) IP6K1 is essential for chromatoid body formation and temporal regulation of TNP2 and PRM2 expression in mouse spermatids. Journal of Cell Science, 130 (17). pp. 2854-2866. ISSN 0021-9533

Malla, A.B. (2017) First person - Aushaq Bashir Malla. Journal of Cell Science, 130 (17). pp. 2769-2770. ISSN 0021-9533

Pandey, S.S. and Patnana, P.K. and Rai, Rikky and Chatterjee, Subhadeep (2017) Xanthoferrin, the α-hydroxy carboxylate type siderophore ofXanthomonas campestrispv.campestrisis required for optimum virulence and growth inside cabbage. Molecular Plant Pathology, 18 (7). pp. 949-962. ISSN 1464-6722

Dutta, Usha and Bahal, Ashish and Vineeth, V.S. and Vasantha, S. and Ranganath, P. and Dalal, Ashwin (2017) A novel mosaic complex supernumerary marker chromosome in a girl with seizures: Systematic characterization of the complex marker. Gene Reports, 8. pp. 128-133. ISSN 2452-0144

Jagadisan, B. and Ranganath, P. (2017) Glycogen Storage Disease Type VI With a Novel Mutation in PYGL Gene. Indian Pediatrics, 54 (9). pp. 775-776. ISSN 0019-6061

Mitra, Pallabi and Ghosh, Gairika and Hafeezunnisa, Md. and Sen, Ranjan (2017) Rho Protein: Roles and Mechanisms. Annual Review of Microbiology, 71 (1). pp. 687-709. ISSN 0066-4227

Soumya Rao, and Nandineni, M.R. (2017) Genome sequencing and comparative genomics reveal a repertoire of putative pathogenicity genes in chilli anthracnose fungus Colletotrichum truncatum. PLoS ONE, 12 (8). e0183567. ISSN 1932-6203

Narmadha Reddy, Gangula and Subba Reddy, Maddika (2017) Interplay between the phosphatase PHLPP1 and an E3 ligase RNF41 stimulates proper kinetochore assembly via the outer-kinetochore protein SGT1. Journal of Biological Chemistry, 292 (34). pp. 13947-13958. ISSN 0021-9258

Kasbekar, D.P. (2017) Pushpa Mittra Bhargava (1928–2017). Current Science, 113 (4). pp. 807-808. ISSN 0011-3891

Karthik, T. and Ranganath, P. and Dalal, Ashwin (2017) Variable expressivity and response to bisphosphonate therapy in a family with osteoporosis pseudoglioma syndrome. Indian Pediatrics, 54 (8). pp. 681-683. ISSN 0019-6061

Kumar, Parveen and Prathyusha, M. and Chowdary, K.V.S.R. and Shah, V.J. and Shinde, S.R. and Kolli, N.R. and Rachita, H.R. and Nagarajaram, H.A. and Subba Reddy, Maddika (2017) A human tyrosine phosphatase interactome mapped by proteomic profiling. Journal of Proteome Research, 16 (8). pp. 2789-2801. ISSN 1535-3893

Pandey, S.S. and Singh, Prashantee and Samal, Biswajit and Verma, Raj Kumar and Chatterjee, Subhadeep (2017) Xanthoferrin Siderophore Estimation from the Cell-free Culture Supernatants of Different Xanthomonas Strains by HPLC. BIO-PROTOCOL, 7 (14). e2410. ISSN 2331-8325

Gopinath, G. and Srikeerthana, K. and Tomar, A. and Sekhar, S.M.C. and Arunkumar, K.P. (2017) RNA sequencing reveals a complete but an unconventional type of dosage compensation in the domestic silkworm Bombyx mori. Royal Society Open Science, 4 (7). p. 170261. ISSN 2054-5703

Singh, Mugdha and Nandineni, M.R. (2017) Population genetic analyses and evaluation of 22 autosomal STRs in Indian populations. International Journal of Legal Medicine, 131 (4). pp. 971-973. ISSN 0937-9827

Ghosh, Ananga and Sengupta, Amrita and Pavan Kumar, S.G. and Ali, Nakhi and Rama Rao, E.V.V.S. and Bung, Navneet and Gopalakrishnan, Bulusu and Pal, Manojit and Haldar, Devyani (2017) A novel SIRT1 inhibitor, 4bb induces apoptosis in HCT116 human colon carcinoma cells partially by activating p53. Biochemical and Biophysical Research Communications, 488 (3). pp. 562-569. ISSN 0006-291X

Kasbekar, D.P. (2017) Ascus dysgenesis in hybrid crosses of Neurospora and Sordaria (Sordariaceae). Journal of Genetics, 96 (3). pp. 457-463. ISSN 0022-1333

Abraham, P.R. and Pathak, Niteen and Pradhan, Gourango and Latha, G.S. and Mukhopadhyay, Sangita (2017) The N-terminal domain of Mycobacterium tuberculosis PPE17 (Rv1168c) protein plays a dominant role in inducing antibody responses in active TB patients. PLoS One, 12 (6). e0179965. ISSN 1932-6203

Ali, Aamir and Sailaja, N.V. and Chinchole, Akash and Tyagi, Shweta (2017) MLL/WDR5 Complex Regulates Kif2A Localization to Ensure Chromosome Congression and Proper Spindle Assembly during Mitosis. Developmental Cell, 41 (6). 605-622.e7. ISSN 15345807

Rachana, R.D. and Ganji, Rakesh and Singh, S.P. and Mahalingam, S. and Banerjee, Sharmistha and Khosla, Sanjeev (2017) Cytosine methylation by DNMT2 facilitates stability and survival of HIV-1 RNA in the host cell during infection. Biochemical Journal, 474 (12). pp. 2009-2026. ISSN 0264-6021

Deborah, D.A. and Vemireddy, L.R. and Roja, V. and Patil, S. and Choudhary, G.P. and Noor, S. and Srividhya, A. and Kaliappan, A. and Sandhya Rani, B. and Satyavathi, V.V. and Anuradha, G. and Radhika, K. and Yamini, K.N. and Gopalakrishna , M.K. and Ranjith Kumar, N. and Siddiq, E.A. and Nagaraju, J. (2017) Molecular dissection of QTL governing grain size traits employing association and linkage mapping in Basmati rice. Molecular Breeding, 37 (6). p. 77. ISSN 1380-3743

Mukhopadhyay, Sangita and Ghosh, Sudip (2017) Mycobacterium tuberculosis: what is the role of PPE2 during infection? Future Microbiology, 12 (6). pp. 457-460. ISSN 1746-0913

Das Bhowmik, A. and Gupta, N. and Dalal, Ashwin and Kabra, M. (2017) Whole exome sequencing identifies a homozygous nonsense variation in ALMS1 gene in a patient with syndromic obesity. Obesity Research & Clinical Practice, 11 (2). pp. 241-246. ISSN 1871-403X

Himabindu, P. and Anupama, K. (2017) Decreased expression of stable RNA can alleviate the lethality associated with RNase E deficiency in Escherichia coli. Journal of Bacteriology, 199 (8). e00724-16. ISSN 0021-9193

Satyavathi, V.V. and Ghosh, Rupam and Srividya, S. (2017) Long Non-Coding RNAs Regulating Immunity in Insects. Non-Coding RNA, 3 (1). p. 14. ISSN 2311-553X

Sarkar, A. and Nandineni, M.R. (2017) Development of a SNP-based panel for human identification for Indian populations. Forensic Science International: Genetics, 27. pp. 58-66. ISSN 1872-4973

Baul, T.S.B. and Kehie, P. and Duthie, A. and Guchhait, N. and Raviprakash, N. and Mokhamatam, R.B. and Manna, S.K. and Armata, N. and Scopelliti, M. and Wang, R. and Englert, U. (2017) Synthesis, photophysical properties and structures of organotin- Schiff bases utilizing aromatic amino acid from the chiral pool and evaluation of the biological perspective of a triphenyltin compound. Journal of Inorganic Biochemistry, 168. pp. 76-89. ISSN 0162-0134

Ali, Aamir and Tyagi, Shweta (2017) Diverse roles of WDR5-RbBP5-ASH2L-DPY30 (WRAD) complex in the functions of the SET1 histone methyltransferase family. Journal of Biosciences, 42 (1). pp. 155-159. ISSN 0250-5991

Guo, H. and Cheng, T. and Chen, Z. and Jiang, L. and Guo, Y. and Liu, J. and Li, S. and Taniai, K. and Asaoka, K. and Kadono-Okuda, K. and Arunkumar, K.P. and Wu, J. and Kishino, H. and Zhang, H. and Seth, R.K. and Gopinathan, K.P. and Montagné, N. and Jacquin-Joly, E. and Goldsmith, M.R. and Xia, Q. and Mita, K. (2017) Expression map of a complete set of gustatory receptor genes in chemosensory organs of Bombyx mori. Insect Biochemistry and Molecular Biology, 82. pp. 74-82. ISSN 0965-1748

Kasbekar, D.P. and Rekha, S. (2017) Neurospora tetrasperma crosses heterozygous for hybrid translocation strains produce rare eight-spored asci-bearing heterokaryotic ascospores. Journal of Biosciences, 42 (1). pp. 15-21. ISSN 0250-5991

Kasbekar, D.P. (2017) Sherlock Holmes, David Perkins, and the missing Neurospora inversions. Journal of Biosciences, 42 (1). pp. 5-10. ISSN 0250-5991

Raghavender, U.S. (2017) Analysis of residue conformations in peptides in Cambridge structural database and protein-peptide structural complexes. Chemical Biology & Drug Design, 89 (3). pp. 428-442. ISSN 17470277

Shah, Akruti and Ganguli, S. and Sen, J. and Bhandari, Rashna (2017) Inositol Pyrophosphates: Energetic, Omnipresent and Versatile Signalling Molecules. Journal of the Indian Institute of Science, 97 (1). pp. 23-40. ISSN 0970-4140

Kumar, Parveen and Subba Reddy, Maddika (2017) Cellular Dynamics Controlled by Phosphatases. Journal of the Indian Institute of Science, 97 (1). pp. 129-145. ISSN 0970-4140

Das Bhowmik, A. and Sarkar, Kanyakumarika and Ghosh, P. and Das, M. and Bhaduri, N. and Sarkar, Keka and Ray, A. and Sinha, S. and Mukhopadhyay, Kanchan (2017) Significance of Dopaminergic Gene Variants in the Male Biasness of ADHD. Journal of Attention Disorders, 21 (3). pp. 200-208. ISSN 1087-0547

Uttarilli, Anusha and Divya, Pasumarthi and Ranganath, P. and Dalal, Ashwin (2017) Functional characterization of arylsulfatase B mutations in Indian patients with Maroteaux-Lamy syndrome (mucopolysaccharidosis type VI). Gene, 599. pp. 19-27. ISSN 0378-1119

Bhat, K.H. and Srivastava, Shruti and Kumar, K.S and Ghosh, S. and Mukhopadhyay, Sangita (2017) The PPE2 protein of Mycobacterium tuberculosis translocates to host nucleus and inhibits nitric oxide production. Scientific Reports, 7. p. 39706. ISSN 2045-2322

Harms, F.L. and Girisha, K.M. and Hardigan, A.A. and Kortüm, F. and Shukla, A. and Alawi, M. and Dalal, Ashwin and Brady, L. and Tarnopolsky, M. and Bird, L.M. and Ceulemans, S. and Bebin, M. and Bowling, K.M. and Hiatt, S.M. and Lose, E.J. and Primiano, M. and Chung, W.K. and Juusola, J. and Akdemir, Z.C. and Bainbridge, M. and Charng, W.L. and Drummond-Borg, M. and Eldomery, M.K. and El-Hattab, A.W. and Saleh, M.A.M. and Bézieau, S. and Cogné, B. and Isidor, B. and Küry, S. and Lupski, J.R. and Myers, R.M. and Cooper, G.M. and Kutsche, K. (2017) Mutations in EBF3 Disturb Transcriptional Profiles and Cause Intellectual Disability, Ataxia, and Facial Dysmorphism. The American Journal of Human Genetics, 100 (1). pp. 117-127. ISSN 0002-9297

Chaudhary, A.K. and Mohapatra, R. and Nagarajaram, H.A. and Ranganath, P. and Dalal, Ashwin and Dutta, A. and Danda, S. and Girisha, K.M. and Bashyam, M.D. (2017) The novelEDARp.L397H missense mutation causes autosomal dominant hypohidrotic ectodermal dysplasia. Journal of the European Academy of Dermatology and Venereology, 31 (1). e17-e20. ISSN 0926-9959

Aparna, Y. and Kumari, M.D. and Prasanthi, S. and Jha, A. and Satyavathi, V.V. and Anitha, M. (2017) Effect of polyamines on mechanical and structural properties ofBombyx morisilk. Biopolymers, 107 (1). pp. 20-27. ISSN 0006-3525

Baul, T.S.B. and Dutta, D. and Duthie, A. and Guchhait, N. and Rocha, B.G.M. and da Silva, M.F.C.G. and Mokhamatam, R.B. and Raviprakash, N. and Manna, S.K. (2017) New dibutyltin(IV) ladders: Syntheses, structures and, optimization and evaluation of cytotoxic potential employing A375 (melanoma) and HCT116 (colon carcinoma) cell lines in vitro. Journal of Inorganic Biochemistry, 166 (1). pp. 34-48. ISSN 0162-0134

Saranathan, R. and Sudhakar, P. and Sawant, A.R. and Tomar, A. and Madhangi, M. and Sah, S. and Annapurna, S. and Arunkumar, K.P. and Prashanth, K. (2017) Disruption of tetR type regulator adeN by mobile genetic element confers elevated virulence in Acinetobacter baumannii. Virulence, 8 (7). pp. 1316-1334. ISSN 2150-5594

Takada, H. and Shimada, T. and Dey, Debashish and Quyyum, M.Z. and Nakano, M. and Ishiguro, A. and Yoshida, H. and Yamamoto, K. and Sen, Ranjan and Ishihama, A. (2016) Differential Regulation of rRNA and tRNA Transcription from the rRNA-tRNA Composite Operon in Escherichia coli. PLoS One, 11 (12). e163057. ISSN 1932-6203

Uttarilli, Anusha and Ranganath, P. and Matta, D. and Jain, J.M.N. and Krishnaprasad, C. and Sobhan Babu, A. and Girisha, K.M. and Verma, I.C. and Phadke, S.R. and Mandal, K. and Puri, R.D. and Aggarwal, Shagun and Danda, S. and Sankar, V.H. and Kapoor, S. and Bhat, M. and Gowrishankar, K. and Hasan, A.Q. and Nair, M. and Nampoothiri, S. and Dalal, Ashwin (2016) Identification and Characterization of 20 Novel Pathogenic Variants in 60 unrelated Indian patients with Mucopolysaccharidoses (MPS) type I and type II. Clinical Genetics, 90 (6). pp. 496-508. ISSN 0009-9163

Joshi, Kiranmai and Shah, V.J. and Subba Reddy, Maddika (2016) GINS complex protein Sld5 recruits SIK1 to activate MCM helicase during DNA replication. Cellular Signalling, 28 (12). pp. 1852-1862. ISSN 0898-6568

Pathania, A. and Gupta, A.K. and Dubey, Swati and Gopal, B. and Sardesai, A.A. (2016) The topology of the L-arginine exporter ArgO conforms to an Nin-Coutconfiguration inEscherichia coli: Requirement for the cytoplasmic N-terminal domain, functional helical interactions and an aspartate pair for ArgO function. Journal of Bacteriology, 198 (23). pp. 3186-3199. ISSN 0021-9193

Naushad, S.M. and Sai Shruti, P. and Bharathi, V. and Krishnaprasad, C. and Hussain, T. and Alrokayan, S.A. and Naik, U. and Radha Rama Devi, A. (2016) Clinical utility of folate pathway genetic polymorphisms in the diagnosis of autism spectrum disorders. Psychiatric Genetics, 26 (6). pp. 281-286. ISSN 0955-8829

Aparna, Y. and Surekha, C. and Satyavathi, V.V. and Anitha, M. (2016) Spermidine alleviates oxidative stress in silk glands of Bombyx mori. Journal of Asia-Pacific Entomology, 19 (4). pp. 1197-1202. ISSN 1226-8615

Srivastava, Priyanka and Tuteja, M. and Dalal, Ashwin and Mandal, K. and Phadke, S.R. (2016) Novel mutations in the transmembrane natriuretic peptide receptor NPR-B gene in four Indian families with acromesomelic dysplasia, type Maroteaux. Journal of Genetics, 95 (4). pp. 905-909. ISSN 0022-1333

Pandey, S.S. and Patnana, P.K. and Lomada, S.K. and Tomar, A. and Chatterjee, Subhadeep (2016) Co-regulation of Iron Metabolism and Virulence Associated Functions by Iron and XibR, a Novel Iron Binding Transcription Factor, in the Plant Pathogen Xanthomonas. PLOS Pathogens, 12 (11). e1006019. ISSN 1553-7374

Sharma, V. and Purushotham, R. and Kaur, Rupinder (2016) The Phosphoinositide 3-Kinase Regulates Retrograde Trafficking of the Iron Permease CgFtr1 and Iron Homeostasis in Candida glabrata. Journal of Biological Chemistry, 291 (47). pp. 24715-24734. ISSN 0021-9258

Das Bhowmik, A. and Dalal, Ashwin and Matta, D. and Rukmini, M.K. and Kanikannan, M.A. and Aggarwal, Shagun (2016) Identification of a novel splice site HSPG2 mutation and prenatal diagnosis in Schwartz Jampel Syndrome type 1 using whole exome sequencing. Neuromuscular Disorders, 26 (11). pp. 809-814. ISSN 0960-8966

Ramasarma, T. (2016) Dioxygen reduction, reduced oxygen species, oxygen toxicity and antioxidants — A commentary. Indian Journal of Experimental Biology, 54 (11). pp. 688-699. ISSN 0019-5189

Vishalini, V. and Agrawal, Sonia and Sen, Ranjan (2016) Molecular Basis of NusG-mediated Regulation of Rho-dependent Transcription Termination in Bacteria. Journal of Biological Chemistry, 291 (43). pp. 22386-22403. ISSN 0021-9258

Ranganath, P. and Matta, D. and Bhavani, G.S. and Wangnekar, S. and Jain, J.M.N. and Verma, I.C. and Kabra, M. and Puri, R.D. and Danda, S. and Gupta, N. and Girisha, K.M. and Sankar, V.H. and Patil, S.J. and Radha Rama Devi, A. and Bhat, M. and Gowrishankar, K. and Mandal, K. and Aggarwal, Shagun and Tamhankar, P.M. and Tilak, P. and Phadke, S.R. and Dalal, Ashwin (2016) Spectrum of SMPD1mutations in Asian-Indian patients with acid sphingomyelinase (ASM)-deficient Niemann-Pick disease. American Journal of Medical Genetics Part A, 170 (10). pp. 2719-2730. ISSN 1552-4825

Chaudhary, A.K. and Sankar, V.H. and Bashyam, M.D. (2016) A novel large deletion that encompasses EDA and the downstream gene AWAT2 causes X-linked hypohidrotic/anhidrotic ectodermal dysplasia. Journal of Dermatological Science, 84 (1). pp. 105-107. ISSN 0923-1811

Manasa, C. and Rai, Ashim and Malla, A.B. and Wu, M. and Fiedler, D. and Mallik, R. and Bhandari, Rashna (2016) Inositol hexakisphosphate kinase 1 (IP6K1) activity is required for cytoplasmic dynein-driven transport. Biochemical Journal, 473 (19). pp. 3031-3047. ISSN 0264-6021

Dutta, Usha (2016) The history of Human cytogenetics in India- A review. Gene, 589 (2). pp. 112-117. ISSN 0378-1119

Chakraborty, S. and Arunkumar, K.P. (2016) Annual Review of Genetics, 2015, Bonnie L. Bassler, Michael Lichten and Gerturd Schüpbach (eds). Current Science, 111 (5). pp. 933-935. ISSN 0011-3891

Rahul, G. and Sangeetha, V. and Kumar, Kundan and Thakur, S.S. and Mishra, Krishnaveni and Kaur, Rupinder (2016) Identification of components of the SUMOylation machinery in Candida glabrata: role of the deSUMOylation peptidase CgUlp2 in virulence. Journal of Biological Chemistry, 291 (37). pp. 19573-19589. ISSN 0021-9258

Udgata, Atul and Qureshi, R. and Mukhopadhyay, Sangita (2016) Transduction of Functionally Contrasting Signals by Two Mycobacterial PPE Proteins Downstream of TLR2 Receptors. The Journal of Immunology, 197 (5). pp. 1776-1787. ISSN 0022-1767

Paliwal, S. and Bhaskar, Seema and Nageshwar Reddy, D. and Venkat Rao, G. and Thomas, Varghese and Singh, S.P. and Chandak, G.R. (2016) Association Analysis of PRSS1-PRSS2 and CLDN2-MORC4 Variants in Nonalcoholic Chronic Pancreatitis Using Tropical Calcific Pancreatitis as Model. Pancreas, 45 (8). pp. 1153-1157. ISSN 0885-3177

Patil, D.V. and Phadke, M.S. and Pahwa, J.S. and Dalal, Ashwin (2016) Brothers with constrictive pericarditis – A novel mutation in a rare disease. Indian Heart Journal, 68 (S2). S284-S287. ISSN 0019-4832

Hebbar, Malavika and Harsha Prasada, L. and Das Bhowmik, A. and Trujillano, D. and Shukla, A. and Chakraborti, Shrijeet and Kandaswamy, K.K. and Rolfs, A. and Kamath, N. and Dalal, Ashwin and Bielas, S. and Girisha, K.M. (2016) Homozygous deletion of exons 2 and 3 of NPC2 associated with Niemann-Pick disease type C. American Journal of Medical Genetics Part A, 170 (9). pp. 2486-2489. ISSN 1552-4825

Kiran, M. and Nagarajaram, H.A. (2016) Interaction and localization diversities of global and local hubs in human protein–protein interaction networks. Molecular BioSystems, 12 (9). pp. 2875-2882. ISSN 1742-206X

Chatterjee, Nirupama and Anwar, T. and Islam, N. and Ramasarma, T. and Ramakrishna, Gayatri (2016) Growth arrest of lung carcinoma cells (A549) by polyacrylate-anchored peroxovanadate by activating Rac1-NADPH oxidase signalling axis. Molecular and Cellular Biochemistry, 420 (1). pp. 9-20. ISSN 0300-8177

Girisha, K.M. and Kortüm, F. and Shah, H. and Alawi, M. and Dalal, Ashwin and Bhavani, G.S. and Kutsche, K. (2016) A novel multiple joint dislocation syndrome associated with a homozygous nonsense variant in the EXOC6B gene. European Journal of Human Genetics, 24 (8). pp. 1206-1210. ISSN 1018-4813

Jadav, R.S. and Kumar, D. and Buwa, N. and Ganguli, S. and Thampatty, S.R. and Balasubramanian, N. and Bhandari, Rashna (2016) Deletion of inositol hexakisphosphate kinase 1 (IP6K1) reduces cell migration and invasion, conferring protection from aerodigestive tract carcinoma in mice. Cellular Signalling, 28 (8). pp. 1124-1136. ISSN 0898-6568

Gopinath, G. and Arunkumar, K.P. and Mita, K. and Nagaraju, J. (2016) Role of Bmznf-2, a Bombyx mori CCCH zinc finger gene, in masculinisation and differential splicing of Bmtra-2. Insect Biochemistry and Molecular Biology, 75. pp. 32-44. ISSN 0965-1748

Roy, Ajit and Reddi, R.K. and Sawhney, Bhavik and Ghosh, D.K. and Anthony, A. and Ranjan, Akash (2016) Expression, Functional Characterization and X-ray Analysis of HosA, A Member of MarR Family of Transcription Regulator from Uropathogenic Escherichia coli. The Protein Journal, 35 (4). pp. 269-282. ISSN 1572-3887

Mokhamatam, R.B. and Sahoo, B.K. and Manna, S.K. (2016) Suppression of microphthalmia-associated transcription factor, but not NF-kappa B sensitizes melanoma specific cell death. Apoptosis, 21 (8). pp. 928-940. ISSN 1360-8185

Giri, D.A. and Rekha, S. and Kasbekar, D.P. (2016) Crosses Heterozygous for Hybrid Neurospora Translocation Strains Show Transmission Ratio Distortion Disfavoring Homokaryotic Ascospores Made Following Alternate Segregation. G3: Genes Genomes Genetics, 6 (8). pp. 2593-2600. ISSN 2160-1836

Raychaudhuri, K. and Chaudhary, Neelam and Gurjar, M. and D'Souza, R. and Limzerwala, J. and Subba Reddy, Maddika and Dalal, S.N. (2016) 14-3-3σ Gene Loss Leads to Activation of the Epithelial to Mesenchymal Transition Due to the Stabilization of c-Jun Protein. Journal of Biological Chemistry, 291 (31). pp. 16068-16081. ISSN 0021-9258

Aggarwal, Shagun and Das Bhowmik, A. and Ramprasad, V.L. and Murugan, S. and Dalal, Ashwin (2016) A splice site mutation inHERC1leads to syndromic intellectual disability with macrocephaly and facial dysmorphism: Further delineation of the phenotypic spectrum. American Journal of Medical Genetics Part A, 170 (7). pp. 1868-1873. ISSN 1552-4825

Sharma, Ravish and Shimada, T. and Mishra, V.K. and Upreti, Suchitra and Sardesai, A.A. (2016) Growth inhibition by external potassium ofEscherichia colilacking PtsN (EIIANtr) is caused by potassium limitation mediated by YcgO. Journal of Bacteriology, 198 (13). pp. 1868-1882. ISSN 0021-9193

Anwar, T. and Khosla, Sanjeev and Ramakrishna, Gayatri (2016) Increased expression of SIRT2 is a novel marker of cellular senescence and is dependent on wild type p53 status. Cell Cycle, 15 (14). pp. 1883-1897. ISSN 1538-4101

Haq, I. and Nazir, Aanisa (2016) Which statistical hypothesis test should I apply? A simple guide for beginners. International Journal of Preventive Medicine, 7 (1). pp. 81-83. ISSN 2008-7802

Abraham, P.R. and Udgata, Atul and Latha, G.S. and Mukhopadhyay, Sangita (2016) The Mycobacterium tuberculosis PPE protein Rv1168c induces stronger B cell response than Rv0256c in active TB patients. Infection, Genetics and Evolution, 40. pp. 339-345. ISSN 1567-1348

Chaudhary, A.K. and Girisha, K.M. and Bashyam, M.D. (2016) A novel EDARADD5′-splice site mutation resulting in activation of two alternate cryptic 5′-splice sites causes autosomal recessive Hypohidrotic Ectodermal Dysplasia. American Journal of Medical Genetics Part A, 170 (6). pp. 1639-1641. ISSN 1552-4825

Phadke, S.R. and Kar, A. and Das Bhowmik, A. and Dalal, Ashwin (2016) Complex Camptosynpolydactyly and Mesoaxial synostotic syndactyly with phalangeal reduction are allelic disorders. American Journal of Medical Genetics Part A, 170 (6). pp. 1622-1625. ISSN 1552-4825

Sawanth, S.K. and Gopinath, G. and Sambrani, N. and Arunkumar, K.P. (2016) The autoregulatory loop: A common mechanism of regulation of key sex determining genes in insects. Journal of Biosciences, 41 (2). pp. 283-294. ISSN 0250-5991

Nazir, Aanisa and Harinarayanan, R. (2016) (p)ppGpp and the bacterial cell cycle. Journal of Biosciences, 41 (2). pp. 277-282. ISSN 0250-5991

Kasbekar, D.P. (2016) RNA-Seq, and ye shall find: Sexual-stage-specific A-to-I RNA editing in fungi. Journal of Biosciences, 41 (2). pp. 171-172. ISSN 0250-5991

Khandelwal, N.K. and Kaemmer, P. and Forster, T.M. and Singh, A. and Coste, A.T. and Andes, D.R. and Hube, B. and Sanglard, D. and Chauhan, N. and Kaur, Rupinder and d'Enfert, C. and Mondal, A.K. and Prasad, R. (2016) Pleiotropic effects of the vacuolar ABC transporter MLT1 of Candida albicans on cell function and virulence. Biochemical Journal, 473 (11). pp. 1537-1552. ISSN 0264-6021

Sharma, Garima and Sowpati, D.T. and Singh, Prakruti and Khan, M.Z. and Ganji, Rakesh and Upadhyay, Sandeep and Banerjee, Sharmistha and Nandicoori, V.K. and Khosla, Sanjeev (2016) Genome-wide non-CpG methylation of the host genome during M. tuberculosis infection. Scientific Reports, 6. p. 25006. ISSN 2045-2322

Das Bhowmik, A. and Dalal, Ashwin and Matta, D. and Sundaram, C. and Aggarwal, Shagun (2016) Targeted Next Generation Sequencing Identifies a Novel Deletion in LAMA2 Gene in a Merosin Deficient Congenital Muscular Dystrophy Patient. Indian Journal of Pediatrics, 83 (4). pp. 354-355. ISSN 0019-5456

Qayyum, M.Z. and Dey, Debashish and Sen, Ranjan (2016) Transcription Elongation Factor NusA Is a General Antagonist of Rho-dependent Termination inEscherichia coli. Journal of Biological Chemistry, 291 (15). pp. 8090-8108. ISSN 0021-9258

Vimala, A. and Harinarayanan, R. (2016) Transketolase activity modulates glycerol-3-phosphate levels in Escherichia coli. Molecular Microbiology, 100 (2). pp. 263-277. ISSN 0950-382X

Zaidi, A.H. and Raviprakash, N. and Mokhamatam, R.B. and Gupta, Pankaj and Manna, S.K. (2016) Profilin potentiates chemotherapeutic agents mediated cell death via suppression of NF-κB and upregulation of p53. Apoptosis, 21 (4). pp. 502-513. ISSN 1360-8185

Ahmad, M. and Nongmaithem, S.S. and Krishnaveni, G.V. and Fall, C.H.D. and Yajnik, C.S. and Chandak, G.R. (2016) Lack of replication of association of THSD7A with obesity. International Journal of Obesity, 40 (4). pp. 725-726. ISSN 0307-0565

Dalal, Ashwin (2016) Dental stem cells: Hope or hype? Indian Journal of Dental Research, 27 (2). pp. 113-114. ISSN 1998-3603

Zaidi, A.H. and Manna, S.K. (2016) Profilin-PTEN interaction suppresses NF-kappa B activation via inhibition of IKK phosphorylation. Biochemical Journal, 473 (7). pp. 859-872. ISSN 0264-6021

Sharma, Aditi and Rustad, T. and Mahajan, G. and Arun Kumar, and Rao, K.V.S. and Banerjee, S. and Sherman, D.R. and Mande, S.C. (2016) Towards understanding the biological function of the unusual chaperonin Cpn60.1 (GroEL1) of Mycobacterium tuberculosis. Tuberculosis, 97. pp. 137-146. ISSN 1472-9792

Shantibala, T. and Victor, Th. and Luikham, R. and Arunkumar, K.P. and Debaraj Sharma, H. and Lokeshwari, R.K. and Kim, I. (2016) Complete mitochondrial genome of the wild eri silkworm,Samia canningi(Lepidoptera: Saturniidae). Mitochondrial DNA, 27 (2). pp. 844-845. ISSN 1940-1736

Kasbekar, D.P. (2016) Long-drawn-out story. Journal of Biosciences, 41 (1). p. 1. ISSN 0250-5991

Roy, Ajit and Ranjan, Akash (2016) HosA, a MarR Family Transcriptional Regulator, Represses Nonoxidative Hydroxyarylic Acid Decarboxylase Operon and Is Modulated by 4-Hydroxybenzoic Acid. Biochemistry, 55 (7). pp. 1120-1134. ISSN 0006-2960

Singh, Parul and Rao, R.N. and Reddy, J.R.C. and Prasad, R.B.N. and Kumar, K.S. and Ghosh, S. and Mukhopadhyay, Sangita (2016) PE11, a PE/PPE family protein of Mycobacterium tuberculosis is involved in cell wall remodeling and virulence. Scientific Reports, 6. p. 21624. ISSN 2045-2322

Shinde, S.R. and Subba Reddy, Maddika (2016) PTEN modulates EGFR late endocytic trafficking and degradation by dephosphorylating Rab7. Nature Communications, 7. p. 10689. ISSN 2041-1723

Nazir, Aanisa and Harinarayanan, R. (2016) Inactivation of cell division protein FtsZ by SulA makes Lon indispensable for the viability of ppGpp0 strain of Escherichia coli. Journal of Bacteriology, 198 (4). pp. 688-700. ISSN 0021-9193

Satyavathi, V.V. and Deepa, N. and Nagaraju, J. (2016) Noduler an immune protein augments infection-induced cell proliferation through cross-talking with p38 MAPK. Immunobiology, 221 (2). pp. 387-397. ISSN 0171-2985

Chilukoti, N. and Kumar, C.M.S. and Mande, S.C. (2016) GroEL2 OF M. tuberculosis reveals the importance of structural pliability in chaperonin function. Journal of Bacteriology, 198 (3). pp. 486-497. ISSN 0021-9193

Bhavani, G.S. and Shah, H. and Shukla, A. and Gupta, N. and Gowrishankar, K. and Rao, A.P. and Kabra, M. and Agarwal, M. and Ranganath, P. and Ekbote, A.V. and Phadke, S.R. and Kamath, A. and Dalal, Ashwin and Girisha, K.M. (2016) Clinical and mutation profile of multicentric osteolysis nodulosis and arthropathy. American Journal of Medical Genetics Part A, 170 (2). pp. 410-417. ISSN 1552-4825

Ramasarma, T. and Rafi, M.M. (2016) A glucose-centric perspective of hyperglycemia. Indian Journal of Experimental Biology, 54 (2). pp. 83-99. ISSN 0019-5189

Khosla, Sanjeev and Sharma, Garima and Yaseen, Imtiyaz (2016) Learning epigenetic regulation from mycobacteria. Microbial Cell, 3 (2). pp. 92-94. ISSN 2311-2638

Basu, A. and Tomar, A. and Vasanthi, D. and Mishra, R.K. and Khosla, Sanjeev (2016) DNMT3L enables accumulation and inheritance of epimutations in transgenic Drosophila. Scientific Reports, 6. p. 19572. ISSN 2045-2322

Verma, N. and Manna, S.K. (2016) Advanced Glycation End Products (AGE) Potently Induce Autophagy through Activation of RAF Protein Kinase and Nuclear Factor κB (NF-κB). Journal of Biological Chemistry, 291 (3). pp. 1481-1491. ISSN 0021-9258

Aggarwal, Shagun and Bahal, Ashish and Dalal, Ashwin (2016) Renal dysfunction in sibs with band like calcification with simplified gyration and polymicrogyria: Report of a new mutation and review of literature. European Journal of Medical Genetics, 59 (1). pp. 5-10. ISSN 1769-7212

Radha Rama Devi, A. and Ramesh, V.A. and Nagarajaram, H.A. and Satish, S.P.S. and Jayanthi, U. and Lingappa, L. (2016) Spectrum of mutations in Glutaryl-CoA dehydrogenase gene in glutaric aciduria type I – Study from South India. Brain and Development, 38 (1). pp. 54-60. ISSN 0387-7604

Deshpande, R. and Parthasarathy, L. and Dalal, Ashwin and Khadilkar, V. and Khadilkar, A. (2016) Variability in the Manifestations and Evolution of Symptoms in a Patient with H Syndrome. The Indian Journal of Pediatrics, 83 (1). pp. 92-93. ISSN 0019-5456

Satyavathi, V.V. and Manga, V. and Subba Rao, M.V. and Chittibabu, M. (2016) Genetic analysis of reciprocal differences in the inheritance of in vitro characters in pearl millet. Genetics and Molecular Biology, 39 (1). pp. 54-61. ISSN 1415-4757

Lakkireddy, Maheshwar and Aggarwal, Shagun and Vijaykrishna, C. and Vasundhara, S.C. and Madhulatha, K. (2016) Identical Twins with Infantile Systemic Hyalinosis: Case study and review of literature. Journal of Orthopaedic Case Reports, 6 (1). pp. 69-71. ISSN 2250-0685

Shinde, S.R. and Subba Reddy, Maddika (2016) A modification switch on a molecular switch: phosphoregulation of Rab7 during endosome maturation. Small GTPases, 7 (3). pp. 164-167. ISSN 2154-1248

Gupta, N. and Benjamin, M. and Kar, A. and Munjal, S.D. and Sarangi, A.N. and Dalal, Ashwin and Aggarwal, Rakesh (2015) Identification of Promotor and Exonic Variations, and Functional Characterization of a Splice Site Mutation in Indian Patients with Unconjugated Hyperbilirubinemia. PLoS ONE, 10 (12). e0145967. ISSN 1932-6203

Bashyam, M.D. and Kotapalli, V. and Raman, R. and Chaudhary, A.K. and Yadav, B.K. and Gowrishankar, S. and Uppin, S.G. and Kongara, R. and Sastry, R.A. and Mohana Vamsy, C. and Patnaik, S. and Rao, S. and Dsouza, S. and Desai, D.C. and Tester, A. (2015) Evidence for presence of mismatch repair gene expression positive Lynch syndrome cases in India. Molecular Carcinogenesis, 54 (12). pp. 1807-1814. ISSN 0899-1987

Vivek Reddy, P. and Subba Reddy, Maddika (2015) HACE1 mediated K27 ubiquitin linkage leads to YB-1 protein secretion. Cellular Signalling, 27 (12). pp. 2355-2362. ISSN 0898-6568

Reddy, E.R. and Swapna, Y. and Raghavendra, M. and Lahiri, K. and Neeraja, A.P. and Haldar, Devyani and Parsa, K.V. L. and Kulkarni, P. and Rajadurai, M. (2015) Red Fluorescent Organic Nanoparticle Bioprobes: A Photostable Cytoplasmic Stain for Long Term In Vitro and In Vivo Visualization. ChemNanoMat, 1 (8). pp. 567-576. ISSN 2199-692X

Yaseen, Imtiyaz and Kaur, Prabhjot and Vinay Kumar, N. and Khosla, Sanjeev (2015) Mycobacteria modulate host epigenetic machinery by Rv1988 methylation of a non-tail arginine of histone H3. Nature Communications, 6. p. 8922. ISSN 2041-1723

Das Bhowmik, A. and Dalal, Ashwin (2015) Whole exome sequencing identifies a novel frameshift mutation in GPC3 gene in a patient with overgrowth syndrome. Gene, 572 (2). pp. 303-306. ISSN 0378-1119

Chen, Z. and Nohata, J. and Guo, H. and Li, S. and Liu, J. and Guo, Y. and Yamamoto, K. and Kadono-Okuda, K. and Liu, C. and Arunkumar, K.P. and Nagaraju, J. and Zhang, Y. and Liu, S. and Labropoulou, V. and Swevers, L. and Tsitoura, P. and Iatrou, K. and Gopinathan, K.P. and Goldsmith, M.R. and Xia, Q. and Mita, K. (2015) Construction, complete sequence, and annotation of a BAC contig covering the silkworm chorion locus. Scientific Data, 2. p. 150062. ISSN 2052-4463

Chen, Z. and Nohata, J. and Guo, H. and Li, S. and Liu, J. and Guo, Y. and Yamamoto, K. and Kadono-Okuda, K. and Liu, C. and Arunkumar, K.P. and Nagaraju, J. and Zhang, Y. and Liu, S. and Labropoulou, V. and Swevers, L. and Tsitoura, P. and Iatrou, K. and Gopinathan, K.P. and Goldsmith, M.R. and Xia, Q. and Mita, K. (2015) A comprehensive analysis of the chorion locus in silkmoth. Scientific Reports, 5. p. 16424. ISSN 2045-2322

Sawhney, B. and Chopra, K. and Mishra, R. and Ranjan, Akash (2015) Identification of Plasmodium falciparum apicoplast-targeted tRNA-guanine transglycosylase and its potential inhibitors using comparative genomics, molecular modelling, docking and simulation studies. Journal of Biomolecular Structure and Dynamics, 33 (11). pp. 2404-2420. ISSN 0739-1102

Aggarwal, Shagun and Jain, S.J.M.N. and Das Bhowmik, A. and Tandon, A. and Dalal, Ashwin (2015) Molecular studies on parents after autopsy identify recombinant GBA gene in a case of Gaucher disease with ichthyosis phenotype. American Journal of Medical Genetics Part A, 167 (11). pp. 2858-2860. ISSN 1552-4825

Kakkar, A. and Narasimha Rao, N. and Anil, K. and Pradhan, B.B. and Chatterjee, Subhadeep (2015) Xanthomonas campestriscell–cell signalling molecule DSF (diffusible signal factor) elicits innate immunity in plants and is suppressed by the exopolysaccharide xanthan. Journal of Experimental Botany, 66 (21). pp. 6697-6714. ISSN 0022-0957

Rasheedi, S. and Suragani, M. and Raviprasad, P. and Ghosh, S. and Suragani, R.N.V.S. and Ramaiah, K.V.A. and Ehtesham, N.Z. (2015) Functional characterization of PeIF5B as eIF5B homologue from Pisum sativum. Biochimie, 118. pp. 36-43. ISSN 0300-9084

Kumar, Raviranjan and Chotaliya, M. and Sruthakeerthi, V. and Auradkar, A. and Kalyani, P. and Joshi, Rohit (2015) Role of Homothorax in region specific regulation of Deformed in embryonic neuroblasts. Mechanisms of Development, 138 (2). pp. 190-197. ISSN 0925-4773

Chakraborty, S. and Muthulakshmi, M. and Vardhini, D. and Jayaprakash, P. and Nagaraju, J. and Arunkumar, K.P. (2015) Genetic analysis of Indian tasar silkmoth (Antheraea mylitta) populations. Scientific Reports, 5. p. 15728. ISSN 2045-2322

Ranganath, P. (2015) MicroRNA-155 and its role in malignant hematopoiesis. Biomarker Insights, 10. pp. 95-102. ISSN 1177-2719

Bhavani, G.S. and Shah, H. and Dalal, Ashwin and Shukla, A. and Danda, S. and Aggarwal, Shagun and Phadke, S.R. and Gupta, N. and Kabra, M. and Gowrishankar, K. and Gupta, A. and Bhat, M. and Puri, R.D. and Bijarnia-Mahay, S. and Nampoothiri, S. and Mohanasundaram, K.M. and Rajeswari, S. and Kulkarni, A.M. and Kulkarni, M.L. and Ranganath, P. and Radha Rama Devi, A. and Hariharan, S.V. and Girisha, K.M. (2015) Novel and recurrent mutations inWISP3and an atypical phenotype. American Journal of Medical Genetics Part A, 167 (10). pp. 2481-2484. ISSN 1552-4825

Sahoo, B.K. and Zaidi, A.H. and Gupta, Pankaj and Mokhamatam, R.B. and Raviprakash, N. and Mahali, S.K. and Manna, S.K. (2015) A natural xanthone increases catalase activity but decreases NF-kappa B and lipid peroxidation in U-937 and HepG2 cell lines. European Journal of Pharmacology, 764. pp. 520-528. ISSN 0014-2999

Uttarilli, Anusha and Ranganath, P. and Jain, S.J.M.N. and Krishnaprasad, C. and Sinha, A. and Verma, I.C. and Phadke, S.R. and Puri, R.D. and Danda, S. and Muranjan, M. and Jevalikar, G. and Nagarajaram, H.A. and Dalal, Ashwin (2015) Novel mutations of the arylsulphatase B (ARSB) gene in Indian patients with mucopolysaccharidosis type VI. Indian Journal of Medical Research, 142 (4). pp. 414-425. ISSN 0971-5916

Kapoor, R. and Arora, S. and Ponia, S.S. and Kumar, B. and Subba Reddy, Maddika and Banerjea, A.C. (2015) The miRNA miR-34a enhances HIV-1 replication by targeting PNUTS/PPP1R10, which negatively regulates HIV-1 transcriptional complex formation. Biochemical Journal, 470 (3). pp. 293-302. ISSN 1470-8728

Swarna Gowri, Thota and Bhandari, Rashna (2015) The emerging roles of inositol pyrophosphates in eukaryotic cell physiology. Journal of Biosciences, 40 (3). pp. 593-605. ISSN 0250-5991

Vemireddy, L.R. and Noor, S. and Satyavathi, V.V. and Srividhya, A. and Kaliappan, A. and Parimala, S.R.N. and Bharathi, P.M. and Deborah, D.A. and Sudhakar Rao, K.V. and Shobharani, N. and Siddiq, E.A. and Nagaraju, J. (2015) Discovery and mapping of genomic regions governing economically important traits of Basmati rice. BMC Plant Biology, 15 (1). p. 207. ISSN 1471-2229

Bidchol, A.M. and Dalal, Ashwin and Trivedi, R. and Shukla, A. and Nampoothiri, S. and Sankar, V.H. and Danda, S. and Gupta, N. and Kabra, M. and Hebbar, S.A. and Bhat, R.Y. and Matta, D. and Ekbote, A.V. and Puri, R.D. and Phadke, S.R. and Gowrishankar, K. and Aggarwal, Shagun and Ranganath, P. and Sharda, S. and Kamate, M. and Datar, C.A. and Bhat, K. and Kamath, N. and Shah, H. and Krishna, S. and Gopinath, P.M. and Verma, I.C. and Nagarajaram, H.A. and Satyamoorthy, K. and Girisha, K.M. (2015) Recurrent and novel GLB1 mutations in India. Gene, 567 (2). pp. 173-181. ISSN 0378-1119

Gadipally, S.R. and Sarkar, A. and Nandineni, M.R. (2015) Selective enrichment of STRs for applications in forensic human identification. Electrophoresis, 36 (15). pp. 1768-1774. ISSN 0173-0835

Gupta, K.A. and Mita, K. and Arunkumar, K.P. and Nagaraju, J. (2015) Molecular architecture of silk fibroin of Indian golden silkmoth, Antheraea assama. Scientific Reports, 5. p. 12706. ISSN 2045-2322

Singh, S. and Kumar, P.U. and Thakur, S. and Shashi Kiran, and Sen, B. and Sharma, S. and Rao, V.V. and Poongothai , A.R. and Ramakrishna, Gayatri (2015) Expression/localization patterns of sirtuins (SIRT1, SIRT2, and SIRT7) during progression of cervical cancer and effects of sirtuin inhibitors on growth of cervical cancer cells. Tumor Biology, 36 (8). pp. 6159-6171. ISSN 1010-4283

Dalal, Ashwin and Das Bhowmik, A. and Agarwal, Divya and Phadke, S.R. (2015) Exome sequencing & homozygosity mapping for identification of genetic aetiology for spastic ataxia in a consanguineous family. Indian Journal of Medical Research, 142 (2). pp. 220-224. ISSN 0971-5916

Maheshwar, L. and Vijaykrishna, C. and Ranganath, P. and Arora, A.J. and Vanaja, M.C. (2015) Clinical and Genetic Analysis of Fibrodysplasia Ossificans Progressiva: A Case Report and Literature Review. Journal of Clinical and Diagnostic Research, 9 (8). RD01-RD03. ISSN 2249-782X

Mishra, S. and Sen, Ranjan (2015) N protein from lambdoid phages transforms NusA into an antiterminator by modulating NusA-RNA polymerase flap domain interactions. Nucleic Acids Research, 43 (12). pp. 5744-5758. ISSN 0305-1048

Ahmed, A. and Das, A. and Mukhopadhyay, Sangita (2015) Immunoregulatory functions and expression patterns of PE/PPE family members: Roles in pathogenicity and impact on anti-tuberculosis vaccine and drug design. IUBMB Life, 67 (6). pp. 414-427. ISSN 1521-6543

Srivastava, V.K. and Suneetha, K.J. and Kaur, Rupinder (2015) The mitogen-activated protein kinase CgHog1 is required for iron homeostasis, adherence and virulence in Candida glabrata. The FEBS Journal, 282 (11). pp. 2142-2166. ISSN 1742-4658

Pathania, A. and Sardesai, A.A. (2015) Distinct paths for basic amino acid export in Escherichia coli: YbjE (LysO) mediates export of L-lysine. Journal of Bacteriology, 197 (12). pp. 2036-2047. ISSN 0021-9193

Vemireddy, L.R. and Satyavathi, V.V. and Siddiq, E.A. and Nagaraju, J. (2015) Review of methods for the detection and quantification of adulteration of rice: Basmati as a case study. Journal of Food Science and Technology, 52 (6). pp. 3187-3202. ISSN 0022-1155

Giri, D.A. and Rekha, S. and Kasbekar, D.P. (2015) Neurospora Heterokaryons with Complementary Duplications and Deficiencies in Their Constituent Nuclei Provide an Approach to Identify Nucleus-Limited Genes. G3 Genes Genomes Genetics, 5 (6). pp. 1263-1272. ISSN 2160-1836

Gupta, A. and Uttarilli, Anusha and Dalal, Ashwin and Girisha, K.M. (2015) Hunter syndrome with late age of presentation: clinical description of a case and review of the literature. BMJ Case Reports, 2015. ISSN 1757-790X

Rai, Rikky and Javvadi, S. and Chatterjee, Subhadeep (2015) Cell-cell signalling promotes ferric iron uptake in Xanthomonas oryzae pv. oryzicola that contribute to its virulence and growth inside rice. Molecular Microbiology, 96 (4). pp. 708-727. ISSN 1365-2958

Bhat, K.H. and Mukhopadhyay, Sangita (2015) Macrophage takeover and the host–bacilli interplay during tuberculosis. Future Microbiology, 10 (5). pp. 853-872. ISSN 1746-0913

Aggarwal, Shagun and Phadke, S.R. (2015) Medical genetics and genomic medicine in India: current status and opportunities ahead. Molecular Genetics & Genomic Medicine, 3 (3). pp. 160-171. ISSN 2324-9269

Sharma, G. and Upadhyay, S. and Srilalitha, M. and Nandicoori, V.K. and Khosla, Sanjeev (2015) The interaction of mycobacterial protein Rv2966c with host chromatin is mediated through non-CpG methylation and histone H3/H4 binding. Nucleic Acids Research, 43 (8). pp. 3922-37. ISSN 1362-4962

Pasha, J. and Bhaskar, K. and Sen, S. and Seerapu, G.P.K. and Bujji, S. and Haldar, Devyani and Srinivas, N. and Srinivas, O. (2015) Amberlyst-15 catalyzed Povarov reaction of N-arylidene-1H-indazol-6-amines and indoles: a greener approach to the synthesis of exo-1,6,7,7a,12,12a-hexahydroindolo[3,2-c]pyrazolo[3,4-f]quinolines as potential sirtuin inhibitors. Tetrahedron Letters, 56 (18). pp. 2289-2292. ISSN 0040-4039

Rachita, H.R. and Nagarajaram, H.A. (2015) Molecular principles of human virus protein-protein interactions. Bioinformatics (Oxford, England), 31 (7). pp. 1025-33. ISSN 1367-4811

Yousuf, S. and Rajendra, A, and Vindal, V. and Ranjan, Akash (2015) Rv0494 is a starvation-inducible, auto-regulatory FadR-like regulator from Mycobacterium tuberculosis. Microbiology, 161 (3). pp. 463-476. ISSN 1350-0872

Shashi Kiran, and Anwar, T. and Kiran, Manjari and Ramakrishna, Gayatri (2015) Sirtuin 7 in cell proliferation, stress and disease: Rise of the Seventh Sirtuin! Cellular signalling, 27 (3). pp. 673-82. ISSN 1873-3913

Das Bhowmik, A. and Rangaswamaiah, S. and Srinivas, G. and Dalal, Ashwin (2015) Molecular genetic analysis of trinucleotide repeat disorders (TRDs) in Indian population and application of repeat primed PCR. European journal of Medical Genetics, 58 (3). pp. 160-167. ISSN 1878-0849

Dutta, Usha and Hansmann, I. and Schlote, D. (2015) Molecular cytogenetic characterization of a familial pericentric inversion 3 associated with short stature. European Journal of Medical Genetics, 58 (3). pp. 154-159. ISSN 1878-0849

Delma, C.R. and Somasundaram, S.T. and Srinivasan, G.P. and Khursheed, M. and Bashyam, M.D. and Aravindan, N. (2015) Fucoidan from Turbinaria conoides: a multifaceted 'deliverable' to combat pancreatic cancer progression. International Journal of Biological Macromolecules, 74. pp. 447-57. ISSN 1879-0003

Parine, N.R. and Lakshmi, P. and Kumar, D. and Shaik, J.P. and Alanazi, M. and Pathan, A.A.K. (2015) Development and characterisation of nine polymorphic microsatellite markers for Tephrosia calophylla Bedd. (Fabaceae). Saudi Journal of Biological Sciences, 22 (2). pp. 164-167. ISSN 1319-562X

Kasbekar, D.P. (2015) Via media. Journal of Biosciences, 40 (1). p. 1. ISSN 0250-5991

Arora, Richa and Aggarwal, Shagun and Deme, Swaroopa (2015) Ghosal hematodiaphyseal dysplasia. A concise review including an illustrative patient. Skeletal Radiology, 44 (3). pp. 447-450. ISSN 0364-2348

Swarna Gowri, Thota and Unnikannan, C.P. and Sitalakshmi, R.T. and Manorama, R. and Bhandari, Rashna (2015) Inositol pyrophosphates regulate RNA polymerase I-mediated rRNA transcription in Saccharomyces cerevisiae. Biochemical Journal, 466 (1). pp. 105-14. ISSN 1470-8728

Aggarwal, Shagun and Kar, A. and Bland, P. and Kelsell, D. and Dalal, Ashwin (2015) Novel ABCA12 mutations in harlequin ichthyosis: a journey from photo diagnosis to prenatal diagnosis. Gene, 556 (2). pp. 254-256. ISSN 1879-0038

Shashi Kiran, and Oddi, V. and Ramakrishna, Gayatri (2015) Sirtuin 7 promotes cellular survival following genomic stress by attenuation of DNA damage, SAPK activation and p53 response. Experimental Cell Research, 331 (1). pp. 123-141. ISSN 1090-2422

Ramasarma, T. and Rao, A.V.S. and Devi, M.M. and Omkumar, R.V. and Bhagyashree, K.S. and Bhat, S.V. (2015) New insights of superoxide dismutase inhibition of pyrogallol autoxidation. Molecular and Cellular Biochemistry, 400 (1-2). pp. 277-285. ISSN 1573-4919

Rai, M.N. and Sharma, V. and Balusu, S. and Kaur, Rupinder (2015) An essential role for phosphatidylinositol 3-kinase in the inhibition of phagosomal maturation, intracellular survival and virulence inCandida glabrata. Cellular Microbiology, 17 (2). pp. 269-287. ISSN 1462-5814

Ghosh, C. and Prakash, N.R. and Manna, S.K. and Bishayi, B. (2015) Presence of Toll Like Receptor-2 in spleen, lymph node and thymus of Swiss albino mice and its modulation by Staphylococcus aureus and bacterial lipopolysaccharide. Indian Journal of Experimental Biology, 53 (2). pp. 82-92. ISSN 0019-5189

Pereira, J. and Porto-Figueira, P. and Cavaco, C. and Taunk, K. and Rapole, S. and Dhakne, R. and Nagarajaram, H.A. and Câmara, J.S. (2015) Breath analysis as a potential and non-invasive frontier in disease diagnosis: an overview. Metabolites, 5 (1). pp. 3-55. ISSN 2218-1989

Gowrishankar, J. (2015) End of the Beginning: Elongation and Termination Features of Alternative Modes of Chromosomal Replication Initiation in Bacteria. PLOS Genetics, 11 (1). e1004909. ISSN 1553-7390

Kalyani, B.S. and Kunamneni, R. and Wal, Megha and Ranjan, Amitabh and Sen, Ranjan (2015) A NusG paralogue from Mycobacterium tuberculosis, Rv0639, has evolved to interact with ribosomal protein S10 (Rv0700) but not to function as a transcription elongation-termination factor. Microbiology (Reading, England), 161 (Pt 1). pp. 67-83. ISSN 1465-2080

Stephen, J. and Girisha, K.M. and Dalal, Ashwin and Shukla, A. and Shah, H. and Srivastava, P. and Kornak, U. and Phadke, S.R. (2015) Mutations in patients with osteogenesis imperfecta from consanguineous Indian families. European Journal of Medical Genetics, 58 (1). pp. 21-27. ISSN 1878-0849

Dalal, Ashwin and Ranganath, P. and Phadke, S.R. and Kabra, M. and Danda, S. and Puri, R.D. and Sankar, V.H. and Gupta, N. and Patil, S.J. and Mandal, K. and Tamhankar, P.M. and Aggarwal, Shagun and Agarwal, Meenal (2015) Prenatal diagnosis in India is not limited to sex selection. Genetics in Medicine, 17 (1). p. 88. ISSN 1098-3600

Salvemini, M. and Arunkumar, K.P. and Nagaraju, J. (2014) De Novo Assembly and Transcriptome Analysis of the Mediterranean Fruit Fly Ceratitis capitata Early Embryos. PLoS One, 9 (12). e114191. ISSN 1932-6203

Bashyam, M.D. and Chaudhary, A.K. and Kiran, M. and Reddy, V. and Nagarajaram, H.A. and Dalal, Ashwin and Bashyam, L. and Sun, D. and Gupta, A. and Gupta, N. and Kabra, M. and Puri, R.D. and Radha Rama Devi, A. and Kapoor, S. and Danda, S. (2014) Molecular analyses of novel ASAH1 mutations causing Farber lipogranulomatosis: analyses of exonic splicing enhancer inactivating mutation. Clinical Genetics, 86 (6). pp. 530-538. ISSN 1399-0004

Mahali, S.K. and Verma, N. and Manna, S.K. (2014) Advanced Glycation End Products Induce Lipogenesis: Regulation by Natural Xanthone through Inhibition of ERK and NF-kappa B. Journal of Cellular Physiology, 229 (12). pp. 1972-1980. ISSN 1097-4652

Bidchol, A.M. and Dalal, Ashwin and Shah, H. and Suryanarayana, S. and Nampoothiri, S. and Kabra, M. and Gupta, N. and Danda, S. and Gowrishankar, K. and Phadke, S.R. and Kapoor, S. and Kamate, M. and Verma, I.C. and Puri, R.D. and Sankar, V.H. and Radha Rama Devi, A. and Patil, S.J. and Ranganath, P. and Jain, S.J.M.N. and Agarwal, Meenal and Singh, Ankur and Mishra, P. and Tamhankar, P.M. and Gopinath, P.M. and Nagarajaram, H.A. and Satyamoorthy, K. and Girisha, K.M. (2014) GALNS Mutations in Indian Patients With Mucopolysaccharidosis IVA. American Journal of Medical Genetics Part A, 164A (11). pp. 2793-2801. ISSN 1552-4833

Patil, S.J. and Rai, G.K. and Bhat, V. and Ramesh, V.A. and Nagarajaram, H.A. and Matalia, J. and Phadke, S.R. (2014) Distal Arthrogryposis Type 5D With a Novel ECEL1 Gene Mutation. American Journal of Medical Genetics Part A, 164A (11). pp. 2857-2862. ISSN 1552-4833

Ram, B.M. and Ramakrishna, Gayatri (2014) Endoplasmic reticulum vacuolation and unfolded protein response leading to paraptosis like cell death in cyclosporine A treated cancer cervix cells is mediated by cyclophilin B inhibition. Biochimica et Biophysica Acta - Molecular Cell Research , 1843 (11). pp. 2497-2512. ISSN 0167-4889

Sreejit, G. and Ahmed, A. and Parveen, N. and Jha, V. and Valluri, V.L. and Ghosh, S. and Mukhopadhyay, Sangita (2014) The ESAT-6 Protein of Mycobacterium tuberculosis Interacts with Beta-2-Microglobulin (β2M) Affecting Antigen Presentation Function of Macrophage. PLoS Pathogens, 10 (10). e1004446. ISSN 1553-7374

Srivastava, V.K. and Suneetha, K.J. and Kaur, Rupinder (2014) A systematic analysis reveals an essential role for high-affinity iron uptake system, haemolysin and CFEM domain-containing protein in iron homoeostasis and virulence in Candida glabrata. Biochemical Journal, 463 (1). pp. 103-114. ISSN 0264-6021

Adduri, R.S. and Viswakalyan, K. and Rajender, K.K. and Gowrishankar, S. and Pyne, S. and Srinivasulu, M. and Rao, S. and Uppin, S.G. and Ali, M.M. and Nayak, U.K. and Dhagam, S. and Mohana Vamsy, C. and Bashyam, M.D. (2014) Clinical and molecular genetic analysis of squamous cell carcinoma of the oral tongue. Cancer Research, 74 (19 Sup). p. 1883. ISSN 0008-5472

Bashyam, M.D. and Viswakalyan, K. and Raman, R. and Yadav, B.K. and Chaudhary, A.K. and Gowrishankar, S. and Uppin, S.G. and Kongara, R. and Sastry, R.A. and Mohana Vamsy, C. and Patnaik, S. and Dsouza, S. and Desai, D.C. and Ashavaid, T. (2014) Identification of MMR gene exonic rearrangements in suspected Lynch syndrome tumors without loss of MMR expression. Cancer Research, 74 (19 Sup). p. 1285. ISSN 0008-5472

Borah, S. and Shivarathri, R. and Srivastava, V.K. and Ferrari, S. and Sanglard, D. and Kaur, Rupinder (2014) Pivotal Role for a Tail Subunit of the RNA Polymerase II Mediator Complex CgMed2 in Azole Tolerance and Adherence in Candida glabrata. Antimicrobial Agents and Chemotherapy, 58 (10). pp. 5976-5986. ISSN 0066-4804

Chaudhary, Neelam and Subba Reddy, Maddika (2014) WWP2-WWP1 Ubiquitin Ligase Complex Coordinated by PPM1G Maintains the Balance between Cellular p73 and Delta Np73 Levels. Molecular and Cellular Biology, 34 (19). pp. 3754-3764. ISSN 0270-7306

Sinha, A. and Nagarajaram, H.A. (2014) Nodes occupying central positions in human tissue specific PPI networks are enriched with many splice variants. Proteomics, 14 (20). pp. 2242-2248. ISSN 1615-9853

Shashni, R. and Qayyum, M.Z. and Vishalini, V. and Dey, D. and Sen, Ranjan (2014) Redundancy of primary RNA-binding functions of the bacterial transcription terminator Rho. Nucleic Acids Research, 42 (15). pp. 9677-9690. ISSN 0305-1048

Adduri, R.S.R. and Kotapalli, V. and Gupta, N.A. and Gowrishankar, S. and Srinivasulu, M. and Ali, M. and Rao, S. and Uppin, S.G. and Nayak, U.K. and Dhagam, S. and Mohana Vamsy, C. and Bashyam, M.D. (2014) P53 nuclear stabilization is associated with FHIT loss and younger age of onset in squamous cell carcinoma of oral tongue. BMC Clinical Pathology, 14 (1). p. 37. ISSN 1472-6890

Nandagopalan, R.S. and Phadke, S.R. and Dalal, Ashwin and Ranganath, P. (2014) Novel mutations in PRG4 gene in two Indian families with camptodactyly-arthropathy- coxa vara- pericarditis (CACP) syndrome. Indian Journal of Medical Research, 140 (2). pp. 221-226. ISSN 0971-5916

Jangam Reddy, J.R. and Panigrahi, S. and Lotfi, K. and Yadav, M. and Subba Reddy, Maddika and Tripathi, A.K. and Sanyal, S. and Łos, M.J. (2014) Mapping of apoptin-interaction with BCR-ABL1, and development of apoptin-based targeted therapy. Oncotarget, 5 (16). pp. 7198-7211. ISSN 1949-2553

Satyavathi, V.V. and Minz, A. and Nagaraju, J. (2014) Nodulation: an unexplored cellular defense mechanism in insects. Cellular Signalling, 26 (8). pp. 1753-63. ISSN 1873-3913

Ballantyne, K.N. and Ralf, A. and Aboukhalid, R. and Achakzai, N.M. and Anjos, M.J. and Ayub, Q. and Balažic, J. and Ballantyne, J. and Ballard, D.J. and Berger, B. and Bobillo, C. and Bouabdellah, M. and Burri, H. and Capal, T. and Caratti, S. and Cárdenas, J. and Cartault, F. and Carvalho, E.F. and Carvalho, M. and Cheng, B. and Coble, M.D. and Comas, D. and Corach, D. and D'Amato, M.E. and Davison, S. and de Knijff, P. and De Ungria, M.C.A. and Decorte, R. and Dobosz, T. and Dupuy, B.M. and Elmrghni, S. and Gliwiński, M. and Gomes, S.C. and Grol, L. and Haas, C. and Hanson, E. and Henke, J. and Henke, L. and Herrera-Rodríguez, F. and Hill, C.R. and Holmlund, G. and Honda, K. and Immel, U.D. and Inokuchi, S. and Jobling, M.A. and Kaddura, M. and Kim, J.S. and Kim, S.H. and Kim, W. and King, T.E. and Klausriegler, E. and Kling, D. and Kovačević, L. and Kovatsi, L. and Krajewski, P. and Kravchenko, S. and Larmuseau, M.H.D. and Lee, E.Y. and Lessig, R. and Livshits, L.A. and Marjanović, D. and Minarik, M. and Mizuno, N. and Moreira, H. and Morling, N. and Mukherjee, M. and Munier, P. and Nagaraju, J. and Neuhuber, F. and Nie, S. and Nilasitsataporn, P. and Nishi, T. and Oh, H.H. and Olofsson, J. and Onofri, V. and Palo, J.U. and Pamjav, H. and Parson, W. and Petlach, M. and Phillips, C. and Ploski, R. and Prasad, S.P.R. and Primorac, D. and Purnomo, G.A. and Purps, J. and Rangel-Villalobos, H. and Rębała, K. and Rerkamnuaychoke, B. and Gonzalez, D.R. and Robino, C. and Roewer, L. and Rosa, A. and Sajantila, A. and Sala, A. and Salvador, J.M. and Sanz, P. and Schmitt, C. and Sharma, A.K. and Silva, D.A. and Shin, K.J. and Sijen, T. and Sirker, M. and Siváková, D. and Skaro, V. and Solano-Matamoros, C. and Souto, L. and Stenzl, V. and Sudoyo, H. and Syndercombe-Court, D. and Tagliabracci, A. and Taylor, D. and Tillmar, A. and Tsybovsky, I.S. and Tyler-Smith, C. and van der Gaag, K.J. and Vanek, D. and Völgyi, A. and Ward, D. and Willemse, P. and Yap, E.P.H. and Yong, R.Y.Y. and Pajnič, I.Z. and Kayser, M. (2014) Toward male individualization with rapidly mutating y-chromosomal short tandem repeats. Human Mutation, 35 (8). pp. 1021-32. ISSN 1098-1004

Sackton, T.B. and Corbett-Detig, R.B. and Nagaraju, J. and Vaishna, L. and Arunkumar, K.P. and Hartl, D.L.. (2014) Positive selection drives faster-Z evolution in silkmoths. Evolution, 68 (8). pp. 2331-2342. ISSN 0014-3820

Raman, R. and Kongara, R. and Kotapalli, V. and Gowrishankar, S. and Sastry, R.A. and Nagari, B. and Bashyam, M.D. (2014) Pathological stage significantly predicts survival in colorectal cancer patients: a study from two tertiary care centers in India. Colorectal Cancer, 3 (3). pp. 265-275. ISSN 1758-194X

Rachita, H R. and Nagarajaram, H.A. (2014) Viral proteins that bridge unconnected proteins and components in the human PPI network. Molecular BioSystems, 10 (9). pp. 2448-2458. ISSN 1742-206X

Ali, A. and Veeranki, S.N. and Tyagi, Shweta (2014) A SET-domain-independent role of WRAD complex in cell-cycle regulatory function of mixed lineage leukemia. Nucleic Acids Research, 42 (12). pp. 7611-7624. ISSN 0305-1048

Raviprakash, N. and Manna, S.K. (2014) Short-term exposure to oleandrin enhances responses to IL-8 by increasing cell surface IL-8 receptors. British Journal of Pharmacology, 171 (14). pp. 3339-51. ISSN 1476-5381

Sundaram, R.M. and Chatterjee, Subhadeep and Oliva, R. and Laha, G. and Cruz, C. and Leach, J.E. and Sonti, R.V. (2014) Update on Bacterial Blight of Rice: Fourth International Conference on Bacterial Blight. Rice, 7 (1). p. 12. ISSN 1939-8433

Shah, A.H. and Singh, Ashutosh and Dhamgaye, S. and Chauhan, N. and Vandeputte, P. and Suneetha, K.J. and Kaur, Rupinder and Mukherjee, P.K. and Chandra, J. and Ghannoum, M.A. and Sanglard, D. and Goswami, S.K. and Prasad, R. (2014) Novel role of a family of major facilitator transporters in biofilm development and virulence of Candida albicans. Biochemical journal, 460 (2). pp. 223-235. ISSN 1470-8728

Aggarwal, Shagun and Coutinho, M.F. and Dalal, Ashwin and Jain, S.J.M.N. and Prata, M.J. and Alves, S. (2014) Prenatal skeletal dysplasia phenotype in severe MLII alpha/beta with novel GNPTAB mutation. Gene, 542 (2). pp. 266-268. ISSN 1879-0038

Kasbekar, D.P. (2014) Are any fungal genes nucleus-limited? Journal of Biosciences, 39 (3). pp. 341-346. ISSN 0250-5991

Singh, C.P. and Singh, J. and Nagaraju, J. (2014) bmnpv-miR-3 facilitates BmNPV infection by modulating the expression of viral P6.9 and other late genes in Bombyx mori. Insect Biochemistry and Molecular Biology, 49. pp. 59-69. ISSN 1879-0240

Kantaputra, P.N. and Kayserili, H. and Guven, Y. and Kantaputra, W. and Balci, M.C. and Tanpaiboon, P. and Tananuvat, N. and Uttarilli, Anusha and Dalal, Ashwin (2014) Clinical manifestations of 17 patients affected with mucopolysaccharidosis type VI and eight novelARSBmutations. American Journal of Medical Genetics Part A, 164 (6). pp. 1443-1453. ISSN 1552-4825

Tsurusaki, Y. and Okamoto, N. and Ohashi, H. and Mizuno, S. and Matsumoto, N. and Makita, Y. and Fukuda, M. and Isidor, B. and Perrier, J. and Aggarwal, Shagun and Dalal, Ashwin and Al-Kindy, A. and Liebelt, J. and Mowat, D. and Nakashima, M. and Saitsu, H. and Miyake, N. and Matsumoto, N. (2014) Coffin-Siris syndrome is a SWI/SNF complex disorder. Clinical Genetics, 85 (6). pp. 548-554. ISSN 1399-0004

Stephen, J. and Shukla, A. and Dalal, Ashwin and Girisha, K.M. and Shah, H. and Gupta, N. and Kabra, M. and Dabadghao, P. and Phadke, S.R. (2014) Mutation spectrum of COL1A1 and COL1A2 genes in Indian patients with osteogenesis imperfecta. American Journal of Medical Genetics. Part A, 164A (6). pp. 1482-1489. ISSN 1552-4833

Pradhan, B.B. and Chatterjee, Subhadeep (2014) Reversible non-genetic phenotypic heterogeneity in bacterial quorum sensing. Molecular Microbiology, 92 (3). pp. 557-69. ISSN 1365-2958

Naushad, S.M. and Krishnaprasad, C. and Radha Rama Devi, A. (2014) Adaptive developmental plasticity in methylene tetrahydrofolate reductase (MTHFR) C677T polymorphism limits its frequency in South Indians. Molecular Biology Reports, 41 (5). pp. 3045-50. ISSN 1573-4978

Basu, A. and Dasari, V. and Mishra, R.K. and Khosla, Sanjeev (2014) The CpG island encompassing the promoter and first exon of human DNMT3L gene is a PcG/TrX response element (PRE). PloS one, 9. e93561. ISSN 1932-6203

Dutta, Usha and Vempally, S. and Ranganath, P. and Dalal, Ashwin (2014) A novel combined 15q11.2 duplication and a bisatellited supernumerary marker derived from chromosome 22: molecular characterization of the marker. Gene, 539 (1). pp. 162-7. ISSN 1879-0038

Sharma, V. and Nandineni, M.R. (2014) Assessment of genetic diversity among Indian potato (Solanum tuberosum L.) collection using microsatellite and retrotransposon based marker systems. Molecular Phylogenetics and Evolution, 73. pp. 10-7. ISSN 1095-9513

Dutta, Usha and Rajitha, Ponnala and Dalal, Ashwin (2014) A Novel de novo Balanced Reciprocal Translocation t(18;22) Associated with Recurrent Miscarriages: A Case Report. Journal of Reproduction and Infertility, 15 (2). pp. 113-116. ISSN 2251-676X

Bairwa, G. and Rasheed, M. and Taigwal, R. and Sahoo, R. and Kaur, Rupinder (2014) GPI (glycosylphosphatidylinositol)-linked aspartyl proteases regulate vacuole homoeostasis in Candida glabrata. Biochemical journal, 458 (2). pp. 323-34. ISSN 1470-8728

Khursheed, M. and Bashyam, M.D. (2014) Apico-basal polarity complex and cancer. Journal of Biosciences, 39 (1). pp. 145-55. ISSN 0973-7138

Kasbekar, D.P. (2014) Lesser models [Editorial]. Journal of Biosciences, 39 (1). p. 1. ISSN 0973-7138

Nagaraju, J. and Gopinath, G. and Sharma, V. and Shukla, J.N. (2014) Lepidopteran sex determination: a cascade of surprises. Sexual Development, 8 (1-3). pp. 104-12. ISSN 1661-5433

Abraham, P.R. and Latha, G.S. and Valluri, V.L. and Mukhopadhyay, Sangita (2014) Mycobacterium tuberculosis PPE protein Rv0256c induces strong B cell response in tuberculosis patients. Infection, Genetics and Evolution, 22. pp. 244-9. ISSN 1567-7257

Bashyam, M.D. and Chaudhary, A.K. and Kiran, M. and Nagarajaram, H.A. and Radha Rama Devi, A. and Ranganath, P. and Dalal, Ashwin and Bashyam, L. and Gupta, N. and Kabra, M. and Muranjan, M. and Puri, R.D. and Verma, I.C. and Nampoothiri, S. and Kadandale, J.S. (2014) Splice, insertion-deletion and nonsense mutations that perturb the phenylalanine hydroxylase transcript cause phenylketonuria in India. Journal of Cellular Biochemistry, 115 (3). pp. 566-74. ISSN 1097-4644

Kantaputra, P.N. and Kayserili, H. and Guven, Y. and Kantaputra, W. and Balci, M.C. and Tanpaiboon, P. and Uttarilli, Anusha and Dalal, Ashwin (2014) Oral manifestations of 17 patients affected with mucopolysaccharidosis type VI. Journal of Inherited Metabolic Disease, 37 (2). pp. 263-8. ISSN 1573-2665

Hegde, S.R. and Pal, K. and Mande, S.C. (2014) Differential enrichment of regulatory motifs in the composite network of protein-protein and gene regulatory interactions. BMC Systems Biology, 8. p. 26. ISSN 1752-0509

Ramasarma, T. (2014) Trendy science research communications [Commentary]. Current Science , 106 (4). pp. 506-508. ISSN 0011-3891

Mudunuri, S.B. and Patnana, S. and Nagarajaram, H.A. (2014) MICdb3.0: a comprehensive resource of microsatellite repeats from prokaryotic genomes. Database : the Journal of Biological Databases and Curation, 2014. bau005. ISSN 1758-0463

Mon, H. and Lee, J.M. and Mita, K. and Goldsmith, M.R. and Kusakabe, T. (2014) Chromatin-induced spindle assembly plays an important role in metaphase congression of silkworm holocentric chromosomes. Insect Biochemistry and Molecular Biology, 45. pp. 40-50. ISSN 1879-0240

Das, T. and Sahu, N.P. and Chakraborty, S.K. and Chatterjee, N. and Mohammed, M.S. and Dalvi, R.S. and Baruah, K. and Pal, A.K. (2014) Ultrastructural alterations in the gills of Labeo rohita fingerlings exposed to thermal extremes. Anatomia, Histologia, Embryologia, 43 (1). pp. 75-80. ISSN 1439-0264

Raman, R. and Kotapalli, V. and Adduri, R.S.R. and Gowrishankar, S. and Bashyam, L. and Chaudhary, A. and Mohana Vamsy, C. and Patnaik, S. and Srinivasulu, M. and Sastry, R.A. and Rao, S. and Vasala, A. and Kalidindi, N.R. and Pollack, J.R. and Murthy, S. and Bashyam, M.D. (2014) Evidence for possible non-canonical pathway(s) driven early-onset colorectal cancer in India. Molecular Carcinogenesis, 53 (S1). E181-E186. ISSN 1098-2744

Basu Baul, T.S. and Kundu, S. and Linden, A. and Raviprakash, N. and Manna, S.K. and Guedes da Silva, M.F.C. (2014) Synthesis and characterization of some water soluble Zn(II) complexes with (E)-N-(pyridin-2-ylmethylene)arylamines that regulate tumour cell death by interacting with DNA. Dalton Transactions , 43 (3). pp. 1191-202. ISSN 1477-9234

Love, J.M. and Prosser, D. and Love, D.R. and Krishnaprasad, C. and Dalal, Ashwin and Aggarwal, Shagun (2014) A novel glycine decarboxylase gene mutation in an Indian family with nonketotic hyperglycinemia. Journal of Child Neurology, 29 (1). pp. 122-7. ISSN 1708-8283

Phulera, S. and Akif, M. and Sardesai, A.A. and Mande, S.C. (2014) Redox Proteins of Mycobacterium tuberculosis. Journal of the Indian Institute of Science, 94 (1). pp. 127-137. ISSN 0970-4140

Singh, C.P. and Vaishna, L. and Kakkar, A. and Arunkumar, K.P. and Nagaraju, J. (2014) Characterization of antiviral and antibacterial activity of Bombyx mori seroin proteins. Cellular Microbiology, 16 (9). pp. 1354-1365. ISSN 1462-5822

Adduri, R.S.R. and Katamoni, R. and Pandilla, R. and Madana, S.N. and Paripati, A.K. and Kotapalli, V. and Bashyam, M.D. (2014) TP53 Pro72 allele is enriched in oral tongue cancer and frequently mutated in esophageal cancer in India. PloS one, 9 (12). e114002. ISSN 1932-6203

Dalal, Ashwin (2014) Molecular cytogenetic characterization of chromosomal rearrangements - utility in genetic counseling and research. Molecular Cytogenetics, 7 (Suppl ). I12. ISSN 1755-8166

Archak, S. and Nagaraju, J. (2014) Computational analyses of protein coded by rice (Oryza sativa japonica) cDNA (GI: 32984786) indicate lectin like Ca(2+) binding properties for Eicosapenta Peptide Repeats (EPRs). Bioinformation, 10 (2). pp. 63-67. ISSN 0973-2063

Pandey, S.D. and Choudhury, Mitali and Yousuf, S. and Wheeler, P.R. and Gordon, S.V. and Ranjan, Akash and Sritharan, Manjula (2014) Iron-Regulated Protein HupB of Mycobacterium tuberculosis Positively Regulates Siderophore Biosynthesis and Is Essential for Growth in Macrophages. Journal of Bacteriology, 196 (10). pp. 1853-1865. ISSN 0021-9193

Raman, R. and Kotapalli, V. and Mohana Vamsy, C. and Patnaik, S.C. and Srinivasulu, M. and Bashyam, M.D. (2014) A positive family history of cancer or lifestyle factors may not explain the high incidence of early-onset colorectal cancer in India. Colorectal Cancer, 3 (5). pp. 409-416. ISSN 1758-194X

Saranathan, R. and Tomar, A. and Sudhakar, P. and Arunkumar, K.P. and Prashanth, K. (2014) Draft Genome Sequence of a Multidrug-Resistant Acinetobacter baumannii PKAB07 Clinical Strain from India Belonging to Sequence Type 195. Genome Announcements, 2 (2). e00184-14. ISSN 2169-8287

Narmadha Reddy, G. and Subba Reddy, Maddika (2013) WD Repeat Protein WDR48 in Complex with Deubiquitinase USP12 Suppresses Akt-dependent Cell Survival Signaling by Stabilizing PH Domain Leucine-rich Repeat Protein Phosphatase 1 (PHLPP1). Journal of Biological Chemistry, 288 (48). pp. 34545-34554. ISSN 0021-9258

Rai, M.N. and Borah, S. and Bairwa, G. and Sriram, B. and Neelima, G. and Kaur, Rupinder (2013) Establishment of an in vitro system to study intracellular behavior of Candida glabrata in human THP-1 macrophages. Journal of Visualized Experiments (82). e50625. ISSN 1940-087X

Shinde, S.R. and Narmadha Reddy, G. and Sridhar, K. and Pandey, V. and Subba Reddy, Maddika (2013) TOPK and PTEN participate in CHFR mediated mitotic checkpoint. Cellular Signalling, 25 (12). pp. 2511-2517. ISSN 0898-6568

Ramaswamy, P. and Viswakalyan, K. and Gowrishankar, S. and Mohana Vamsy, C. and Patnaik, S. and Uppin, S.G. and Rao, S. and Raju, K.N. and Sastry, R.A. and Sundaram, C. and Srinivasulu, M. and Anjayneyulu, V. and Bashyam, M.D. (2013) Distinct genetic aberrations in oesophageal adeno and squamous carcinoma. European Journal of Clinical Investigation, 43 (12). pp. 1233-1239. ISSN 0014-2972

Kiran, M. and Nagarajaram, H.A. (2013) Global versus Local Hubs in Human Protein–Protein Interaction Network. Journal of Proteome Research, 12 (12). pp. 5436-5446. ISSN 1535-3893

Bashyam, M.D. and Raman, R. (2013) Molecular Origins of Colon and Rectal Cancer: Not a Wnt–Wnt Situation. Current Colorectal Cancer Reports, 9 (4). pp. 365-371. ISSN 1556-3790

Zhang, J. and Zhang, P. and Wei, Y. and Piao, H.-L. and Wang, W. and Subba Reddy, Maddika and Wang, M. and Chen, D. and Sun, Y. and Hung, M.-C. and Chen, J. and Ma, Li (2013) Deubiquitylation and stabilization of PTEN by USP13. Nature Cell Biology, 15 (12). pp. 1486-1494. ISSN 1465-7392

Aggarwal, Shagun (2013) Skeletal dysplasias with increased bone density: Evolution of molecular pathogenesis in the last century. Gene, 528 (1). pp. 41-45. ISSN 0378-1119

Aggarwal, Shagun and Uttarilli, Anusha and Dalal, Ashwin (2013) GAPO syndrome with deafness. Clinical Dysmorphology, 22 (4). pp. 161-163. ISSN 0962-8827

Naushad, S.M. and Jain, J.M.N. and Krishnaprasad, C. and Naik, U. and Radha Rama Devi, A. (2013) Autistic children exhibit distinct plasma amino acid profile. Indian Journal of Biochemistry and Biophysics, 50 (5). pp. 474-478. ISSN 0301-1208

Mishra, S. and Mohan, S. and Godavarthi, S. and Sen, Ranjan (2013) The Interaction Surface of a Bacterial Transcription Elongation Factor Required for Complex Formation with an Antiterminator during Transcription Antitermination. Journal of Biological Chemistry, 288 (39). pp. 28089-28103. ISSN 0021-9258

Suetsugu, Y. and Futahashi, R. and Kanamori, H. and Kadono-Okuda, K. and Sasanuma, S.-i. and Narukawa, J. and Ajimura, M. and Jouraku, A. and Namiki, N. and Shimomura, M. and Sezutsu, H. and Osanai-Futahashi, M. and Suzuki, M.G. and Daimon, T. and Shinoda, T. and Taniai, K. and Asaoka, K. and Niwa, R. and Kawaoka, S. and Katsuma, S. and Tamura, T. and Noda, H. and Kasahara, M. and Sugano, S. and Suzuki, Y. and Fujiwara, H. and Kataoka, H. and Arunkumar, K.P. and Tomar, A. and Nagaraju, J. and Goldsmith, M.R. and Feng, Q. and Xia, Q. and Yamamoto, K. and Shimada, T. and Mita, K. (2013) Large Scale Full-Length cDNA Sequencing Reveals a Unique Genomic Landscape in a Lepidopteran Model Insect, Bombyx mori. G3 Genes Genomes Genetics, 3 (9). pp. 1481-1492. ISSN 2160-1836

Sarkar, P. and Sardesai, A.A. and Murakami, K.S. and Chatterji, D. (2013) Inactivation of the Bacterial RNA Polymerase Due to Acquisition of Secondary Structure by the Subunit. Journal of Biological Chemistry, 288 (35). pp. 25076-25087. ISSN 0021-9258

Parveen, N. and Varman, R. and Nair, S. and Das, G. and Ghosh, S. and Mukhopadhyay, Sangita (2013) Endocytosis of Mycobacterium tuberculosis Heat Shock Protein 60 Is Required to Induce Interleukin-10 Production in Macrophages. Journal of Biological Chemistry, 288 (34). pp. 24956-24971. ISSN 0021-9258

Ghosh, S. and Shukla, D. and Suman, K. and Lakshmi, B.J. and Manorama, R. and Kumar, S. and Bhandari, Rashna (2013) Inositol hexakisphosphate kinase 1 maintains hemostasis in mice by regulating platelet polyphosphate levels. Blood, 122 (8). pp. 1478-1486. ISSN 0006-4971

Kaur, Rupinder (2013) Annual Review of Microbiology, 2012. Susan Gottesman, Caroline S. Harwood and Olaf Schneewind (eds). Current Science, 105 (3). pp. 390-391. ISSN 0011-3891

Kamal, M.Z. and Ali, J. and Rao, N.M. (2013) Binding of bis-ANS to Bacillus subtilis lipase: A combined computational and experimental investigation. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 1834 (8). pp. 1501-1509. ISSN 1570-9639

Ranjan, Amitabh and Sharma, S. and Banerjee, R. and Sen, U. and Sen, Ranjan (2013) Structural and mechanistic basis of anti-termination of Rho-dependent transcription termination by bacteriophage P4 capsid protein Psu. Nucleic Acids Research, 41 (14). pp. 6839-6856. ISSN 0305-1048

Yonemura, N. and Tamura, T. and Uchino, K. and Kobayashi, I. and Tatematsu, K.-I. and Iizuka, T. and Tsubota, T. and Sezutsu, H. and Muthulakshmi, M. and Nagaraju, J. and Kusakabe, T. (2013) phiC31-integrase-mediated, site-specific integration of transgenes in the silkworm, Bombyx mori (Lepidoptera: Bombycidae). Applied Entomology and Zoology, 48 (3). pp. 265-273. ISSN 0003-6862

Kuna, R.S. and Girada, S.B. and Asalla, S. and Vallentyne, J. and Subba Reddy, Maddika and Patterson, J.T. and Smiley, D.L. and DiMarchi, R.D. and Mitra, P. (2013) Glucagon-like peptide-1 receptor-mediated endosomal cAMP generation promotes glucose-stimulated insulin secretion in pancreatic -cells. American Journal of Physiology - Endocrinology and Metabolism, 305 (2). E161-E170. ISSN 0193-1849

Gowrishankar, J. and Krishna Leela, J. and Anupama, K. (2013) R-loops in bacterial transcription. Transcription, 4 (4). pp. 153-157. ISSN 2154-1264

Shashi Kiran, and Chatterjee, Nirupama and Singh, Sapna and Kaul, S.C. and Wadhwa, Renu and Ramakrishna, Gayatri (2013) Intracellular distribution of human SIRT7 and mapping of the nuclear/nucleolar localization signal. FEBS Journal, 280 (14). pp. 3451-3466. ISSN 1742-464X

Nagasowjanya, T. and Raj, K.B. and Sreethi Reddy, K. and Kasbekar, D.P. (2013) An apparent increase in meiotic silencing strength in crosses involving inbred Neurospora crassa strains. Fungal Genetics and Biology, 56. pp. 158-162. ISSN 1087-1845

Khursheed, M. and Kolla, J.N. and Kotapalli, V. and Gupta, N. and Gowrishankar, S. and Uppin, S.G. and Sastry, R.A. and Koganti, S. and Sundaram, C. and Pollack, J.R. and Bashyam, M.D. (2013) ARID1B, a member of the human SWI/SNF chromatin remodeling complex, exhibits tumour-suppressor activities in pancreatic cancer cell lines. British Journal of Cancer, 108 (10). pp. 2056-2062. ISSN 0007-0920

Dutta, Usha and Vijaya Kumar, P. and Goud, Ch.V. and Hoefers, C. and Hagemann, M. and Dalal, Ashwin (2013) Identification and molecular cytogenetic characterization of a novel complex Y chromosome rearrangement in a boy with disorder of sexual development. Gene, 519 (2). pp. 374-380. ISSN 0378-1119

Dutta, Usha and Rajitha, Ponnala and Vijaya Kumar, P. and Dalal, Ashwin (2013) Chromosomal abnormalities in amenorrhea: a retrospective study and review of 637 patients in South India. Archives of Iranian medicine, 16 (5). pp. 267-70. ISSN 1735-3947

Sinha, A. and Nagarajaram, H.A. (2013) Effect of Alternative Splicing on the Degree Centrality of Nodes in Protein–Protein Interaction Networks ofHomo sapiens. Journal of Proteome Research, 12 (4). pp. 1980-1988. ISSN 1535-3893

Chaitanya, M. and Babajan, B. and Madhusudana, P. and Anuradha, C.M. and Rao, R.M. and Prakash, N.R. and Manna, S.K. and Naveen, M. and Kumar, C.S. (2013) Synthesis and evaluation of resveratrol derivatives as new chemical entities for cancer. Journal of Molecular Graphics and Modelling, 41. pp. 43-54. ISSN 1093-3263

Ranjan, Amitabh and Banerjee, R. and Pani, B. and Sen, Udayaditya and Sen, Ranjan (2013) The moonlighting function of bacteriophage P4 capsid protein, Psu, as a transcription antiterminator. Bacteriophage, 3 (2). e25657. ISSN 2159-7081

Ranganath, P. and Dalal, Ashwin (2013) Congenital metacarpal pseudoarthrosis, cleft palate, short stature, advanced bone age, and genu valgum. Clinical Dysmorphology, 22 (2). pp. 73-75. ISSN 0962-8827

Bhat, K.H. and Das, A. and Aparna, S. and Mukhopadhyay, Sangita (2013) PPE2 protein ofMycobacterium tuberculosismay inhibit nitric oxide in activated macrophages. Annals of the New York Academy of Sciences, 1283 (1). pp. 97-101. ISSN 0077-8923

Balakrishna, D. and Krishna Tulasi, K. and Rathore, V. and Deora, G.S. and Sridhar, K. and Subba Reddy, Maddika and Chatti, K. and Reiser, O. and Iqbal, J. and Pal, M. (2013) Synthesis and evaluation of 3-amino/guanidine substituted phenyl oxazoles as a novel class of LSD1 inhibitors with anti-proliferative properties. Organic & Biomolecular Chemistry, 11 (19). pp. 3103-3107. ISSN 1477-0520

Jadav, R.S. and Chanduri, M.V.L. and Sengupta, S. and Bhandari, Rashna (2013) Inositol Pyrophosphate Synthesis by Inositol Hexakisphosphate Kinase 1 Is Required for Homologous Recombination Repair. Journal of Biological Chemistry, 288 (5). pp. 3312-3321. ISSN 0021-9258

Acharya, V. and Nagarajaram, H.A. (2013) Response to: Statistical Analysis of Missense Mutation Classifiers. Human Mutation, 34 (2). p. 407. ISSN 1059-7794

Muley, V.Y. and Ranjan, Akash (2013) Evaluation of Physical and Functional Protein-Protein Interaction Prediction Methods for Detecting Biological Pathways. PLoS ONE, 8 (1). e54325. ISSN 1932-6203

Krishna Leela, J. and Syeda, A.H. and Anupama, K. and Gowrishankar, J. (2013) Rho-dependent transcription termination is essential to prevent excessive genome-wide R-loops in Escherichia coli. Proceedings of the National Academy of Sciences (USA), 110 (1). pp. 258-263. ISSN 0027-8424

Sridhar, K. and Shinde, S.R. and Raman, R. and Viswakalyan, K. and Bashyam, M.D. and Gowrishankar, S. and Mohana Vamsy, C. and Pattnaik, S. and Rao, S. and Sastry, R.A. and Srinivasulu, M. and Chen, J. and Subba Reddy, Maddika (2013) PNUTS Functions as a Proto-Oncogene by Sequestering PTEN. Cancer Research, 73 (1). pp. 205-214. ISSN 0008-5472

Pandey, A. and Chatterjee, Subhadeep (2013) Signaling in Plant-Microbe Interactions. Plant Stress, 7 (Spl). pp. 52-59. ISSN 1749-0359

Subbaiah, E.V. and Royer, C. and Kanginakudru, S. and Satyavathi, V.V. and Babu, A.S. and Sivaprasad, V. and Chavancy, G. and DaRocha, M. and Jalabert, A. and Mauchamp, B. and Basha, I. and Couble, P. and Nagaraju, J. (2013) Engineering Silkworms for Resistance to Baculovirus Through Multigene RNA Interference. Genetics, 193 (1). pp. 63-75. ISSN 0016-6731

Jain, M.V. and Paczulla, A.M. and Klonisch, T. and Dimgba, F.N. and Rao, S.B. and Roberg, K. and Schweizer, F. and Lengerke, C. and Davoodpour, P. and Palicharla, V.R. and Subba Reddy, Maddika and Łos, M. (2013) Interconnections between apoptotic, autophagic and necrotic pathways: implications for cancer therapy development. Journal of Cellular and Molecular Medicine, 17 (1). pp. 12-29. ISSN 1582-1838

Muthuswamy, S. and Agarwal, Sarita and Dalal, Ashwin (2013) Diagnosis and Genetic Counseling for Friedreich's Ataxia: A time for consideration of TP-PCR in an Indian Setup. Hippokratia, 17 (1). pp. 38-41. ISSN 1108-4189

Banerjee, R. and Nath, S. and Ranjan, Amitabh and Khamrui, S. and Pani, B. and Sen, Ranjan and Sen, Udayaditya (2012) The First Structure of Polarity Suppression Protein, Psu from Enterobacteria Phage P4, Reveals a Novel Fold and a Knotted Dimer. Journal of Biological Chemistry, 287 (53). pp. 44667-44675. ISSN 0021-9258

Bhat, K.H. and Bhat, A. and Kumar, S. and Sharma, P. and Mukhopadhyay, Sangita (2012) Role of PPE18 Protein in Intracellular Survival and Pathogenicity of Mycobacterium tuberculosis in Mice. PLoS ONE, 7 (12). e52601. ISSN 1932-6203

Mahali, S.K. and Manna, S.K. (2012) Beta-d-glucoside protects against advanced glycation end products (AGEs)-mediated diabetic responses by suppressing ERK and inducing PPAR gamma DNA binding. Biochemical Pharmacology, 84 (12). pp. 1681-1690. ISSN 0006-2952

Ali, J. and Shashi Rekha, T. and Ranjan, Akash (2012) The parasite specific substitution matrices improve the annotation of apicomplexan proteins. BMC genomics, 13 (Suppl ). S19. ISSN 1471-2164

Muteeb, G. and Dey, D. and Mishra, S. and Sen, Ranjan (2012) A multipronged strategy of an anti-terminator protein to overcome Rho-dependent transcription termination. Nucleic Acids Research, 40 (22). pp. 11213-11228. ISSN 0305-1048

Kasbekar, D.P. (2012) The Sad paradox: mutations with dominant and recessive phenotypes. Journal of Biosciences, 37 (6). pp. 933-936. ISSN 0973-7138

Flatt, T. and Singh, Y.T. and Mazumdar-Leighton, S. and Saikia, M. and Pant, P. and Kashung, S. and Neog, K. and Chakravorty, R. and Nair, S. and Nagaraju, J. and Babu, C.R. (2012) Genetic Variation within Native Populations of Endemic Silkmoth Antheraea assamensis (Helfer) from Northeast India Indicates Need for In Situ Conservation. PLoS ONE, 7 (11). e49972. ISSN 1932-6203

Dutta, Usha and Vijaya Kumar, P. and Dalal, Ashwin (2012) Molecular Cytogenetic Characterization of a Non-Robertsonian Dicentric Chromosome 14;19 Identified in a Girl with Short Stature and Amenorrhea. Case Reports in Genetics, 2012. ID 212065. ISSN 2090-6544

Dalal, Ashwin and Bhavani, G.S. and Padma Priya, T. and Bierhals, T. and Nandineni, M.R. and Danda, S.R. and Danda, D. and Shah, H. and Vijayan, S. and Gowrishankar, K. and Phadke, S.R. and Bidchol, A.M. and Rao, A.P. and Nampoothiri, S. and Kutsche, K. and Girisha, K.M. (2012) Analysis of theWISP3gene in Indian families with progressive pseudorheumatoid dysplasia. American Journal of Medical Genetics Part A, 158A (11). pp. 2820-2828. ISSN 1552-4825

Padma Priya, T. and Dalal, Ashwin (2012) Tuberous Sclerosis: Diagnosis and Prenatal Diagnosis by MLPA. The Indian Journal of Pediatrics, 79 (10). pp. 1366-1369. ISSN 0019-5456

Bashyam, M.D. and Chaudhary, A.K. and Sinha, M. and Nagarajaram, H.A. and Radha Rama Devi, A. and Bashyam, L. and Reddy, E.C. and Dalal, Ashwin (2012) Molecular genetic analysis of MSUD from India reveals mutations causing altered protein truncation affecting the C-termini of E1α and E1β. Journal of Cellular Biochemistry, 113 (10). pp. 3122-3132. ISSN 0730-2312

Ramakrishna, Gayatri and Anwar, T. and Rajendra Kumar, A. and Chatterjee, Nirupama and Shashi Kiran, and Singh, Sapna (2012) Role of cellular senescence in hepatic wound healing and carcinogenesis. European Journal of Cell Biology, 91 (10). pp. 739-747. ISSN 0171-9335

Marbaniang, C.N. and Gowrishankar, J. (2012) Transcriptional Cross-Regulation between Gram-Negative and Gram-Positive Bacteria, Demonstrated Using ArgP-argO of Escherichia coli and LysG-lysE of Corynebacterium glutamicum. Journal of Bacteriology, 194 (20). pp. 5657-5666. ISSN 0021-9193

Ramasarma, T. (2012) Emergence of Oxyl Radicals as Selective Oxidants. Indian Journal of Biochemistry and Biophysics, 49 (5). pp. 295-305. ISSN 0301-1208

Verma, P.K. and Ranganath, P. and Dalal, Ashwin and Phadke, S.R. (2012) Spectrum of lysosomal storage disorders at a medical genetics center in Northern India. Indian Pediatrics, 49 (10). pp. 799-804. ISSN 0019-6061

Yonemura, N. and Tamura, T. and Uchino, K. and Kobayashi, I. and Tatematsu, K. and Iizuka, T. and Sezutsu, H. and Muthulakshmi, M. and Nagaraju, J. and Kusakabe, T. (2012) PhiC31 integrase-mediated cassette exchange in silkworm embryos. Molecular Genetics and Genomics, 287 (9). pp. 731-739. ISSN 1617-4615

Arunkumar, K.P. and Sahu, A.K. and Mohanty, A.R. and Awasthi, A.K. and Pradeep, A.R. and Urs, S.R. and Nagaraju, J. (2012) Genetic Diversity and Population Structure of Indian Golden Silkmoth (Antheraea assama). PLoS ONE, 7 (8). e43716. ISSN 1932-6203

Rai, M.N. and Sriram, B. and Neelima, G. and Lakshmi, D. and Kaur, Rupinder (2012) Functional Genomic Analysis of Candida glabrata-Macrophage Interaction: Role of Chromatin Remodeling in Virulence. PLoS Pathogens, 8 (8). e1002863. ISSN 1553-7374

Angalena, R. and Aggarwal, Shagun and Phadke, S.R. and Dalal, Ashwin (2012) Compound heterozygote condition in beta thalassemia major due to a novel single nucleotide deletion (-T) at codon 69 in association with IVS 1-5 (G>C) mutation. International Journal of Laboratory Hematology, 34 (4). e7-e9. ISSN 1751-5521

Singh, C.P. and Singh, J. and Nagaraju, J. (2012) A Baculovirus-Encoded MicroRNA (miRNA) Suppresses Its Host miRNA Biogenesis by Regulating the Exportin-5 Cofactor Ran. Journal of Virology, 86 (15). pp. 7867-7879. ISSN 0022-538X

Muley, V.Y. and Ranjan, Akash (2012) Effect of Reference Genome Selection on the Performance of Computational Methods for Genome-Wide Protein-Protein Interaction Prediction. PLoS ONE, 7 (7). e42057. ISSN 1932-6203

Zargar, Z.U. and Tyagi, Shweta (2012) Role of Host Cell Factor-1 in cell cycle regulation. Transcription, 3 (4). pp. 187-192. ISSN 2154-1264

Gowrishankar, J. (2012) Public funding for research projects: roles of experts and finance officials in decision-making. Current Science , 102 (11). p. 1499. ISSN 0011-3891

Patil, S.J. and Rajitha, Ponnala and Shah, S. and Dalal, Ashwin (2012) Mosaic Trisomy 9 Presenting with Congenital Heart Disease, Facial Dysmorphism and Pigmentary Skin Lesions: Intricate Issues of Genetic Counseling. The Indian Journal of Pediatrics, 79 (6). pp. 806-809. ISSN 0019-5456

Rai, Rikky and Ranjan, M. and Pradhan, B.B. and Chatterjee, Subhadeep (2012) Atypical Regulation of Virulence-Associated Functions by a Diffusible Signal Factor inXanthomonas oryzaepv.oryzae. Molecular Plant-Microbe Interactions, 25 (6). pp. 789-801. ISSN 0894-0282

Patil, S.J. and Bhat, V. and Dalal, Ashwin and Santosh, J.S. (2012) Confirmation of the Zechi-Ceide syndrome. American Journal of Medical Genetics Part A, 158A (6). pp. 1467-1471. ISSN 15524825

Dutta, Usha and Vijaya Kumar, P. and Dalal, Ashwin (2012) Molecular and cytogenetic characterization of two patients with recurrent miscarriages and X-autosome translocation. Journal of Research in Medical sciences, 17 (6). pp. 572-4. ISSN 1735-1995

Manna, S.K. (2012) Double-edged sword effect of biochanin to inhibit nuclear factor kappaB: Suppression of serine/threonine and tyrosine kinases. Biochemical Pharmacology, 83 (10). pp. 1383-1392. ISSN 0006-2952

Bhat, K.H. and Chaitanya, C.K. and Parveen, N. and Varman, R. and Ghosh, S. and Mukhopadhyay, Sangita (2012) Proline-Proline-Glutamic Acid (PPE) Protein Rv1168c of Mycobacterium tuberculosis Augments Transcription from HIV-1 Long Terminal Repeat Promoter. Journal of Biological Chemistry, 287 (20). pp. 16930-16946. ISSN 0021-9258

Xue, Bin and Kamal, M.Z. and Mohammad, T.A.S. and Krishnamoorthy, G. and Rao, N.M. (2012) Role of Active Site Rigidity in Activity: MD Simulation and Fluorescence Study on a Lipase Mutant. PLoS ONE, 7 (4). e35188. ISSN 1932-6203

Almeida, R.P.P. and Killiny, N. and Newman, K.L. and Chatterjee, Subhadeep and Ionescu, M. and Lindow, S.E. (2012) Contribution ofrpfBto Cell-to-Cell Signal Synthesis, Virulence, and Vector Transmission ofXylella fastidiosa. Molecular Plant-Microbe Interactions, 25 (4). pp. 453-462. ISSN 0894-0282

Kumar, P. and Nagarajaram, H.A. (2012) A Study on Mutational Dynamics of Simple Sequence Repeats in Relation to Mismatch Repair System in Prokaryotic Genomes. Journal of Molecular Evolution, 74 (3-4). pp. 127-139. ISSN 0022-2844

Bashyam, M.D. and Chaudhary, A.K. and Reddy, E.C. and Reddy, V. and Acharya, V. and Nagarajaram, H.A. and Radha Rama Devi, A. and Bashyam, L. and Dalal, Ashwin and Gupta, N. and Kabra, M. and Agarwal, Meenal and Phadke, S.R. and Tainwala, R. and Kumar, R. and Hariharan, S.V. (2012) A founder ectodysplasin A receptor (EDAR) mutation results in a high frequency of the autosomal recessive form of hypohidrotic ectodermal dysplasia in India. British Journal of Dermatology, 166 (4). pp. 819-829. ISSN 0007-0963

Muranjan, M. and Agarwal, Shruti and Lahiri, Keya and Bashyam, M.D. (2012) Novel Biochemical Abnormalities and Genotype in Farber Disease. Indian Pediatrics, 49 (4). pp. 320-322. ISSN 0019-6061

Rajitha, Ponnala and Ranganath, P. and Dutta, Usha and Pidugu, V.K. and Dalal, Ashwin (2012) Phenotypic and Molecular Characterization of Partial Trisomy 2q Resulting from Insertion-Duplication in Chromosome 18q: A Case Report and Review of Literature. Cytogenetic and Genome Research, 136 (3). pp. 229-234. ISSN 1424-8581

Hegde, S.R. and Rajasingh, H. and Das, C. and Mande, S.S. and Mande, S.C. (2012) Understanding Communication Signals during Mycobacterial Latency through Predicted Genome-Wide Protein Interactions and Boolean Modeling. PLoS ONE, 7 (3). e33893. ISSN 1932-6203

Dutta, Usha and Vijaya Kumar, P. and Goud, Ch.V. and Dalal, Ashwin (2012) Mosaic Down syndrome with a marker: Molecular cytogenetic characterization of the marker chromosome. Gene, 495 (2). pp. 199-204. ISSN 0378-1119

Mukhopadhyay, Sangita and Nair, S. and Ghosh, S. (2012) Pathogenesis in tuberculosis: transcriptomic approaches to unraveling virulence mechanisms and finding new drug targets. FEMS Microbiology Reviews, 36 (2). pp. 463-485. ISSN 1574-6976

Vineeth, V.S. and Malini, S.S. and Sreenivasa, G. and Dutta, Usha (2012) High incidence of sperm dysfunction in a varicocele infertile man: case report. Asian Pacific Journal of Reproduction, 1 (1). pp. 63-66. ISSN 2305-0500

Acharya, V. and Nagarajaram, H.A. (2012) Hansa: An automated method for discriminating disease and neutral human nsSNPs. Human Mutation, 33 (2). pp. 332-337. ISSN 1059-7794

Shain, A.H. and Giacomini, C.P. and Matsukuma, K. and Karikari, C.A. and Bashyam, M.D. and Hidalgo, M. and Maitra, A. and Pollack, J.R. (2012) Convergent structural alterations define SWItch/Sucrose NonFermentable (SWI/SNF) chromatin remodeler as a central tumor suppressive complex in pancreatic cancer. Proceedings of the National Academy of Sciences, 109 (5). E252-E259. ISSN 0027-8424

Kumar, Ravindra and Panigrahi, I. and Dalal, Ashwin and Agarwal, Sarita (2012) Sickle Cell Anemia—Molecular Diagnosis and Prenatal Counseling: SGPGI Experience. Indian Journal of Pediatrics, 79 (1). pp. 68-74. ISSN 0019-5456

Bashyam, M.D. and Purushotham, G. and Chaudhary, A.K. and Rao, K.M. and Acharya, V. and Mohammad, T.A.S. and Nagarajaram, H.A. and Hariram, V. and Narasimhan, C. (2012) A low prevalence of MYH7/MYBPC3 mutations among Familial Hypertrophic Cardiomyopathy patients in India. Molecular and Cellular Biochemistry, 360 (1-2). pp. 373-382. ISSN 0300-8177

Pradhan, B.B. and Ranjan, M. and Chatterjee, Subhadeep (2012) XadM, a Novel Adhesin ofXanthomonas oryzaepv.oryzae, Exhibits Similarity to Rhs Family Proteins and Is Required for Optimum Attachment, Biofilm Formation, and Virulence. Molecular Plant-Microbe Interactions, 25 (9). pp. 1157-1170. ISSN 0894-0282

Akhter, Y. and Ehebauer, M.T. and Mukhopadhyay, Sangita and Hasnain, S.E. (2012) The PE/PPE multigene family codes for virulence factors and is a possible source of mycobacterial antigenic variation: Perhaps more? Biochimie, 94 (1). pp. 110-116. ISSN 0300-9084

Shashni, R. and Mishra, S. and Kalayani, B.S. and Sen, Ranjan (2012) Suppression of in vivo Rho-dependent transcription termination defects: evidence for kinetically controlled steps. Microbiology, 158 (Pt_6). pp. 1468-1481. ISSN 1350-0872

Ranganath, P. and Pradhan, M. (2012) Complete Pentalogy of Cantrell with craniorachischisis: a case report. Journal of Prenatal Medicine, 6 (1). pp. 10-2. ISSN 1971-3290

Bashyam, M.D. and Chaudhary, A.K. and Bhat, V. (2012) The IVS-II-837 (T>G) Appears to be a Relatively Common 'Rare' β-Globin Gene Mutation in β-Thalassemia Patients in Karnataka State, South India. Hemoglobin, 36 (5). pp. 497-503. ISSN 0363-0269

Vijaya Kumar, P. and Dutta, Usha (2012) Fluorescence in .situ Hybridization: Technology and its application in Molecular Medicine. Journal of Cytology and Genetics, 13 (1-2). pp. 1-8. ISSN 0253-7605

Ramasarma, T. (2012) In praise of H2O2, the versatile ROS, and its vanadium complexes. Toxicology Mechanisms and Methods, 22 (5). pp. 336-346. ISSN 1537-6516

Anupama, K. and Krishna Leela, J. and Gowrishankar, J. (2011) Two pathways for RNase E action in Escherichia coli in vivo and bypass of its essentiality in mutants defective for Rho-dependent transcription termination. Molecular Microbiology, 82 (6). pp. 1330-1348. ISSN 0950-382X

Mrinal, N. and Tomar, A. and Nagaraju, J. (2011) Role of sequence encoded κB DNA geometry in gene regulation by Dorsal. Nucleic Acids Research, 39 (22). pp. 9574-9591. ISSN 0305-1048

Suragani, M. and Rasheedi, S. and Hasnain, S.E. and Ehtesham, N.Z. (2011) The translation initiation factor, PeIF5B, from Pisum sativum displays chaperone activity. Biochemical and Biophysical Research Communications, 414 (2). pp. 390-396. ISSN 0006-291X

Jailkhani, N. and Ravichandran, S. and Hegde, S.R. and Siddiqui, Z. and Mande, S.C. and Rao, K.V.S. (2011) Delineation of key regulatory elements identifies points of vulnerability in the mitogen-activated signaling network. Genome Research, 21 (12). pp. 2067-2081. ISSN 1088-9051

Ali, J. and Uma Devi, P. and Ranjan, Akash (2011) ApicoAlign: an alignment and sequence search tool for apicomplexan proteins. BMC Genomics, 12 (Suppl ). S6. ISSN 1471-2164

Krishnaveni, M. and Sahdev, S. and Hasnain, S.E. (2011) Baculovirus p35 gene is oppositely regulated by P53 and AP-1 like factors in Spodoptera frugiperda. Biochemical and Biophysical Research Communications, 414 (4). pp. 688-693. ISSN 0006-291X

Marbaniang, C.N. and Gowrishankar, J. (2011) Role of ArgP (IciA) in Lysine-Mediated Repression in Escherichia coli. Journal of Bacteriology, 193 (21). pp. 5985-5996. ISSN 0021-9193

Kalyani, B.S. and Muteeb, G. and Qayyum, M.Z. and Sen, Ranjan (2011) Interaction with the Nascent RNA Is a Prerequisite for the Recruitment of Rho to the Transcription Elongation Complex In Vitro. Journal of Molecular Biology, 413 (3). pp. 548-560. ISSN 0022-2836

Mahali, S.K. and Raviprakash, N. and Raghavendra, P.B. and Manna, S.K. (2011) Advanced Glycation End Products (AGEs) Induce Apoptosis via a Novel Pathway: INVOLVEMENT OF CA2+ MEDIATED BY INTERLEUKIN-8 PROTEIN. Journal of Biological Chemistry, 286 (40). pp. 34903-34913. ISSN 0021-9258

Reich, D. and Patterson, N. and Kircher, M. and Delfin, F. and Nandineni, M.R. and Pugach, I. and Ko, A.M.-S. and Ko, Y.-C. and Jinam, T.A. and Phipps, M.E. and Saitou, N. and Wollstein, A. and Kayser, M. and Pääbo, S. and Stoneking, M. (2011) Denisova Admixture and the First Modern Human Dispersals into Southeast Asia and Oceania. The American Journal of Human Genetics, 89 (4). pp. 516-528. ISSN 0002-9297

Borah, S. and Shivarathri, R. and Kaur, Rupinder (2011) The Rho1 GTPase-activating Protein CgBem2 Is Required for Survival of Azole Stress in Candida glabrata. Journal of Biological Chemistry, 286 (39). pp. 34311-34324. ISSN 0021-9258

Mukhopadhyay, Sangita and Balaji, K.N. (2011) The PE and PPE proteins of Mycobacterium tuberculosis. Tuberculosis, 91 (5). pp. 441-447. ISSN 1472-9792

Li, Yu-Rong and Zou, Hua-Song and Che, Yi-Zhou and Cui, Yi-Ping and Guo, Wei and Zou, Li-Fang and Chatterjee, Subhadeep and Biddle, E.M. and Yang, Ching-Hong and Chen, Gong-You (2011) A Novel Regulatory Role of HrpD6 in Regulatinghrp-hrc-hpaGenes inXanthomonas oryzaepv.oryzicola. Molecular Plant-Microbe Interactions, 24 (9). pp. 1086-1101. ISSN 0894-0282

Arora, A. and Chandra, N.R. and Das, A. and Gopal, B. and Mande, S.C. and Prakash, B. and Ramachandran, R. and Sankaranarayanan, R. and Sekar, K. and Suguna, K. and Tyagi, Anil K. and Vijayan, M. (2011) Structural biology of Mycobacterium tuberculosis proteins: The Indian efforts. Tuberculosis, 91 (5). pp. 456-468. ISSN 1472-9792

Sharadamma, N. and Khan, K. and Kumar, S. and Patil, K.N. and Hasnain, S.E. and Muniyappa, K. (2011) Synergy between the N-terminal and C-terminal domains of Mycobacterium tuberculosis HupB is essential for high-affinity binding, DNA supercoiling and inhibition of RecA-promoted strand exchange. FEBS Journal, 278 (18). pp. 3447-3462. ISSN 1742-464X

Khanna, Vivek and Jain, M. and Barthwal, M.K. and Kalita, D. and Boruah, J.J. and Das, S.P. and Islam, N. and Ramasarma, T. and Dikshit, M. (2011) Vasomodulatory effect of novel peroxovanadate compounds on rat aorta: Role of rho kinase and nitric oxide/cGMP pathway. Pharmacological Research, 64 (3). pp. 274-282. ISSN 1043-6618

Kwei, K.A. and Shain, A.H. and Bair, R. and Montgomery, K. and Karikari, C.A. and van de Rijn, M. and Hidalgo, M. and Maitra, A. and Bashyam, M.D. and Pollack, J.R. (2011) SMURF1 Amplification Promotes Invasiveness in Pancreatic Cancer. PLoS ONE, 6 (8). e23924. ISSN 1932-6203

Majumdar, S. and Dutta, K. and Manna, S.K. and Basu, A. and Bishayi, B. (2011) Possible Protective Role of Chloramphenicol in TSST-1 and Coagulase-Positive Staphylococcus aureus-Induced Septic Arthritis with Altered Levels of Inflammatory Mediators. Inflammation, 34 (4). pp. 269-282. ISSN 0360-3997

Mohammad, T.A.S. and Nagarajaram, H.A. (2011) SVM-based method for protein structural class prediction using secondary structural content and structural information of amino acids. Journal of Bioinformatics and Computational Biology, 9 (4). pp. 489-502. ISSN 0219-7200

Saxena, S. and Gowrishankar, J. (2011) Compromised Factor-Dependent Transcription Termination in a nusA Mutant of Escherichia coli: Spectrum of Termination Efficiencies Generated by Perturbations of Rho, NusG, NusA, and H-NS Family Proteins. Journal of Bacteriology, 193 (15). pp. 3842-3850. ISSN 0021-9193

Saxena, S. and Gowrishankar, J. (2011) Modulation of Rho-Dependent Transcription Termination in Escherichia coli by the H-NS Family of Proteins. Journal of Bacteriology, 193 (15). pp. 3832-3841. ISSN 0021-9193

Sahai, I. and Zytkowicz, T. and Rao, K.S. and Lakshmi, K.A. and Eaton, R.B. and Radha Rama Devi, A. (2011) Neonatal Screening for Inborn Errors of Metabolism Using Tandem Mass Spectrometry: Experience of the Pilot Study in Andhra Pradesh, India. The Indian Journal of Pediatrics, 78 (8). pp. 953-960. ISSN 0019-5456

Silver, M.I. and Paul, P. and Sowjanya, A.P. and Ramakrishna, Gayatri and Vedantham, H. and Kalpana, B. and Shah, K.V. and Gravitt, P.E. (2011) Shedding of Epstein-Barr Virus and Cytomegalovirus from the Genital Tract of Women in a Periurban Community in Andhra Pradesh, India. Journal of Clinical Microbiology, 49 (7). pp. 2435-2439. ISSN 0095-1137

Kumar, C.M.S. and Mande, S.C. (2011) Protein chaperones and non-protein substrates: on substrate promiscuity of GroEL. Current Science , 100 (11). pp. 1646-1653. ISSN 0011-3891

Subba Reddy, Maddika and Sridhar, K. and Rani, N. and Vivek Reddy, P. and Pokorny, J.L. and Sarkaria, J.N. and Chen, J. (2011) WWP2 is an E3 ubiquitin ligase for PTEN. Nature Cell Biology, 13 (6). pp. 728-732. ISSN 1465-7392

Swapna, G. and Chakraborty, A. and Kumari, V. and Sen, Ranjan and Nagaraja, V. (2011) Mutations in β′ subunit of Escherichia coli RNA polymerase perturb the activator polymerase functional interaction required for promoter clearance. Molecular Microbiology, 80 (5). pp. 1169-1185. ISSN 0950-382X

Naik, U. and Charitha, G. and Kanakalatha, A. and Balakrishna, N. and Niranjan, D. and Manna, S.K. (2011) A Study of Nuclear Transcription Factor-Kappa B in Childhood Autism. PLoS ONE, 6 (5). e19488. ISSN 1932-6203

Nair, S. and Pandey, A.D. and Mukhopadhyay, Sangita (2011) The PPE18 Protein of Mycobacterium tuberculosis Inhibits NF- B/rel-Mediated Proinflammatory Cytokine Production by Upregulating and Phosphorylating Suppressor of Cytokine Signaling 3 Protein. The Journal of Immunology, 186 (9). pp. 5413-5424. ISSN 0022-1767

Singh, N.P. and Madabhushi, S.R. and Srivastava, S. and Senthilkumar, R. and Neeraja, C. and Khosla, Sanjeev and Mishra, R.K. (2011) Epigenetic profile of the euchromatic region of human Y chromosome. Nucleic Acids Research, 39 (9). pp. 3594-3606. ISSN 0305-1048

Rajitha, Ponnala and Dalal, Ashwin (2011) Partial monosomy 7q. Indian Pediatrics, 48 (5). pp. 399-401. ISSN 0974-7559

Chatterjee, Nirupama and Shashi Kiran, and Ram, B.M. and Islam, N. and Ramasarma, T. and Ramakrishna, Gayatri (2011) Diperoxovanadate can substitute for H2O2 at much lower concentration in inducing features of premature cellular senescence in mouse fibroblasts (NIH3T3). Mechanisms of Ageing and Development, 132 (5). pp. 230-239. ISSN 0047-6374

Vanitha, N. (2011) Positron Emission Tomography (PET) in Neuroscience research. Annals of Neurosciences, 18 (2). p. 36. ISSN 0972-7531

Gunnarsdóttir, E.D. and Nandineni, M.R. and Li, M. and Myles, S. and Gil, D. and Pakendorf, B. and Stoneking, M. (2011) Larger mitochondrial DNA than Y-chromosome differences between matrilocal and patrilocal groups from Sumatra. Nature Communications, 2. p. 228. ISSN 2041-1723

Das, Arghya and Mukhopadhyay, Sangita (2011) The Evil Axis of Obesity, Inflammation and Type-2 Diabetes. Endocrine, Metabolic & Immune Disorders - Drug Targets, 11 (1). pp. 23-31. ISSN 1871-5303

Kole, L. and Giri, B. and Manna, S.K. and Pal, Biswajit and Ghosh, S. (2011) Biochanin-A, an isoflavon, showed anti-proliferative and anti-inflammatory activities through the inhibition of iNOS expression, p38-MAPK and ATF-2 phosphorylation and blocking NFκB nuclear translocation. European Journal of Pharmacology, 653 (1-3). pp. 8-15. ISSN 0014-2999

Yadav, A.K. and Desai, P.R. and Rai, M.N. and Kaur, Rupinder and Ganesan, K. and Bachhawat, A.K. (2011) Glutathione biosynthesis in the yeast pathogens Candida glabrata and Candida albicans: essential in C. glabrata, and essential for virulence in C. albicans. Microbiology, 157 (2). pp. 484-495. ISSN 1350-0872

Bairwa, G. and Kaur, Rupinder (2011) A novel role for a glycosylphosphatidylinositol-anchored aspartyl protease, CgYps1, in the regulation of pH homeostasis in Candida glabrata. Molecular Microbiology, 79 (4). pp. 900-913. ISSN 0950-382X

Dutta, Usha and Rajitha, Ponnala and Vijaya Kumar, P. and Dalal, Ashwin (2011) Cytogenetic abnormalities in 1162 couples with recurrent miscarriages in Southern region of India: report and review. Journal of Assisted Reproduction and Genetics, 28 (2). pp. 145-149. ISSN 1058-0468

Chalissery, J. and Muteeb, G. and Kalarickal, N.C. and Shalini, M. and Jisha, V. and Sen, Ranjan (2011) Interaction Surface of the Transcription Terminator Rho Required to Form a Complex with the C-Terminal Domain of the Antiterminator NusG. Journal of Molecular Biology, 405 (1). pp. 49-64. ISSN 0022-2836

Bose, S. and Sakhuja, P. and Lavanaya, B. and Agarwal, A.K. and Kazim, S.N. and Khan, L.A. and Sarin, S.K. and Ramakrishna, Gayatri (2011) Hepatocellular carcinoma with persistent hepatitis B virus infection shows unusual downregulation of Ras expression and differential response to Ras mediated signaling. Journal of Gastroenterology and Hepatology, 26 (1). pp. 135-144. ISSN 0815-9319

Shukla, J.N. and Jadhav, S. and Nagaraju, J. (2011) Novel female-specific splice form of dsx in the silkworm, Bombyx mori. Genetica, 139 (1). pp. 23-31. ISSN 0016-6707

Thiagarajan, D. and Rachana, R.D. and Khosla, Sanjeev (2011) The DNA methyltranferase Dnmt2 participates in RNA processing during cellular stress. Epigenetics, 6 (1). pp. 103-113. ISSN 1559-2294

Kumar, P. and Chaitanya, P.S. and Nagarajaram, H.A. (2011) PSSRdb: a relational database of polymorphic simple sequence repeats extracted from prokaryotic genomes. Nucleic Acids Research, 39 (Databa). D601-D605. ISSN 0305-1048

Arunkumar, K.P. and Nagaraju, J. (2011) Drosophila intersex orthologue in the silkworm, Bombyx mori and related species. Genetica, 139 (1). pp. 141-147. ISSN 0016-6707

Bentur, J.S. and Sinha, D.K. and Padmavathy, Ch. and Revathy, C. and Muthulakshmi, M. and Nagaraju, J. (2011) Isolation and Characterization of Microsatellite Loci in the Asian Rice Gall Midge (Orseolia oryzae) (Diptera: Cecidomyiidae). International Journal of Molecular Sciences, 12 (12). pp. 755-772. ISSN 1422-0067

Mohammad, T.A.S. and Nagarajaram, H.A. (2011) A hierarchical approach to protein fold prediction. Journal of Integrative Bioinformatics, 8 (1). p. 185. ISSN 1613-4516

Malini, S.S. and Vijaya Kumar, P. and Dalal, Ashwin and Dutta, Usha (2011) Evaluation of sex chromosomal anomalies in sperms among infertile males by Fluorescence in situ Hybridization. Journal of Cytology and Genetics, 12. pp. 77-84. ISSN 0253-7605

Radha Rama Devi, A. and Dutta, Usha (2011) Ring Chromosome 20 Associated with Refractory Epilepsy: A Case Report. Asian Journal of Medical Sciences, 2 (3). pp. 141-144. ISSN 2091-0576

Singh, J. and Singh, C.P. and Bhavani, A. and Nagaraju, J. (2010) Discovering microRNAs from Bombyx mori nucleopolyhedrosis virus. Virology, 407 (1). pp. 120-128. ISSN 0973-7138

Mudunuri, S.B. and Kumar, P. and Appa Rao, A. and Pallamsetty, S. and Nagarajaram, H.A. (2010) G-IMEx: A comprehensive software tool for detection of microsatellites from genome sequences. Bioinformation, 5 (5). pp. 221-3. ISSN 0973-2063

Gravitt, P.E. and Paul, P. and Katki, H.A. and Vendantham, H. and Ramakrishna, Gayatri and Sudula, M. and Kalpana, B. and Ronnett, B.M. and Vijayaraghavan, K. and Shah, K.V. (2010) Effectiveness of VIA, Pap, and HPV DNA Testing in a Cervical Cancer Screening Program in a Peri-Urban Community in Andhra Pradesh, India. PLoS ONE, 5 (10). e13711. ISSN 1932-6203

Angalena, R. and Prabitha, K.N. and Chaudhary, A.K. and Bashyam, M.D. and Jain, S. and Dalal, Ashwin (2010) A novel homozygous point mutation at codon 82 (HBB:c.247A > T) in the beta-globin gene leads to thalassemia major. International Journal of Laboratory Hematology, 32 (5). pp. 548-549. ISSN 1751-5521

Radha, B. and Ramasarma, T. (2010) Reinstate hydrogen peroxide as the product of alternative oxidase of plant mitochondria. Indian Journal of Biochemistry and Biophysics, 47 (5). pp. 306-310. ISSN 0301-1208

Kumar, S. and Sardesai, A.A. and Basu, D. and Muniyappa, K. and Hasnain, S.E. (2010) DNA Clasping by Mycobacterial HU: The C-Terminal Region of HupB Mediates Increased Specificity of DNA Binding. PLoS ONE, 5 (9). e12551. ISSN 1932-6203

Shukla, J.N. and Nagaraju, J. (2010) Doublesex: a conserved downstream gene controlled by diverse upstream regulators. Journal of Genetics, 89 (3). pp. 341-356. ISSN 0973-7731

Nagaraju, J. and Saccone, G. (2010) How is sex determined in insects? [Preface]. Journal of Genetics, 89 (3). pp. 269-270. ISSN 0973-7731

Nagaraju, J. and Saccone, G. (2010) How is sex determined in insects? An epilogue. Journal of Genetics, 89 (3). pp. 389-390. ISSN 0973-7731

Chatterjee, Subhadeep (2010) Fatal attraction: bacteria exploit fungal heterokaryon incompatibility to obtain nutrients. Journal of Biosciences, 35 (3). pp. 329-330. ISSN 0973-7138

Nirmala, Y. and Bashyam, M.D. (2010) Hormonal regulation of gluconeogenic gene transcription in the liver. Journal of Biosciences, 35 (3). pp. 473-484. ISSN 0973-7138

Shukla, J.N. and Nagaraju, J. (2010) Two female-specific DSX proteins are encoded by the sex-specific transcripts of dsx, and are required for female sexual differentiation in two wild silkmoth species, Antheraea assama and Antheraea mylitta (Lepidoptera, Saturniidae). Insect Biochemistry and Molecular Biology, 40 (9). pp. 672-682. ISSN 0965-1748

Nandineni, M.R. and Prasad, S.P.R. and Goud, Ch.V. and Negi, D.S. and Nagaraju, J. and Gowrishankar, J. (2010) DNA - based identification of victims of the Mangalore air crash of May 2010. Current Science, 99 (3). pp. 341-342. ISSN 0011-3891

Dalal, Ashwin and Sarkar, A. and Padma Priya, T. and Nandineni, M.R. (2010) Giuffrè-Tsukahara syndrome: Evidence for X-linked dominant inheritance and review. American Journal of Medical Genetics Part A, 152A (8). pp. 2057-2060. ISSN 1552-4825

Manderwad, G.P. and Gokul, G. and Kannabiran, C. and Honavar, S.G. and Khosla, Sanjeev and Vemuganti, G.K. (2010) Hypomethylation of the DNMT3L promoter in ocular surface squamous neoplasia. Archives of Pathology & Laboratory Medicine, 134 (8). pp. 1193-6. ISSN 1543-2165

Sabareesh, V. and Sarkar, P. and Sardesai, A.A. and Chatterji, D. (2010) Identifying N60D mutation in ω subunit of Escherichia coli RNA polymerase by bottom-up proteomic approach. The Analyst, 135 (10). pp. 2723-2729. ISSN 0003-2654

Mrinal, N. and Nagaraju, J. (2010) Dynamic Repositioning of Dorsal to Two Different B Motifs Controls Its Autoregulation during Immune Response in Drosophila. Journal of Biological Chemistry, 285 (31). pp. 24206-24216. ISSN 0021-9258

Manna, S.K. and Bose, J.S. and Gangan, V. and Raviprakash, N. and Navaneetha, T. and Raghavendra, P.B. and Babajan, B. and Kumar, C.S. and Jain, S.K. (2010) Novel Derivative of Benzofuran Induces Cell Death Mostly by G2/M Cell Cycle Arrest through p53-dependent Pathway but Partially by Inhibition of NF-kappaB. Journal of Biological Chemistry, 285 (29). pp. 22318-22327. ISSN 0021-9258

Girisha, K.M. and Vahab, S.A. and Dalal, Ashwin and Gopinath, P.M. and Satyamoorthy, K. (2010) Compound heterozygosity for HbD Punjab and polyadenylation signal mutation causes clinically asymptomatic mild hypochromia and microcytosis. Annals of Hematology, 89 (6). pp. 625-626. ISSN 0939-5555

Agarwal, Sarita and Tamhankar, P.M. and Kumar, R. and Dalal, Ashwin (2010) Clinical and haematological features in a compound heterozygote (HBB:c.92 + 5G > C/HBB:c.93-2A > C) case of thalassaemia major. International Journal of Laboratory Hematology, 32 (3). pp. 369-372. ISSN 1751-5521

Bashir, N. and Kounsar, F. and Mukhopadhyay, Sangita and Hasnain, S.E. (2010) Mycobacterium tuberculosisconserved hypothetical protein rRv2626c modulates macrophage effector functions. Immunology, 130 (1). pp. 34-45. ISSN 0019-2805

Bashyam, M.D. and Chaudhary, A.K. and Reddy, E.C. and Radha Rama Devi, A. and Savithri, G.R. and Ratheesh, R. and Bashyam, L. and Mahesh, E. and Sen, D. and Puri, R.D. and Verma, I.C. and Nampoothiri, S. and Vaidyanathan, S. and Chandrashekar, M.D. and Prameela, K. (2010) Phenylalanine hydroxylase gene mutations in phenylketonuria patients from India: Identification of novel mutations that affect PAH RNA. Molecular Genetics and Metabolism, 100 (1). pp. 96-99. ISSN 1096-7192

Priya, T.P. and Philip, N. and Molho-Pessach, V. and Busa, T. and Dalal, Ashwin and Zlotogorski, A. (2010) H syndrome: novel and recurrent mutations inSLC29A3. British Journal of Dermatology, 162 (5). pp. 1132-1134. ISSN 0007-0963

Vedantham, H. and Silver, M.I. and Kalpana, B. and Rekha, C. and Karuna, B.P. and Vidyadhari, K. and Mrudula, S. and Ronnett, B.M. and Vijayaraghavan, K. and Ramakrishna, Gayatri and Sowjanya, A.P. and Laxmi, S. and Shah, K.V. and Gravitt, P.E. (2010) Determinants of VIA (Visual Inspection of the Cervix After Acetic Acid Application) Positivity in Cervical Cancer Screening of Women in a Peri-Urban Area in Andhra Pradesh, India. Cancer Epidemiology Biomarkers & Prevention, 19 (5). pp. 1373-1380. ISSN 1055-9965

Manna, S.K. and Babajan, B. and Raghavendra, P.B. and Raviprakash, N. and Suresh Kumar, C. (2010) Inhibiting TRAF2-mediated Activation of NF- B Facilitates Induction of AP-1. Journal of Biological Chemistry, 285 (15). pp. 11617-11627. ISSN 0021-9258

Werner, J.K. and Speed, T. and Bhandari, Rashna (2010) Protein Pyrophosphorylation by Diphosphoinositol Pentakisphosphate (InsP 7). Methods in Molecular Biology, 645. pp. 87-102. ISSN 1064-3745

Alam, K. and Ghousunnissa, S. and Nair, S. and Valluri, V.L. and Mukhopadhyay, Sangita (2010) Glutathione-Redox Balance Regulates c-rel-Driven IL-12 Production in Macrophages: Possible Implications in Antituberculosis Immunotherapy. The Journal of Immunology, 184 (6). pp. 2918-2929. ISSN 0022-1767

Muteeb, G. and Sen, Ranjan (2010) Random Mutagenesis Using a Mutator Strain. Methods in Molecular Biology, 634. pp. 411-419. ISSN 1064-3745

Gowrishankar, J. (2010) Extramural research funding by institutions that undertake intramural research. Current Science, 98 (4). p. 478. ISSN 0011-3891

Kalarickal, N.C. and Ranjan, Amitabh and Kalyani, B.S. and Wal, Megha and Sen, Ranjan (2010) A Bacterial Transcription Terminator with Inefficient Molecular Motor Action but with a Robust Transcription Termination Function. Journal of Molecular Biology, 395 (5). pp. 966-982. ISSN 0022-2836

Khamrui, S. and Ranjan, Amitabh and Pani, B. and Sen, Ranjan and Sen, Udayaditya (2010) Crystallization and preliminary X-ray analysis of Psu, an inhibitor of the bacterial transcription terminator Rho. Acta Crystallographica Section F Structural Biology and Crystallization Communications, 66 (2). pp. 204-206. ISSN 1744-3091

Naushad, S.M. and Radha Rama Devi, A. (2010) Role of parental folate pathway single nucleotide polymorphisms in altering the susceptibility to neural tube defects in South India. Journal of Perinatal Medicine, 38 (1). pp. 63-69. ISSN 0300-5577

Kumar, P. and Joshi, D.C. and Akif, M. and Akhter, Y. and Hasnain, S.E. and Mande, S.C. (2010) Mapping Conformational Transitions in Cyclic AMP Receptor Protein: Crystal Structure and Normal-Mode Analysis of Mycobacterium tuberculosis apo-cAMP Receptor Protein. Biophysical Journal, 98 (2). pp. 305-314. ISSN 0006-3495

Purushotham, G. and Madhumohan, K. and Anwaruddin, M. and Nagarajaram, H.A. and Hariram, V. and Narasimhan, C. and Bashyam, M.D. (2010) The MYH7 p.R787H mutation causes hypertrophic cardiomyopathy in two unrelated families. Experimental and clinical cardiology, 15 (1). e1-4. ISSN 1918-1515

Mudunuri, S.B. and Appa Rao, A. and Pallamsetty, S. and Mishra, P. and Nagarajaram, H.A. (2009) VMD: Viral Microsatellite Database-A Comprehensive Resource for all Viral Microsatellites. Journal of Computer Science & Systems Biology, 02 (06). pp. 283-286. ISSN 0974-7230

Manimaran, P. and Hegde, S.R. and Mande, S.C. (2009) Prediction of conditional gene essentiality through graph theoretical analysis of genome-wide functional linkages. Molecular BioSystems, 5 (12). pp. 1936-1942. ISSN 1742-206X

Nair, S. and Ramaswamy, P.A. and Ghosh, S. and Joshi, D.C. and Pathak, N. and Siddiqui, I. and Sharma, P. and Hasnain, S.E. and Mande, S.C. and Mukhopadhyay, Sangita (2009) The PPE18 of Mycobacterium tuberculosis Interacts with TLR2 and Activates IL-10 Induction in Macrophage. The Journal of Immunology, 183 (10). pp. 6269-6281. ISSN 0022-1767

Trivedi, S. and Ramakrishna, Gayatri (2009) miRNA and Neurons. International Journal of Neuroscience, 119 (11). pp. 1995-2016. ISSN 0020-7454

Kumar, C.M.S. and Khare, G. and Srikanth, C.V. and Tyagi, Anil K. and Sardesai, A.A. and Mande, S.C. (2009) Facilitated Oligomerization of Mycobacterial GroEL: Evidence for Phosphorylation-Mediated Oligomerization. Journal of Bacteriology, 191 (21). pp. 6525-6538. ISSN 0021-9193

Shimomura, M. and Minami, H. and Suetsugu, Y. and Ohyanagi, H. and Satoh, C. and Antonio, B. and Nagamura, Y. and Kadono-Okuda, K. and Kajiwara, H. and Sezutsu, H. and Nagaraju, J. and Goldsmith, M.R. and Xia, Q. and Yamamoto, K. and Mita, K. (2009) KAIKObase: An integrated silkworm genome database and data mining tool. BMC Genomics, 10 (1). p. 486. ISSN 1471-2164

Korupolu, R.V. and Achary, M.S. and Aneesa, F. and Sathish, K. and Wasia, R. and Sairam, M. and Nagarajaram, H.A. and Singh, S.S. (2009) Profilin oligomerization and its effect on poly (l-proline) binding and phosphorylation. International Journal of Biological Macromolecules, 45 (3). pp. 265-273. ISSN 0141-8130

Gita Kumari, and Mahalingam, S. (2009) Extracellular signal-regulated kinase 2 (ERK-2) mediated phosphorylation regulates nucleo-cytoplasmic shuttling and cell growth control of Ras-associated tumor suppressor protein, RASSF2. Experimental Cell Research, 315 (16). pp. 2775-2790. ISSN 0014-4827

Raghavendra, P.B. and Pathak, Niteen and Manna, S.K. (2009) Novel role of thiadiazolidine derivatives in inducing cell death through Myc-Max, Akt, FKHR, and FasL pathway. Biochemical Pharmacology, 78 (5). pp. 495-503. ISSN 0006-2952

Naushad, S.M. and Jain, J.M.N. and Krishnaprasad, C. and Singh, R.P. and Naik, U. and Radha Rama Devi, A. (2009) Aberrations in folate metabolic pathway and altered susceptibility to autism. Psychiatric Genetics, 19 (4). pp. 171-176. ISSN 0955-8829

Basu, D. and Khare, G. and Singh, S. and Tyagi, Anil K. and Khosla, Sanjeev and Mande, S.C. (2009) A novel nucleoid-associated protein of Mycobacterium tuberculosis is a sequence homolog of GroEL. Nucleic Acids Research, 37 (15). pp. 4944-4954. ISSN 0305-1048

Gokul, G. and Ramakrishna, Gayatri and Khosla, Sanjeev (2009) Reprogramming of HeLa cells uponDNMT3Loverexpression mimics carcinogenesis. Epigenetics, 4 (5). pp. 322-329. ISSN 1559-2294

Govindaiah, V. and Naushad, S.M. and Jain, J.M.N. and Krishnaprasad , C. and Radha Rama Devi , A. (2009) Genetic and environmental influences on total plasma homocysteine and coronary artery disease (CAD) risk among South Indians. Clinica Chimica Acta, 405 (1-2). pp. 127-131. ISSN 0009-8981

Rasheedi, S. and Suragani, M. and Haq, S.K. and Ghosh, S. and Ehtesham, N.Z. and Hasnain, S.E. (2009) Biophysical characterization and unfolding of LEF4 factor of RNA polymerase fromAcNPV. Biopolymers, 91 (7). pp. 574-582. ISSN 0006-3525

Bua, A. and Rosu, V. and Molicotti, P. and Das Gupta, S.K. and Ahmed, N. and Zanetti, S. and Sechi, L.A. (2009) Phages specific for mycobacterial lipoarabinomannan help serodiagnosis of tuberculosis. New Microbiologica, 32 (3). pp. 293-296. ISSN 1121-7138

Pani, B. and Ranjan, Amitabh and Sen, Ranjan (2009) Interaction Surface of Bacteriophage P4 Protein Psu Required for Complex Formation with the Transcription Terminator Rho. Journal of Molecular Biology, 389 (4). pp. 647-660. ISSN 0022-2836

Bhate, R.H. and Ramasarma, T. (2009) Evidence for H2O2 as the product of reduction of oxygen by alternative oxidase in mitochondria from potato tubers. Archives of Biochemistry and Biophysics, 486 (2). pp. 165-169. ISSN 0003-9861

Johny, S. and Chakraborty, S. and Gadagkar, R. and Nagaraju, J. (2009) Polymorphic microsatellite loci for primitively eusocial waspRopalidia marginata. Molecular Ecology Resources, 9 (4). pp. 1172-1175. ISSN 1755-098X

Arunkumar, K.P. and Mita, K. and Nagaraju, J. (2009) The Silkworm Z Chromosome Is Enriched in Testis-Specific Genes. Genetics, 182 (2). pp. 493-501. ISSN 0016-6731

Bashyam, M.D. (2009) Nonsense-mediated decay: linking a basic cellular process to human disease. Expert Review of Molecular Diagnostics, 9 (4). pp. 299-303. ISSN 1744-8352

Sowjanya, A.P. and Paul, P. and Vedantham, H. and Ramakrishna, Gayatri and Vidyadhari, D. and Vijayaraghavan, K. and Shantha Laksmi, and Mrudula, S. and Ronnett, B.M. and Das, Manik and Shah, K.V. and Gravitt, P.E. (2009) Suitability of self-collected vaginal samples for cervical cancer screening in periurban villages in Andhra Pradesh, India. Cancer Epidemiology, Biomarkers & Prevention, 18 (5). pp. 1373-8. ISSN 1055-9965

Kaur, Rupinder (2009) Lilavati's Daughters: The Women Scientists of India by Rohini Godbole and Ram Ramaswamy (eds). Current Science, 96 (8). pp. 1137-1138. ISSN 0011-3891

Manna, S.K. and Gangadharan, C. (2009) Decrease in RelA phosphorylation by inhibiting protein kinase A induces cell death in NF-κB-expressing and drug-resistant tumor cells. Molecular Immunology, 46 (7). pp. 1340-1350. ISSN 0161-5890

Achary, M.S. and Nagarajaram, H.A. (2009) Effects of Disease Causing Mutations on the Essential Motions in Proteins. Journal of Biomolecular Structure and Dynamics, 26 (5). pp. 609-623. ISSN 0739-1102

Dalal, Ashwin and Mehrotra, R.N. (2009) Hypertrichosis, hyperkeratosis and mental retardation syndrome: further delineation of phenotype. Clinical Dysmorphology, 18 (2). pp. 83-84. ISSN 0962-8827

Bose, J.S. and Gangan, V. and Jain, S.K. and Manna, S.K. (2009) Novel caffeic acid ester derivative induces apoptosis by expressing fasl and downregulating NF-KappaB: Potentiation of cell death mediated by chemotherapeutic agents. Journal of Cellular Physiology, 218 (3). pp. 653-662. ISSN 0021-9541

Govindaiah, V. and Naushad, S.M. and Prabhakara, K. and Krishnaprasad, C. and Radha Rama Devi, A. (2009) Association of parental hyperhomocysteinemia and C677T Methylene tetrahydrofolate reductase (MTHFR) polymorphism with recurrent pregnancy loss. Clinical Biochemistry, 42 (4-5). pp. 380-386. ISSN 0009-9120

Kumar, M.S. and Ramachandran, A. and Hasnain, S.E. and Bashyam, M.D. (2009) Octamer and heat shock elements regulate transcription from the AcMNPV polyhedrin gene promoter. Archives of Virology, 154 (3). pp. 445-456. ISSN 0304-8608

Kumar, S. and Farhana, A. and Hasnain, S.E. (2009) In-Vitro Helix Opening of M. tuberculosis oriC by DnaA Occurs at Precise Location and Is Inhibited by IciA Like Protein. PLoS ONE, 4 (1). e4139. ISSN 1932-6203

Arunkumar, K.P. and Kifayathullah, L. and Nagaraju, J. (2009) Microsatellite markers for the Indian golden silkmoth,Antheraea assama(Saturniidae: Lepidoptera). Molecular Ecology Resources, 9 (1). pp. 268-270. ISSN 1755-098X

Kumar, S. and Balakrishna, K. and Agarwal, G.S. and Merwyn, S. and Rai, G.P. and Batra, H. V. and Sardesai, A.A. and Gowrishankar, J. (2009) Th1-type immune response to infection by pYV-cured phoP-phoQ null mutant of Yersinia pseudotuberculosis is defective in mouse model. Antonie van Leeuwenhoek, 95 (1). pp. 91-100. ISSN 0003-6072

Bose, J.S. and Gangan, V. and Jain, S.K. and Manna, S.K. (2009) Downregulation of Inflammatory Responses by Novel Caffeic Acid Ester Derivative by Inhibiting NF-kappa B. Journal of Clinical Immunology, 29 (1). pp. 90-98. ISSN 0271-9142

Bashyam, M.D. (2009) Studies on nonsense mediated decay reveal novel therapeutic options for genetic diseases. Recent Patents on DNA & Gene Sequences, 3 (1). pp. 7-15. ISSN 2212-3431

Ahmed, N. and Ehtesham, N.Z. and Hasnain, S.E. (2009) Ancestral Mycobacterium tuberculosis genotypes in India: Implications for TB control programmes. Infection, Genetics and Evolution, 9 (1). pp. 142-146. ISSN 1567-1348

Paila, U. and Kondam, R. and Ranjan, Akash (2008) Genome bias influences amino acid choices: analysis of amino acid substitution and re-compilation of substitution matrices exclusive to an AT-biased genome. Nucleic Acids Research, 36 (21). pp. 6664-6675. ISSN 0305-1048

Achary, M.S. and Nagarajaram, H.A. (2008) Comparative docking studies of CYP1b1 and its PCG-associated mutant forms. Journal of Biosciences, 33 (5). pp. 699-713. ISSN 0250-5991

Sridhar, V. and Devi, S.M. and Ahmed, N. and Sritharan, M. (2008) Diagnostic potential of an iron-regulated hemin-binding protein HbpA that is widely conserved in Leptospira interrogans. Infection, Genetics and Evolution, 8 (6). pp. 772-776. ISSN 15671348

Hegde, S.R. and Manimaran, P. and Mande, S.C. (2008) Dynamic Changes in Protein Functional Linkage Networks Revealed by Integration with Gene Expression Data. PLoS Computational Biology, 4 (11). e1000237. ISSN 1553-7358

Aruna, B. and Islam, A. and Ghosh, S. and Singh, A.K. and Vijayalakshmi, M. and Ahmad, F. and Ehtesham, N.Z. (2008) Biophysical Analyses of Human Resistin: Oligomer Formation Suggests Novel Biological Function. Biochemistry, 47 (47). pp. 12457-12466. ISSN 0006-2960

Kumar, K.P. and Issac, B. and Dodson, E.J. and Turkenburg, J.P. and Mande, S.C. (2008) Crystal Structure of Mycobacterium tuberculosis YefM Antitoxin Reveals that it is Not an Intrinsically Unstructured Protein. Journal of Molecular Biology, 383 (3). pp. 482-493. ISSN 0022-2836

Sowpati, D.T. and Thiagarajan, D. and Sharma, S.C. and Sultana, H. and John, R. and Surani, A. and Mishra, R.K. and Khosla, Sanjeev (2008) An intronic DNA sequence within the mouse Neuronatin gene exhibits biochemical characteristics of an ICR and acts as a transcriptional activator in Drosophila. Mechanisms of Development, 125 (11-12). pp. 963-973. ISSN 0925-4773

Akif, M. and Khare, G. and Tyagi, Anil K. and Mande, S.C. and Sardesai, A.A. (2008) Functional Studies of Multiple Thioredoxins from Mycobacterium tuberculosis. Journal of Bacteriology, 190 (21). pp. 7087-7095. ISSN 0021-9193

Tundup, S. and Pathak, Niteen and Ramanadham, M. and Mukhopadhyay, Sangita and Murthy, K.J.R. and Ehtesham, N.Z. and Hasnain, S.E. (2008) The Co-Operonic PE25/PPE41 Protein Complex of Mycobacterium tuberculosis Elicits Increased Humoral and Cell Mediated Immune Response. PLoS ONE, 3 (10). e3586. ISSN 1932-6203

Mrinal, N. and Nagaraju, J. (2008) Intron Loss Is Associated with Gain of Function in the Evolution of the Gloverin Family of Antibacterial Genes in Bombyx mori. Journal of Biological Chemistry, 283 (34). pp. 23376-23387. ISSN 0021-9258

Singh, J. and Nagaraju, J. (2008) In silicoprediction and characterization of microRNAs from red flour beetle (Tribolium castaneum). Insect Molecular Biology, 17 (4). pp. 427-436. ISSN 0962-1075

Khan, N. and Alam, K. and Mande, S.C. and Valluri, V.L. and Hasnain, S.E. and Mukhopadhyay, Sangita (2008) Mycobacterium tuberculosisheat shock protein 60 modulates immune response to PPD by manipulating the surface expression of TLR2 on macrophages. Cellular Microbiology, 10 (8). pp. 1711-1722. ISSN 1462-5814

Dutta, D. and Chalissery, J. and Sen, Ranjan (2008) Transcription Termination Factor Rho Prefers Catalytically Active Elongation Complexes for Releasing RNA. Journal of Biological Chemistry, 283 (29). pp. 20243-20251. ISSN 0021-9258

Arunkumar, K.P. and Tomar, A. and Daimon, T. and Shimada, T. and Nagaraju, J. (2008) WildSilkbase: An EST database of wild silkmoths. BMC Genomics, 9 (1). p. 338. ISSN 1471-2164

Hall, N. and Ahmed, A. and Victoria, B. and Zuerner, R.L. and Ahmed, N. and Bulach, D.M. and Quinteiro, J. and Hartskeerl, R.A. (2008) Conservation of the S10-spc-α Locus within Otherwise Highly Plastic Genomes Provides Phylogenetic Insight into the Genus Leptospira. PLoS ONE, 3 (7). e2752. ISSN 1932-6203

Sriramana, K. and Muralidhar, M. and Jakati, R.D. and Nagaraju, J. (2008) Genetic evidence from Indian red jungle fowl corroborates multiple domestication of modern day chicken. BMC Evolutionary Biology, 8 (1). p. 174. ISSN 1471-2148

Khan, N. and Alam, K. and Nair, S. and Valluri, V.L. and Murthy, K.J.R. and Mukhopadhyay, Sangita (2008) Association of Strong Immune Responses to PPE Protein Rv1168c with Active Tuberculosis. Clinical and Vaccine Immunology, 15 (6). pp. 974-980. ISSN 1556-6811

Davis, D. and Farhana, A. and Kumar, S. and Rathore, S.S. and Ghosh, P.C. and Ehtesham, N.Z. and Tyagi, Anil K. and Hasnain, S.E. (2008) Mechanistic Insights into a Novel Exporter-Importer System of Mycobacterium tuberculosis Unravel Its Role in Trafficking of Iron. PLoS One, 3 (5). e2087. ISSN 1932-6203

Rajesh, V. and Singamsetti, V.K. and Vidya, S. and Gowrishankar, M. and Elamaran, M. and Tripathi, J. and Radhika, N.B. and Kochar, D. and Ranjan, Akash and Roy, S.K. and Das, A. (2008) Plasmodium falciparum: Genetic polymorphism in apical membrane antigen-1 gene from Indian isolates. Experimental Parasitology, 119 (1). pp. 144-151. ISSN 0014-4894

Frankel, W.N. and Bashyam, M.D. and Kwei, K.A. and Kao, J. and Ratheesh, R. and Reddy, E.C. and Kim, Y.H. and Montgomery, K. and Giacomini, C.P. and Choi, Y.-L. and Chatterjee, Sreejata and Karikari, C.A. and Salari, K. and Wang, P. and Hernandez-Boussard, T. and Gowrishankar, S. and van de Rijn, M. and Maitra, A. and Pollack, J.R. (2008) Genomic Profiling Identifies GATA6 as a Candidate Oncogene Amplified in Pancreatobiliary Cancer. PLoS Genetics, 4 (5). e1000081. ISSN 1553-7404

Prabhakara, K. and Bruno, D.L. and Padman, P. and Prasad, Suma and Sudheer Kumar, R. and Slater, H. R. and Radha Rama Devi, A. (2008) Prenatal detection of deletion–duplication of chromosome 3 arising from meiotic recombination of a familial pericentric inversion. Prenatal Diagnosis, 28 (5). pp. 466-468. ISSN 0197-3851

Ahmed, N. and Dobrindt, U. and Hacker, J. and Hasnain, S.E. (2008) Genomic fluidity and pathogenic bacteria: applications in diagnostics, epidemiology and intervention. Nature Reviews Microbiology, 6 (5). pp. 387-394. ISSN 1740-1526

Vindal, V. and Ashwantha Kumar, E. and Ranjan, Akash (2008) Identification of operator sites within the upstream region of the putative mce2R gene from mycobacteria. FEBS Letters, 582 (7). pp. 1117-1122. ISSN 0014-5793

Bannantine, J.P. and Rosu, V. and Zanetti, S. and Rocca, S. and Ahmed, N. and Sechi, L.A. (2008) Antigenic profiles of recombinant proteins from Mycobacterium avium subsp. paratuberculosis in sheep with Johne's disease. Veterinary Immunology and Immunopathology, 122 (1-2). pp. 116-125. ISSN 0165-2427

Goyal, K. and Mande, S.C. (2008) Exploiting 3D structural templates for detection of metal-binding sites in protein structures. Proteins: Structure, Function, and Bioinformatics, 70 (4). pp. 1206-1218. ISSN 0887-3585

Rizwan, M. and Alvi, A. and Ahmed, N. (2008) Novel Protein Antigen (JHP940) from the Genomic Plasticity Region of Helicobacter pylori Induces Tumor Necrosis Factor Alpha and Interleukin-8 Secretion by Human Macrophages. Journal of Bacteriology, 190 (3). pp. 1146-1151. ISSN 0021-9193

Sechi, L.A. and Rosu, V. and Pacifico, A. and Fadda, G. and Ahmed, N. and Zanetti, S. (2008) Humoral Immune Responses of Type 1 Diabetes Patients to Mycobacterium avium subsp. paratuberculosis Lend Support to the Infectious Trigger Hypothesis. Clinical and Vaccine Immunology, 15 (2). pp. 320-326. ISSN 1556-6811

Hussain, M.A. and Naveed, S.A. and Sechi, L.A. and Ranjan, Sarita and Alvi, A. and Ahmed, I. and Ranjan, Akash and Mukhopadhyay, Sangita and Ahmed, N. (2008) Isocitrate Dehydrogenase of Helicobacter pylori Potentially Induces Humoral Immune Response in Subjects with Peptic Ulcer Disease and Gastritis. PLoS ONE, 3 (1). e1481. ISSN 1932-6203

Akhter, T. and Yellaboina, S. and Farhana, A. and Ranjan, Akash and Ahmed, N. and Hasnain, S.E. (2008) Genome scale portrait of cAMP-receptor protein (CRP) regulons in mycobacteria points to their role in pathogenesis. Gene, 407 (1-2). pp. 148-158. ISSN 1932-6203

Talwar, G.P. and Ahmed, N. and Saini, V. (2008) The use of the name Mycobacterium w for the leprosy immunotherapeutic bacillus creates confusion with M. tuberculosis-W (Beijing strain): A suggestion. Infection, Genetics and Evolution, 8 (1). pp. 100-101. ISSN 1567-1348

Radha Rama Devi, A. and Reddy, E.C. and Ranjan, S. and Bashyam, M.D. (2008) Molecular genetic analysis of patients from India with hypohidrotic ectodermal dysplasia reveals novel mutations in the EDA and EDAR genes. British Journal of Dermatology, 158 (1). pp. 163-167. ISSN 0007-0963

Naushad, S.M. and Jain, J.M.N. and Krishnaprasad, C. and Radha Rama Devi, A. (2008) Relationship between methionine synthase, methionine synthase reductase genetic polymorphisms and deep vein thrombosis among South Indians. Clinical Chemistry and Laboratory Medicine, 46 (1). pp. 73-79. ISSN 1434-6621

Sechi, L.A. and Paccagnini, D. and Salza, S. and Pacifico, A. and Ahmed, N. and Zanetti, S. (2008) Mycobacterium avium Subspecies paratuberculosis Bacteremia in Type 1 Diabetes Mellitus: An Infectious Trigger? Clinical Infectious Diseases, 46 (1). pp. 148-149. ISSN 1058-4838

Gowrishankar, J. (2007) Faculty positions in scientific/academic institutions and citizenship issues. Current Science , 93 (12). p. 1647. ISSN 0011-3891

Shamim, M.T.A. and Anwaruddin, M. and Nagarajaram, H.A. (2007) Support Vector Machine-based classification of protein folds using the structural properties of amino acid residues and amino acid residue pairs. Bioinformatics, 23 (24). pp. 3320-3327. ISSN 1367-4803

Archak, S. and Nagaraju, J. (2007) Computational Prediction of Rice (Oryza sativa) miRNA Targets. Genomics, Proteomics & Bioinformatics, 5 (3-4). pp. 196-206. ISSN 1672-0229

Alvi, A. and Devi, S.M. and Ahmed, I. and Hussain, M.A. and Rizwan, M. and Lamouliatte, H. and Megraud, F. and Ahmed, N. (2007) Microevolution of Helicobacter pylori Type IV Secretion Systems in an Ulcer Disease Patient over a Ten-Year Period. Journal of Clinical Microbiology, 45 (12). pp. 4039-4043. ISSN 0095-1137

Sechi, L.A. and Ruehl, A. and Ahmed, N. and Usai, D. and Paccagnini, D. and Felis, G.E. and Zanetti, S. (2007) Mycobacterium aviumsubspeciesparatuberculosisinfects and multiplies in enteric glial cells. World Journal of Gastroenterology, 13 (43). pp. 5731-5735. ISSN 1007-9327

Gandhe, A.S. and John, S.H. and Nagaraju, J. (2007) Noduler, A Novel Immune Up-Regulated Protein Mediates Nodulation Response in Insects. The Journal of Immunology, 179 (10). pp. 6943-6951. ISSN 0022-1767

Cheeran, A. and Kolli, N.R. and Sen, Ranjan (2007) The Site of Action of the Antiterminator Protein N from the Lambdoid Phage H-19B. Journal of Biological Chemistry, 282 (42). pp. 30997-31007. ISSN 0021-9258

Vemireddy, L.R. and Archak, S. and Nagaraju, J. (2007) Capillary Electrophoresis Is Essential for Microsatellite Marker Based Detection and Quantification of Adulteration of Basmati Rice ( Oryza sativa). Journal of Agricultural and Food Chemistry, 55 (20). pp. 8112-8117. ISSN 0021-8561

Ahmed, N. and Saini, V. and Raghuvanshi, S. and Khurana, J.P. and Tyagi, Akhilesh K. and Tyagi, Anil K. and Hasnain, S.E. (2007) Molecular Analysis of a Leprosy Immunotherapeutic Bacillus Provides Insights into Mycobacterium Evolution. PLoS ONE, 2 (10). e968. ISSN 1932-6203

Kanginakudru, S. and Royer, C. and Edupalli, S.V. and Jalabert, A. and Mauchamp, B. and Prasad, S.V. and Chavancy, G. and Couble, P. and Nagaraju, J. (2007) Targeting ie-1 gene by RNAi induces baculoviral resistance in lepidopteran cell lines and in transgenic silkworms. Insect Molecular Biology, 16 (5). pp. 635-644. ISSN 0962-1075

Akhter, Y. and Tundup, S. and Hasnain, S.E. (2007) Novel biochemical properties of a CRP/FNR family transcription factor from Mycobacterium tuberculosis. International Journal of Medical Microbiology, 297 (6). pp. 451-457. ISSN 1438-4221

Rasheedi, S. and Ramachandran, A. and Ehtesham, N.Z. and Hasnain, S.E. (2007) Biochemical characterization of Sf9 Sp-family-like protein factors reveals interesting features. Archives of Virology, 152 (10). pp. 1819-1828. ISSN 0304-8608

Biju, S.D. and Bocxlaer, I.V. and Giri, V.B. and Roelants, K. and Nagaraju, J. and Bossuyt, F. (2007) A new nightfrog, Nyctibatrachus minimus sp. nov.(Anura: Nyctibatrachidae): The smallest frog from India. Current Science, 93 (6). pp. 854-858. ISSN 0011-3891

Rasheedi, S. and Ghosh, S. and Suragani, M. and Tuteja, N. and Sopory, S.K. and Hasnain, S.E. and Ehtesham, N.Z. (2007) Pisum sativum contains a factor with strong homology to eIF5B. Gene, 399 (2). pp. 144-151. ISSN 0378-1119

Saxena, V. and Garg, S. and Ranjan, Sarita and Kochar, D. and Ranjan, Akash and Das, A. (2007) Analysis of elongation factor Tu (tuf A) of apicoplast from Indian Plasmodium vivax isolates. Infection, Genetics and Evolution, 7 (5). pp. 618-626. ISSN 1567-1348

Chalissery, J. and Banerjee, S. and Bandey, I. and Sen, Ranjan (2007) Transcription Termination Defective Mutants of Rho: Role of Different Functions of Rho in Releasing RNA from the Elongation Complex. Journal of Molecular Biology, 371 (4). pp. 855-872. ISSN 0022-2836

Vindal, V. and Suma, K. and Ranjan, Akash (2007) GntR family of regulators in Mycobacterium smegmatis: a sequence and structure based characterization. BMC Genomics, 8 (1). p. 289. ISSN 1471-2164

Bashyam, M.D. and Savithri, G.R. and Gopikrishna, M. and Narasimhan, C. (2007) A p.R870H mutation in the beta-cardiac myosin heavy chain 7 gene causes familial hypertrophic cardiomyopathy in several members of an Indian family. Canadian Journal of Cardiology, 23 (10). pp. 788-790. ISSN 0828-282X

Ravi Kumar, A. and Satish, V. and Balakrish Nair, G. and Nagaraju, J. (2007) Genetic characterization of Vibrio choleraestrains by inter simple sequence repeat-PCR. FEMS Microbiology Letters, 272 (2). pp. 251-258. ISSN 0378-1097

Aparna, D. and Kenchappa, P. and Sharma, S. and Peeters, J.K. and Ahmed, N. and Garg, P. and Das, T.P. and Hasnain, S.E. (2007) High-Resolution Genome Profiling DifferentiatedStaphylococcus epidermidisIsolated from Patients with Ocular Infections and Normal Individuals. Investigative Opthalmology & Visual Science, 48 (7). pp. 3239-3245. ISSN 1552-5783

Sechi, L.A. and Felis, G.E. and Ahmed, N. and Paccagnini, D. and Usai, D. and Ortu, S. and Molicotti, P. and Zanetti, S. (2007) Genome and transcriptome scale portrait of sigma factors in Mycobacterium avium subsp. paratuberculosis. Infection, Genetics and Evolution, 7 (4). pp. 424-432. ISSN 1567-1348

Terrance, D.G.C. and Thangamani, A. and Srivastava, Varsha (2007) Variations of Mitochondrial DNA Sequence in Three Breeds of Rabbit (Oryctolagus Cuniculus). DNA and Cell Biology, 26 (7). pp. 505-515. ISSN 1044-5498

Gandhe, A.S. and Janardhan, G. and Nagaraju, J. (2007) Immune upregulation of novel antibacterial proteins from silkmoths (Lepidoptera) that resemble lysozymes but lack muramidase activity. Insect Biochemistry and Molecular Biology, 37 (7). pp. 655-666. ISSN 0965-1748

Archak, S. and Lakshminarayanareddy, V. and Nagaraju, J. (2007) High-throughput multiplex microsatellite marker assay for detection and quantification of adulteration in Basmati rice (Oryza sativa). Electrophoresis, 28 (14). pp. 2396-2405. ISSN 0173-0835

Ahmed, N. and Majeed, A.A. and Ahmed, I. and Hussain, M.A. and Alvi, A. and Devi, S.M. and Rizwan, M. and Ranjan, Akash and Sechi, L.A. and Mégraud, F. (2007) genoBASE pylori: A genotype search tool and database of the human gastric pathogen Helicobacter pylori. Infection, Genetics and Evolution, 7 (4). pp. 463-468. ISSN 1567-1348

Devi, S.M. and Ahmed, I. and Francalacci, P. and Hussain, M.A. and Akhter, Y. and Alvi, A. and Sechi, L.A. and Mégraud, F. and Ahmed, N. (2007) Ancestral European roots of Helicobacter pylori in India. BMC Genomics, 8 (1). p. 184. ISSN 1471-2164

Banerjee, S. and Nandyala, A.K. and Raviprasad, P. and Ahmed, N. and Hasnain, S.E. (2007) Iron-Dependent RNA-Binding Activity of Mycobacterium tuberculosis Aconitase. Journal of Bacteriology, 189 (11). pp. 4046-4052. ISSN 0021-9193

Mudunuri, S.B. and Nagarajaram, H.A. (2007) IMEx: Imperfect Microsatellite Extractor. Bioinformatics, 23 (10). pp. 1181-1187. ISSN 1367-4803

Laishram, R.S. and Gowrishankar, J. (2007) Environmental regulation operating at the promoter clearance step of bacterial transcription. Genes & Development, 21 (10). pp. 1258-1272. ISSN 0890-9369

Goyal, K. and Mohanty, D. and Mande, S.C. (2007) PAR-3D: a server to predict protein active site residues. Nucleic Acids Research, 35 (Web Se). W503-W505. ISSN 0305-1048

Parveen, N. and Alvi, A. and Habeeb, A. and Khosla, Sanjeev and Khan, A.A. and Habibullah, C.M. (2007) Characterization of hepatic progenitors from human fetal liver using CD34 as a hepatic progenitor marker. World Journal of Gastroenterology, 13 (16). p. 2319. ISSN 1007-9327

Gita Kumari, and Singhal, P.K. and Subba Rao, M.R.K. and Mahalingam, S. (2007) Nuclear Transport of Ras-associated Tumor Suppressor Proteins: Different Transport Receptor Binding Specificities for Arginine-rich Nuclear Targeting Signals. Journal of Molecular Biology, 367 (5). pp. 1294-1311. ISSN 0022-2836

Manna, S.K. and Aggarwal, R.S. and Sethi, G. and Aggarwal, B.B. and Ramesh, G.T. (2007) Morin (3,5,7,2',4'-Pentahydroxyflavone) abolishes nuclear factor-kappaB activation induced by various carcinogens and inflammatory stimuli, leading to suppression of nuclear factor-kappaB-regulated gene expression and up-regulation of apoptosis. Clinical Cancer Research, 13 (7). pp. 2290-7. ISSN 1078-0432

Yellaboina, S. and Goyal, K. and Mande, S.C. (2007) Inferring genome-wide functional linkages in E. coli by combining improved genome context methods: Comparison with high-throughput experimental data. Genome Research, 17 (4). pp. 527-535. ISSN 1088-9051

Meglécz, E. and Anderson, S.J. and Bourguet, D. and Butcher, R. and Caldas, A. and Cassel-Lundhagen, A. and d'Acier, A.C. and Dawson, D.A. and Faure, N. and Fauvelot, C. and Franck, P. and Harper, G. and Keyghobadi, N. and Kluetsch, C. and Muthulakshmi, M. and Nagaraju, J. and Patt, A. and Péténian, F. and Silvain, J.-F. and Wilcock, H.R. (2007) Microsatellite flanking region similarities among different loci within insect species. Insect Molecular Biology, 16 (2). pp. 175-185. ISSN 0962-1075

Khan, N. and Ghousunnissa, S. and Jegadeeswaran, S.M. and Thiagarajan, D. and Hasnain, S.E. and Mukhopadhyay, Sangita (2007) Anti-B7-1/B7-2 antibody elicits innate-effector responses in macrophages through NF- B-dependent pathway. International Immunology, 19 (4). pp. 477-486. ISSN 0953-8178

Boddupalli, C.S. and Ghosh, S. and Rahim, S.C. and Nair, S. and Ehtesham, N.Z. and Hasnain, S.E. and Mukhopadhyay, Sangita (2007) Nitric oxide inhibits interleukin-12 p40 through p38 MAPK-mediated regulation of calmodulin and c-rel. Free Radical Biology and Medicine, 42 (5). pp. 686-697. ISSN 0891-5849

Raghavendra, P.B. and Sreenivasan, Y. and Manna, S.K. (2007) Oleandrin induces apoptosis in human, but not in murine cells: Dephosphorylation of Akt, expression of FasL, and alteration of membrane fluidity. Molecular Immunology, 44 (9). pp. 2292-2302. ISSN 0161-5890

Naushad, S.M. and Jain, J.M.N. and Angalena, M.R.K. and Prasad, C.K. and Radha Rama Devi, A. (2007) Hyperhomocysteinemia and the compound heterozygous state for methylene tetrahydrofolate reductase are independent risk factors for deep vein thrombosis among South Indians. Blood Coagulation & Fibrinolysis, 18 (2). pp. 113-117. ISSN 0957-5235

Ramasarma, T. (2007) Many faces of superoxide dismutase, originally known as erythrocuprein. Current Science , 92 (2). pp. 184-191. ISSN 0011-3891

Vidyasagar, M. and Hasnain, S.E. and Mande, S.C. and Nagarajaram, H.A. and Ranjan, Akash and Acharya, M.S. and Anwaruddin, M. and Arun, S.K. and Gyanrajkumar, and Kumar, D. and Priya, S. and Ranjan, S. and Reddi, B.R. and Seshadri, J. and Sravan Kumar, P. and Swaminathan, S. and Uma Devi, P. and Vindal, V. and Vijaykrishnan, S. (2007) BioSuite: A comprehensive bioinformatics software package (A unique industry-academia collaboration). Current Science, 92 (1). pp. 29-38. ISSN 0011-3891

Akhter, Y. and Ahmed, I. and Devi, S.M. and Ahmed, N. (2007) The co-evolved Helicobacter pylori and gastric cancer: trinity of bacterial virulence, host susceptibility and lifestyle. Infectious Agents and Cancer, 2 (1). p. 2. ISSN 1750-9378

Sreenu , V.B. and Kumar, P. and Nagaraju, J. and Nagarajaram, H.A. (2007) Simple sequence repeats in mycobacterial genomes. Journal of Biosciences, 32 (1). pp. 3-15. ISSN 0250-5991

Vindal, V. and Ranjan, Sarita and Ranjan, Akash (2007) In silico analysis and characterization of GntR family of regulators from Mycobacterium tuberculosis. Tuberculosis, 87 (3). pp. 242-247. ISSN 14729792

Salih, B.A. and Abasiyanik, M.F. and Ahmed, N. (2007) A preliminary study on the genetic profile of cag pathogenicity-island and other virulent gene loci of Helicobacter pylori strains from Turkey. Infection, Genetics and Evolution, 7 (4). pp. 509-512. ISSN 1567-1348

Mukhopadhyay, Sangita and Nair, S. and Hasnain, S.E. (2007) Nitric Oxide: Friendly Rivalry in Tuberculosis. Current Signal Transduction Therapy, 2 (2). pp. 121-128. ISSN 1574-3624

Gokul, G. and Gautami, B. and Malathi, S. and Sowjanya, A.P. and Usha Rani, P. and Jain, M. and Ramakrishna, Gayatri and Khosla, Sanjeev (2007) DNA methylation profile at the DNMT3L promoter: a potential biomarker for cervical cancer. Epigenetics, 2 (2). pp. 80-5. ISSN 1559-2308

Archak, S. and Meduri, E. and Kumar, P.S. and Nagaraju, J. (2007) InSatDb: a microsatellite database of fully sequenced insect genomes. Nucleic Acids Research, 35 (Suppl). D36-D39. ISSN 0305-1048

Archak, S. and Nagaraju, J. (2007) InSatDb: A Genomic Tool for Insect Geneticists. Fly, 1 (5). pp. 279-281. ISSN 1933-6934

Bocxlaer, I.V. and Roelants, K. and Biju, S.D. and Nagaraju, J. and Bossuyt, F. (2006) Late Cretaceous Vicariance in Gondwanan Amphibians. PLoS ONE, 1 (1). e74. ISSN 1932-6203

Ranjan, Sarita and Kumar, G.R. and Ranjan, Akash (2006) MycoperonDB: a database of computationally identified operons and transcriptional units in Mycobacteria. BMC Bioinformatics, 7 (Suppl ). S9. ISSN 14712105

Subba Rao, M.R.K. and Gita Kumari, and Balasundaram, D. and Sankaranarayanan, R. and Mahalingam, S. (2006) A Novel Lysine-rich Domain and GTP Binding Motifs Regulate the Nucleolar Retention of Human Guanine Nucleotide Binding Protein, GNL3L. Journal of Molecular Biology, 364 (4). pp. 637-654. ISSN 0022-2836

Achary, M.S. and Reddy, A.B.M. and Chakrabarti, S. and Panicker, S.G. and Mandal, A.K. and Ahmed, N. and Balasubramanian, D. and Hasnain, S.E. and Nagarajaram, H.A. (2006) Disease-Causing Mutations in Proteins: Structural Analysis of the CYP1b1 Mutations Causing Primary Congenital Glaucoma in Humans. Biophysical Journal, 91 (12). pp. 4329-4339. ISSN 0006-3495

Goyal, K. and Qamra, R. and Mande, S.C. (2006) Multiple Gene Duplication and Rapid Evolution in the groEL Gene: Functional Implications. Journal of Molecular Evolution, 63 (6). pp. 781-787. ISSN 0022-2844

Singhal, P.K. and Rajendra Kumar, P. and Subba Rao, M.R.K. and Mahalingam, S. (2006) Nuclear Export of Simian Immunodeficiency Virus Vpx Protein. Journal of Virology, 80 (24). pp. 12271-12282. ISSN 0022-538X

Kashyap, V.K. and Guha, S. and Sitalaximi, T. and Hima Bindu, G. and Hasnain, S.E. and Trivedi, R. (2006) Genetic structure of Indian populations based on fifteen autosomal microsatellite loci. BMC Genetics, 7 (1). p. 28. ISSN 1471-2156

Sechi, L.A. and Gazouli, M. and Sieswerda, L.E. and Molicotti, P. and Ahmed, N. and Ikonomopoulos, J. and Scanu, A.M. and Paccagnini, D. and Zanetti, S. (2006) Relationship between Crohn's disease, infection with Mycobacterium avium subspecies paratuberculosis and SLC11A1 gene polymorphisms in Sardinian patients. World Journal of Gastroenterology, 12 (44). pp. 7161-7164. ISSN 1007-9327

Nandineni, M.R. (2006) Annual Review of Genomics and Human Genetics 2005, Aravinda Chakravarti and Eric Green (eds). Current Science, 91 (10). pp. 1413-1415. ISSN 0011-3891

Ahmed, N. and Devi, S.M. and de los Á Valverde, M. and Vijayachari, P. and Machang'u, R.S. and Ellis, W.A. and Hartskeerl, R.A. (2006) Multilocus sequence typing method for identification and genotypic classification of pathogenic Leptospira species. Annals of Clinical Microbiology and Antimicrobials, 5 (1). p. 28. ISSN 1476-0711

Archak, S. and Nagaraju, J. (2006) Eicosapentapeptide repeats (EPRs): novel repeat proteins specific to flowering plants. Bioinformatics, 22 (20). pp. 2455-2458. ISSN 1367-4803

Pani, B. and Banerjee, B. and Chalissery, J. and Muralimohan, A. and Loganathan, R.M. and Suganthan, R.B. and Sen, Ranjan (2006) Mechanism of Inhibition of Rho-dependent Transcription Termination by Bacteriophage P4 Protein Psu. Journal of Biological Chemistry, 281 (36). pp. 26491-26500. ISSN 0021-9258

Akif, M. and Akhter, Y. and Hasnain, S.E. and Mande, S.C. (2006) Crystallization and preliminary X-ray crystallographic studies ofMycobacterium tuberculosisCRP/FNR family transcription regulator. Acta Crystallographica Section F Structural Biology and Crystallization Communications, 62 (9). pp. 873-875. ISSN 1744-3091

Radha Rama Devi, A. and Gopikrishna, M. and Ratheesh, R. and Savithri, G.R. and Gowrishankar, S. and Bashyam, M.D. (2006) Farber lipogranulomatosis: clinical and molecular genetic analysis reveals a novel mutation in an Indian family. Journal of Human Genetics, 51 (9). pp. 811-814. ISSN 1434-5161

Gutierrez, M.C. and Ahmed, N. and Willery, E. and Narayanan, S. and Hasnain, S.E. and Chauhan, D.S. and Katoch, V.M. and Vincent, V. and Locht, C. and Supply, P. (2006) Predominance of Ancestral Lineages ofMycobacterium tuberculosisin India. Emerging Infectious Diseases, 12 (7). pp. 1367-1374. ISSN 1080-6040

Negi, D.S. and Alam, M. and Bhavani, S.A. and Nagaraju, J. (2006) Multistep microsatellite mutation in the maternally transmitted locus D13S317: a case of maternal allele mismatch in the child. International Journal of Legal Medicine, 120 (5). pp. 286-292. ISSN 0937-9827

Arunkumar, K.P. and Metta, M. and Nagaraju, J. (2006) Molecular phylogeny of silkmoths reveals the origin of domesticated silkmoth, Bombyx mori from Chinese Bombyx mandarina and paternal inheritance of Antheraea proylei mitochondrial DNA. Molecular Phylogenetics and Evolution, 40 (2). pp. 419-27. ISSN 1055-7903

Devi, S.M. and Ahmed, I. and Khan, A.A. and Rahman, S.A. and Alvi, A. and Sechi, L.A. and Ahmed, N. (2006) Genomes of Helicobacter pylori from native Peruvians suggest admixture of ancestral and modern lineages and reveal a western type cag-pathogenicity island. BMC Genomics, 7 (1). p. 191. ISSN 1471-2164

Gandhe, A.S. and Arunkumar, K.P. and John, S.H. and Nagaraju, J. (2006) Analysis of bacteria-challenged wild silkmoth, Antheraea mylitta (lepidoptera) transcriptome reveals potential immune genes. BMC Genomics, 7 (1). p. 184. ISSN 1471-2164

Ranjan, Sarita and Seshadri, J. and Vindal, V. and Yellaboina, S. and Ranjan, Akash (2006) iCR: a web tool to identify conserved targets of a regulatory protein across the multiple related prokaryotic species. Nucleic Acids Research, 34 (Web Se). W584-W587. ISSN 0305-1048

Qamra, R. and Prakash, P. and Aruna, B. and Hasnain, S.E. and Mande, S.C. (2006) The 2.15 Å Crystal Structure ofMycobacterium tuberculosisChorismate Mutase Reveals an Unexpected Gene Duplication and Suggests a Role in Host−Pathogen Interactions†. Biochemistry, 45 (23). pp. 6997-7005. ISSN 0006-2960

Johny, S. and Kanginakudru, S. and Muralirangan, M.C. and Nagaraju, J. (2006) Morphological and molecular characterization of a new microsporidian (Protozoa: Microsporidia) isolated from Spodoptera litura (Fabricius) (Lepidoptera: Noctuidae). Parasitology, 132 (Pt 6). pp. 803-814. ISSN 0031-1820

Khurad, A.M. and Kanginakudru, S. and Qureshi, S.O. and Rathod, M.K. and Rai, M.M. and Nagaraju, J. (2006) A new Bombyx mori larval ovarian cell line highly susceptible to nucleopolyhedrovirus. Journal of Invertebrate Pathology, 92 (2). pp. 59-65. ISSN 0022-2011

Radha Rama Devi, A. and Naushad, S.M. and Krishnaprasad, C. (2006) Evaluation of total plasma homocysteine in Indian newborns using heel-prick samples. The Indian Journal of Pediatrics, 73 (6). pp. 503-508. ISSN 0019-5456

Manna, S.K. and Rangasamy, T. and Wise, K. and Sarkar, S. and Shishodia, S. and Biswal, S. and Ramesh, G.T. (2006) Long term environmental tobacco smoke activates nuclear transcription factor-kappa B, activator protein-1, and stress responsive kinases in mouse brain. Biochemical Pharmacology, 71 (11). pp. 1602-1609. ISSN 0006-2952

Yellaboina, S. and Ranjan, Sarita and Vindal, V. and Ranjan, Akash (2006) Comparative analysis of iron regulated genes in mycobacteria. FEBS Letters, 580 (11). pp. 2567-2576. ISSN 0014-5793

Kenchappa, P. and Rao, K.R. and Ahmed, N. and Joshi, S. and Ghousunnissa, S. and Vijayalakshmi, V. and Murthy, K.J.R. (2006) Fluorescent amplified fragment length polymorphism (FAFLP) based molecular epidemiology of hospital infections in a tertiary care setting in Hyderabad, India. Infection, Genetics and Evolution, 6 (3). pp. 220-227. ISSN 1567-1348

Sreenu, V.B. and Kumar, P. and Nagaraju, J. and Nagarajaram, H.A. (2006) Microsatellite polymorphism across the M. tuberculosis and M. bovis genomes: Implications on genome evolution and plasticity. BMC Genomics, 7 (1). p. 78. ISSN 1471-2164

Ahmed, K.S. and Khan, A.A. and Ahmed, I. and Tiwari, S. and Habeeb, M.A. and Ali, S.M. and Ahi, J.D. and Abid, Z. and Alvi, A. and Hussain, M.A. and Ahmed, N. and Habibullah, C.M. (2006) Prevalence study to elucidate the transmission pathways of Helicobacter pylori at oral and gastroduodenal sites of a South Indian population. Singapore Medical Journal, 47 (4). pp. 291-296. ISSN 0037-5675

Manna, S.K. and Sreenivasan, Y. and Sarkar, A. (2006) Cardiac glycoside inhibits IL-8-induced biological responses by downregulating IL-8 receptors through altering membrane fluidity. Journal of Cellular Physiology, 207 (1). pp. 195-207. ISSN 0021-9541

Sarkar, S. and Wise, K.C. and Manna, S.K. and Ramesh, V. and Yamauchi, K. and Thomas, R.L. and Wilson, B.L. and Kulkarni, A.D. and Pellis, N.R. and Ramesh, G.T. (2006) Activation of activator protein-1 in mouse brain regions exposed to simulated microgravity. In Vitro Cellular & Developmental Biology - Animal, 42 (3-4). pp. 96-99. ISSN 1543-706X

Srivastava, Varsha (2006) DNA Fingerprinting in the Criminal Justice System: An Overview. DNA and Cell Biology, 25 (3). pp. 181-188. ISSN 1044-5498

Manna, S.K. and Sarkar, A. and Sreenivasan, Y. (2006) α-melanocyte-stimulating hormone down-regulates CXC receptors through activation of neutrophil elastase. European Journal of Immunology, 36 (3). pp. 754-769. ISSN 0014-2980

Khosla, Sanjeev and Mendiratta, G. and Brahmachari, V. (2006) Genomic imprinting in the mealybugs. Cytogenetic and Genome Research, 113 (1-4). pp. 41-52. ISSN 1424-8581

Tundup, S. and Akhter, Y. and Thiagarajan, D. and Hasnain, S.E. (2006) Clusters of PE and PPE genes of Mycobacterium tuberculosis are organized in operons: Evidence that PE Rv2431c is co-transcribed with PPE Rv2430c and their gene products interact with each other. FEBS Letters, 580 (5). pp. 1285-1293. ISSN 0014-5793

Khan, N. and Rahim, S.S. and Boddupalli, C.S. and Ghousunnissa, S. and Padma, S. and Pathak, Niteen and Thiagarajan, D. and Hasnain, S.E. and Mukhopadhyay, Sangita (2006) Hydrogen peroxide inhibits IL-12 p40 induction in macrophages by inhibiting c-rel translocation to the nucleus through activation of calmodulin protein. Blood, 107 (4). pp. 1513-1520. ISSN 0006-4971

Vijayakrishnan, S. and Qamra, R. and Verma, C.S. and Sen, Ranjan and Mande, S.C. (2006) Cation-Mediated Interplay of Loops in Chaperonin-10. Journal of Biomolecular Structure and Dynamics, 23 (4). pp. 365-375. ISSN 0739-1102

Banerjee, S. and Chalissery, J. and Bandey, I. and Sen, Ranjan (2006) Rho-dependent transcription termination: more questions than answers. Journal of Microbiology (Seoul, Korea), 44 (1). pp. 11-22. ISSN 1225-8873

Sechi, L.A. and Mara, L. and Cappai, P. and Frothingam, R. and Ortu, S. and Leoni, A. and Ahmed, N. and Zanetti, S. (2006) Immunization with DNA vaccines encoding different mycobacterial antigens elicits a Th1 type immune response in lambs and protects against Mycobacterium avium subspecies paratuberculosis infection. Vaccine, 24 (3). pp. 229-235. ISSN 0264-410X

Sechi, L.A. and Ahmed, N. and Felis, G.E. and Duprè, I. and Cannas, S. and Fadda, G. and Bua, A. and Zanetti, S. (2006) Immunogenicity and cytoadherence of recombinant heparin binding haemagglutinin (HBHA) of Mycobacterium avium subsp. paratuberculosis: Functional promiscuity or a role in virulence? Vaccine, 24 (3). pp. 236-243. ISSN 0264-410X

Kenchappa, P. and Aparna, D. and Ahmed, N. and Pathengay, A. and Das, T.P. and Hasnain, S.E. and Sharma, S. (2006) Fluorescent amplified fragment length polymorphism (FAFLP) genotyping demonstrates the role of biofilm-producing methicillin-resistant periocular Staphylococcus epidermidis strains in postoperative endophthalmitis. BMC Ophthalmology, 6 (1). p. 1. ISSN 14712415

Singhal, P.K. and Kumar, P.R. and Rao, M.R.K.S. and Kyasani, M. and Mahalingam, S. (2006) Simian Immunodeficiency Virus Vpx Is Imported into the Nucleus via Importin Alpha-Dependent and -Independent Pathways. Journal of Virology, 80 (1). pp. 526-536. ISSN 0022-538X

Rao, K.R. and Ahmed, N. and Srinivas, S. and Sechi, L.A. and Hasnain, S.E. (2006) Rapid Identification of Mycobacterium tuberculosis Beijing Genotypes on the Basis of the Mycobacterial Interspersed Repetitive Unit Locus 26 Signature. Journal of Clinical Microbiology, 44 (1). pp. 274-277. ISSN 0095-1137

Ramasarma, T. and Rao, A.V.S. (2006) Decavanadate interacts with microsomal NADH oxidation system and enhances cytochrome c reduction. Molecular and Cellular Biochemistry, 281 (1-2). pp. 139-144. ISSN 0300-8177

Du, X. and Rao, M.R.K.S. and Chen, X.Q. and Wu, W. and Mahalingam, S. and Balasundaram, D. (2006) The Homologous Putative GTPases Grn1p from Fission Yeast and the Human GNL3L Are Required for Growth and Play a Role in Processing of Nucleolar Pre-rRNA. Molecular Biology of the Cell, 17 (1). pp. 460-474. ISSN 1059-1524

Prashanth, K. and Badrinath, S. (2006) Nosocomial infections due to Acinetobacter species: Clinical findings, risk and prognostic factors. Indian Journal of Medical Microbiology, 24 (1). p. 39. ISSN 0255-0857

Ranjan, Sarita and Yellaboina, S. and Ranjan, Akash (2006) IdeR in Mycobacteria: From Target Recognition to Physiological Function. Critical Reviews in Microbiology, 32 (2). pp. 69-75. ISSN 1040-841X

Kazim, S.N. and Sarin, S.K. and Sharma, B.C. and Khan, L.A. and Hasnain, S.E. (2006) Characterization of Naturally Occurring and Lamivudine-Induced Surface Gene Mutants of Hepatitis B Virus in Patients with Chronic Hepatitis B in India. Intervirology, 49 (3). pp. 152-160. ISSN 0300-5526

Sowjanya, A.P. and Jain, M. and Usha Rani, P. and Padma, S. and Das, M. and Shah, K.V. and Rao, B.N. and Radha Rama Devi, A. and Gravitt, P.E. and Ramakrishna, Gayatri (2005) Prevalence and distribution of high-risk human papilloma virus (HPV) types in invasive squamous cell carcinoma of the cervix and in normal women in Andhra Pradesh, India. BMC Infectious Diseases, 5. p. 116. ISSN 1471-2334

Ali, S. and Khan, A.A. and Ahmed, I. and Musaddiq, M. and Ahmed, K.S. and Polasa, H. and Rao, L.V. and Habibullah, C.M. and Sechi, L.A. and Ahmed, N. (2005) Antimicrobial activities of Eugenol and Cinnamaldehyde against the human gastric pathogen Helicobacter pylori. Annals of Clinical Microbiology and Antimicrobials, 4 (1). p. 20. ISSN 1476-0711

Kenchappa, P. and Sangwan, V.S. and Ahmed, N. and Rao, K.R. and Pathengay, A. and Mathai, A. and Mansoori, T. and Das, T.P. and Hasnain, S.E. and Sharma, S. (2005) High-resolution genotyping of Pseudomonas aeruginosa strains linked to acute post cataract surgery endophthalmitis outbreaks in India. Annals of Clinical Microbiology and Antimicrobials, 4 (1). p. 19. ISSN 1476-0711

Akif, M. and Suhre, K. and Verma, C.S. and Mande, S.C. (2005) Conformational flexibility of Mycobacterium tuberculosisthioredoxin reductase: crystal structure and normal-mode analysis. Acta Crystallographica Section D Biological Crystallography, 61 (12). pp. 1603-1611. ISSN 0907-4449

Granneman, S. and Nandineni, M.R. and Baserga, S.J. (2005) The Putative NTPase Fap7 Mediates Cytoplasmic 20S Pre-rRNA Processing through a Direct Interaction with Rps14. Molecular and Cellular Biology, 25 (23). pp. 10352-10364. ISSN 0270-7306

Rao, K.R. and Kauser, F. and Srinivas, S. and Zanetti, S. and Sechi, L.A. and Ahmed, N. and Hasnain, S.E. (2005) Analysis of genomic downsizing on the basis of region-of-difference polymorphism profiling of Mycobacterium tuberculosis patient isolates reveals geographic partitioning. Journal of Clinical Microbiology, 43 (12). pp. 5978-5982. ISSN 0095-1137

Ali, M. and Khan, A.A. and Tiwari, S. and Ahmed, N. and Rao, L.V. and Habibullah, C.M. (2005) Association between cag-pathogenicity island inHelicobacter pyloriisolates from peptic ulcer, gastric carcinoma, and non-ulcer dyspepsia subjects with histological changes. World Journal of Gastroenterology, 11 (43). pp. 6815-6822. ISSN 1007-9327

Rajendra Kumar, P. and Singhal, P.K. and Subba Rao, M.R.K. and Mahalingam, S. (2005) Phosphorylation by MAPK Regulates Simian Immunodeficiency Virus Vpx Protein Nuclear Import and Virus Infectivity. Journal of Biological Chemistry, 280 (9). pp. 8553-8563. ISSN 0021-9258

Miao, X.-X. and Xub, S.-J. and Li, M.-H. and Li, M.-W. and Huang, J.-H. and Dai, F.-Y. and Marino, S.W. and Mills, D.R. and Zeng, P. and Mita, K. and Jia, S.-H. and Zhang, Y. and Liu, W.-B. and Xiang, H. and Guo, Q.-H. and Xu, A.-Y. and Kong, X.-Y. and Lin, H.-X. and Shi, Y.-Z. and Lu, G. and Zhang, X. and Huang, W. and Yasukochi, Y. and Sugasaki, T. and Shimada, T. and Nagaraju, J. and Xiang, Z.-H. and Wang, S.-Y. and Goldsmith, M.R. and Lu, C. and Zhao, G.-P. and Huang, Y.-P. (2005) Simple sequence repeat-based consensus linkage map of Bombyx mori. Proceedings of the National Academy of Sciences, 102 (45). pp. 16303-16308. ISSN 0027-8424

Prashanth, K. and Badrinath, S. (2005) Epidemiological investigation of nosocomial Acinetobacter infections using arbitrarily primed PCR & pulse field gel electrophoresis. The Indian Journal of Medical Research, 122 (5). pp. 408-18. ISSN 0971-5916

Ahmed, N. (2005) 23 years of the discovery of Helicobacter pylori: Is the debate over? Annals of Clinical Microbiology and Antimicrobials, 4 (1). p. 17. ISSN 1476-0711

Sechi, L.A. and Gazouli, M. and Ikonomopoulos, J. and Lukas, J.C. and Scanu, A.M. and Ahmed, N. and Fadda, G. and Zanetti, S. (2005) Mycobacterium avium subsp. paratuberculosis, Genetic Susceptibility to Crohn's Disease, and Sardinians: the Way Ahead. Journal of Clinical Microbiology, 43 (10). pp. 5275-5277. ISSN 0095-1137

Tiwari, S. and Khan, A.A. and Ahmed, K.S. and Ali, S.M. and Ahmed, I. and Habeeb, A. and Kauser, F. and Hussain, M.A. and Ahmed, N. and Habibullah, C.M. (2005) Polymerase chain reaction based analysis of the cytotoxin associated gene pathogenicity island of Helicobacter pylori from saliva: An approach for rapid molecular genotyping in relation to disease status. Journal of Gastroenterology and Hepatology, 20 (10). pp. 1560-1566. ISSN 0815-9319

Banerjee, S. and Nandyala, A.K. and Raviprasad, P. and Katoch, V. and Hasnain, S.E. (2005) Comparison of Mycobacterium tuberculosis isocitrate dehydrogenases (ICD-1 and ICD-2) reveals differences in coenzyme affinity, oligomeric state, pH tolerance and phylogenetic affiliation. BMC Biochemistry, 6 (1). p. 20. ISSN 1471-2091

Silswal, N. and Singh, A.K. and Aruna, B. and Mukhopadhyay, Sangita and Ghosh, S. and Ehtesham, N.Z. (2005) Human resistin stimulates the pro-inflammatory cytokines TNF-α and IL-12 in macrophages by NF-κB-dependent pathway. Biochemical and Biophysical Research Communications, 334 (4). pp. 1092-1101. ISSN 0006-291X

Cheeran, A. and Suganthan, R.B. and Swapna, G. and Bandey, I. and Achary, M.S. and Nagarajaram, H.A. and Sen, Ranjan (2005) Escherichia coli RNA Polymerase Mutations Located Near the Upstream Edge of an RNA:DNA Hybrid and the Beginning of the RNA-exit Channel are Defective for Transcription Antitermination by the N Protein from Lambdoid Phage H-19B. Journal of Molecular Biology, 352 (1). pp. 28-43. ISSN 0022-2836

Sah, N.K. and Singh, S.N.P. and Sahdev, S. and Banerji, S. and Jha, V. and Khan, Z. and Hasnain, S.E. (2005) Indian herb 'Sanjeevani' (Selaginella bryopteris) can promote growth and protect against heat shock and apoptotic activities of ultra violet and oxidative stress. Journal of Biosciences, 30 (4). pp. 499-505. ISSN 0250-5991

Qamra, R. and Mande, S.C. and Coates, A.R.M. and Henderson, B. (2005) The unusual chaperonins of Mycobacterium tuberculosis. Tuberculosis, 85 (5-6). pp. 385-394. ISSN 1472-9792

Manna, S.K. and Sarkar, S. and Barr, J. and Wise, K. and Barrera, E.V. and Jejelowo, O. and Rice-Ficht, A.C. and Ramesh, G.T. (2005) Single-Walled Carbon Nanotube Induces Oxidative Stress and Activates Nuclear Transcription Factor-κB in Human Keratinocytes. Nano Letters, 5 (9). pp. 1676-1684. ISSN 1530-6984

Manna, P. and Singh, R. and Narang, K.K. and Manna, S.K. (2005) Synthesis, antifungal, antitumor and anti-inflammatory activities of some new 5-substituted arylimino-3-(2,4-diethoxyarylimino)-1,2,4-dithiazolidines. Indian Journal of Chemistry B, 44B. pp. 1880-1886. ISSN 0376-4699

Nagaraja, G.M. and Mahesh, G. and Satish, V. and Madhu, M. and Muthulakshmi, M. and Nagaraju, J. (2005) Genetic mapping of Z chromosome and identification of W chromosome-specific markers in the silkworm, Bombyx mori. Heredity, 95 (2). pp. 148-157. ISSN 0018-067X

Vijay Kumar, S. and Ranjan, Sarita and Saxena, V. and Rajesh, V. and Roy, S.K. and Kochar, D. and Ranjan, Akash and Das, A. (2005) Plasmodium falciparum: Genetic diversity of C-terminal region of MSP-1 in isolates from Indian sub-continent. Experimental Parasitology, 110 (4). pp. 384-388. ISSN 0014-4894

Prouzet-Mauleon, V. and Hussain, M.A. and Lamouliatte, H. and Kauser, F. and Megraud, F. and Ahmed, N. (2005) Pathogen Evolution In Vivo: Genome Dynamics of Two Isolates Obtained 9 Years Apart from a Duodenal Ulcer Patient Infected with a Single Helicobacter pylori Strain. Journal of Clinical Microbiology, 43 (8). pp. 4237-4241. ISSN 0095-1137

Habibullah, C.M. and Habeeb, M.A. and Ahmed, N. (2005) The endangered gastric pathogen Helicobacter pylori: to eradicate or not? The Indian Journal of Medical Research, 122 (2). pp. 93-5. ISSN 0971-5916

Kaur, Rupinder and Domergue, R. and Zupancic, M.L. and Cormack, B.P. (2005) A yeast by any other name: Candida glabrata and its interaction with the host. Current Opinion in Microbiology, 8 (4). pp. 378-384. ISSN 1369-5274

Deshpande, A. and Nimsadkar, S. and Mande, S.C. (2005) Effect of alcohols on protein hydration: crystallographic analysis of hen egg-white lysozyme in the presence of alcohols. Acta Crystallographica Section D Biological Crystallography, 61 (7). pp. 1005-1008. ISSN 0907-4449

Bashyam, M.D. and Bair, R. and Kim, Y.H. and Wang, P. and Hernandez-Boussard, T. and Karikari, C.A. and Tibshirani, R. and Maitra, A. and Pollack, J.R. (2005) Array-Based Comparative Genomic Hybridization Identifies Localized DNA Amplifications and Homozygous Deletions in Pancreatic Cancer. Neoplasia, 7 (6). pp. 556-562. ISSN 1476-5586

Prakash, P. and Pathak, Niteen and Hasnain, S.E. (2005) pheA (Rv3838c) of Mycobacterium tuberculosis Encodes an Allosterically Regulated Monofunctional Prephenate Dehydratase That Requires Both Catalytic and Regulatory Domains for Optimum Activity. Journal of Biological Chemistry, 280 (21). pp. 20666-20671. ISSN 0021-9258

Kauser, F. and Hussain, M.A. and Ahmed, I. and Srinivas, S. and Devi, S.M. and Majeed, A.A. and Rao, K.R. and Khan, A.A. and Sechi, L.A. and Ahmed, N. (2005) Comparative genomics of Helicobacter pylori isolates recovered from ulcer disease patients in England. BMC Microbiology, 5 (1). p. 32. ISSN 1471-2180

Prakash, P. and Aruna, B. and Sardesai, A.A. and Hasnain, S.E. (2005) Purified Recombinant Hypothetical Protein Coded by Open Reading Frame Rv1885c of Mycobacterium tuberculosis Exhibits a Monofunctional AroQ Class of Periplasmic Chorismate Mutase Activity. Journal of Biological Chemistry, 280 (20). pp. 19641-19648. ISSN 0021-9258

Prakash, P. and Yellaboina, S. and Ranjan, Akash and Hasnain, S.E. (2005) Computational prediction and experimental verification of novel IdeR binding sites in the upstream sequences of Mycobacterium tuberculosis open reading frames. Bioinformatics, 21 (10). pp. 2161-2166. ISSN 1367-4803

Qamra, R. and Prakash, P. and Aruna, B. and Hasnain, S.E. and Mande, S.C. (2005) Crystallization and preliminary X-ray crystallographic studies ofMycobacterium tuberculosischorismate mutase. Acta Crystallographica Section F Structural Biology and Crystallization Communications, 61 (5). pp. 473-475. ISSN 1744-3091

Padma, S. and Sowjanya, A.P. and Poli, Usha and Jain, Meenakshi and Rao, B.N. and Ramakrishna, Gayatri (2005) Downregulation of calcineurin activity in cervical carcinoma. Cancer Cell International, 5 (1). p. 7. ISSN 1475-2867

Kauser, F. and Hussain, M.A. and Ahmed, I. and Ahmad, N. and Habeeb, A. and Khan, A.A. and Ahmed, N. (2005) Comparing Genomes of Helicobacter pylori Strains from the High-Altitude Desert of Ladakh, India. Journal of Clinical Microbiology, 43 (4). pp. 1538-1545. ISSN 0095-1137

Felix, K. and Manna, S.K. and Wise, K. and Barr, J. and Ramesh, G.T. (2005) Low levels of arsenite activates nuclear factor-kappaB and activator protein-1 in immortalized mesencephalic cells. Journal of Biochemical and Molecular Toxicology, 19 (2). pp. 67-77. ISSN 1095-6670

Marec, F. and Neven, L.G. and Robinson, A.S. and Vreysen, M. and Goldsmith, M.R. and Nagaraju, J. and Franz, G. (2005) Development of genetic sexing strains in Lepidoptera: from traditional to transgenic approaches. Journal of Economic Entomology, 98 (2). pp. 248-259. ISSN 0022-0493

Varadarajan, P. and Mahalingam, S. and Liu, P. and Ng, S.B. and Gandotra, S. and Dorairajoo, D.S. and Balasundaram, D. (2005) The Functionally Conserved Nucleoporins Nup124p from Fission Yeast and the Human Nup153 Mediate Nuclear Import and Activity of the Tf1 Retrotransposon and HIV-1 Vpr. Molecular Biology of the Cell, 16 (4). pp. 1823-1838. ISSN 1059-1524

Kaur, K. and Reddy, A.B.M. and Mukhopadhyay, A. and Mandal, A.K. and Hasnain, S.E. and Ray, K. and Thomas, R. and Balasubramanian, D. and Chakrabarti, S. (2005) Myocilin gene implicated in primary congenital glaucoma. Clinical Genetics, 67 (4). pp. 335-340. ISSN 0009-9163

Manna, S.K. and Ramesh, G.T. (2005) Interleukin-8 Induces Nuclear Transcription Factor- B through a TRAF6-dependent Pathway. Journal of Biological Chemistry, 280 (8). pp. 7010-7021. ISSN 0021-9258

Rahim, S.S. and Khan, N. and Boddupalli, C.S. and Hasnain, S.E. and Mukhopadhyay, Sangita (2005) Interleukin-10 (IL-10) mediated suppression of IL-12 production in RAW 264.7 cells also involves c-rel transcription factor. Immunology, 114 (3). pp. 313-321. ISSN 0019-2805

Ramasarma, T. and Ravishankar, H.N. (2005) Formation of an oxo-radical of peroxovanadate during reduction of diperoxovanadate with vanadyl sulfate or ferrous sulfate. Biochimica et Biophysica Acta (BBA) - General Subjects, 1722 (1). pp. 30-35. ISSN 0304-4165

Manna, P. and Narang, K.K. and Manna, S.K. (2005) 1,2,4-thiadiazolidine derivative inhibits nuclear transcription factor-?B and its dependent genes activation but induces apoptosis. International Journal of Cancer, 113 (4). pp. 549-560. ISSN 0020-7136

Chakrabarti, S. and Kaur, K. and Sreelatha, K. and Acharya, M. and Devi, K.R. and Mukhopadhyay, A. and Mandal, A.K. and Hasnain, S.E. and Chandrasekhar, G. and Thomas, R. and Ray, K. (2005) Gln48His is the prevalent myocilin mutation in primary open angle and primary congenital glaucoma phenotypes in India. Molecular Vision, 11. pp. 111-3. ISSN 1090-0535

Singh, Arvind and Sowjanya, A.P. and Ramakrishna, Gayatri (2005) The wild-type Ras: road ahead. The FASEB Journal, 19 (2). pp. 161-169. ISSN 0892-6638

Ahmed, N. and Sechi, L.A. (2005) Helicobacter pylori and gastroduodenal pathology: new threats of the old friend. Annals of Clinical Microbiology and Antimicrobials, 4 (1). p. 1. ISSN 1476-0711

Prasad, M.D. and Muthulakshmi, M. and Arunkumar, K.P. and Madhu, M. and Sreenu, V.B. and Pavithra, V. and Bose, B. and Nagarajaram, H.A. and Mita, K. and Shimada, T. and Nagaraju, J. (2005) SilkSatDb: a microsatellite database of the silkworm, Bombyx mori. Nucleic Acids Research, 33 (Supp 1). D403-D406. ISSN 1362-4962

Prasad, M.D. and Muthulakshmi, M. and Madhu, M. and Archak, S. and Mita, K. and Nagaraju, J. (2005) Survey and Analysis of Microsatellites in the Silkworm, Bombyx mori: Frequency, Distribution, Mutations, Marker Potential and Their Conservation in Heterologous Species. Genetics, 169 (1). pp. 197-214. ISSN 0016-6731

Tomkowicz, B. and Singh, S.P. and Lai, D. and Singh, Anjali and Mahalingam, S. and Joseph, J. and Srivastava, S. and Srinivasan, A. (2005) Mutational Analysis Reveals an Essential Role for the LXXLL Motif in the Transformation Function of the Human Herpesvirus-8 Oncoprotein, Kaposin. DNA and Cell Biology, 24 (1). pp. 10-20. ISSN 1044-5498

Wise, K.C. and Manna, S.K. and Yamauchi, K. and Ramesh, V. and Wilson, B.L. and Thomas, R.L. and Sarkar, S. and Kulkarni, A.D. and Pellis, N.R. and Ramesh, G.T. (2005) Activation of nuclear transcription factor-κB in mouse brain induced by a simulated microgravity environment. In Vitro Cellular & Developmental Biology - Animal, 41 (3). pp. 118-123. ISSN 1543-706X

Bashyam, M.D. and Hasnain, S.E. (2004) The extracytoplasmic function sigma factors: role in bacterial pathogenesis. Infection, Genetics and Evolution, 4 (4). pp. 301-308. ISSN 1567-1348

Qamra, R. and Mande, S.C. (2004) Crystal Structure of the 65-Kilodalton Heat Shock Protein, Chaperonin 60.2, of Mycobacterium tuberculosis. Journal of Bacteriology, 186 (23). pp. 8105-8113. ISSN 0021-9193

Nagaraju, J. (2004) Spider silks: a possible key to evolution of spiders. Heredity, 93 (5). pp. 520-521. ISSN 0018-067X

Gowrishankar, J. and Harinarayanan, R. (2004) Why is transcription coupled to translation in bacteria? Molecular Microbiology, 54 (3). pp. 598-603. ISSN 0950-382X

Kamal, A. and Ramesh, G. and Srinivas, O. and Ramulu, P. and Laxman, N. and Rehana, T. and Deepak, M. and Achary, M.S. and Nagarajaram, H.A. (2004) Design, synthesis, and evaluation of mixed imine–amine pyrrolobenzodiazepine dimers with efficient DNA binding affinity and potent cytotoxicity. Bioorganic & Medicinal Chemistry, 12 (20). pp. 5427-5436. ISSN 0968-0896

Chakhaiyar, P. and Nagalakshmi, Y. and Aruna, B. and Murthy, K.J.R. and Katoch, V.M. and Hasnain, S.E. (2004) Regions of High Antigenicity within the Hypothetical PPE Major Polymorphic Tandem Repeat Open‐Reading Frame, Rv2608, Show a Differential Humoral Response and a Low T Cell Response in Various Categories of Patients with Tuberculosis. The Journal of Infectious Diseases, 190 (7). pp. 1237-1244. ISSN 0022-1899

Yasodha, R. and Kathirvel, M. and Sumathi, R. and Gurumurthi, K. and Archak, S. and Nagaraju, J. (2004) Genetic analyses of casuarinas using ISSR and FISSR markers. Genetica, 122 (2). pp. 161-72. ISSN 0016-6707

Nagaraja, and Nagaraju, J. and Ranganath, H.A. (2004) Molecular phylogeny of the nasuta subgroup of Drosophila based on 12S rRNA, 16S rRNA and CoI mitochondrial genes, RAPD and ISSR polymorphisms. Genes & Genetic Systems, 79 (5). pp. 293-299. ISSN 1341-7568

Ahmed, N. and Hasnain, S.E. (2004) Genomics of Mycobacterium tuberculosis: old threats & new trends. The Indian Journal of Medical Research, 120 (4). pp. 207-212. ISSN 0971-5916

Nandineni, M.R. and Laishram, R.S. and Gowrishankar, J. (2004) Osmosensitivity Associated with Insertions in argP (iciA) or glnE in Glutamate Synthase-Deficient Mutants of Escherichia coli. Journal of Bacteriology, 186 (19). pp. 6391-6399. ISSN 0021-9193

Reddy, A.B.M. and Kaur, K. and Mandal, A.K. and Panicker, S.G. and Thomas, R. and Hasnain, S.E. and Balasubramanian, D. and Chakrabarti, S. (2004) Mutation spectrum of the CYP1B1 gene in Indian primary congenital glaucoma patients. Molecular vision, 10. pp. 696-702. ISSN 1090-0535

Yellaboina, S. and Ranjan, Sarita and Chakhaiyar, P. and Hasnain, S.E. and Ranjan, Akash (2004) Prediction of DtxR regulon: Identification of binding sites and operons controlled by Diphtheria toxin repressor in Corynebacterium diphtheriae. BMC Microbiology, 4 (1). p. 38. ISSN 1471-2180

King, R.A. and Markov, D. and Sen, Ranjan and Severinov, K. and Weisberg, R.A. (2004) A Conserved Zinc Binding Domain in the Largest Subunit of DNA-dependent RNA Polymerase Modulates Intrinsic Transcription Termination and Antitermination but does not Stabilize the Elongation Complex. Journal of Molecular Biology, 342 (4). pp. 1143-1154. ISSN 0022-2836

Qamra, R. and Srinivas, Volety and Mande, S.C. (2004) Mycobacterium tuberculosis GroEL Homologues Unusually Exist as Lower Oligomers and Retain the Ability to Suppress Aggregation of Substrate Proteins. Journal of Molecular Biology, 342 (2). pp. 605-617. ISSN 0022-2836

Ghosh, S. and Rasheedi, S. and Rahim, S.S. and Banerjee, S. and Choudhary, R.K. and Chakhaiyar, P. and Ehtesham, N.Z. and Mukhopadhyay, Sangita and Hasnain, S.E. (2004) Method for enhancing solubility of the expressed recombinant proteins in Escherichia coli. BioTechniques, 37 (3). 418, 420, 422-433. ISSN 0736-6205

Hasnain, S.E. and Ahmed, N. (2004) Leptospirosis. The Lancet Infectious Diseases, 4 (9). p. 543. ISSN 1473-3099

Khurad, A.M. and Mahulikar, A. and Rathod, M.K. and Rai, M.M. and Kanginakudru, S. and Nagaraju, J. (2004) Vertical transmission of nucleopolyhedrovirus in the silkworm, Bombyx mori L. Journal of Invertebrate Pathology, 87 (1). pp. 8-15. ISSN 0022-2011

Banerjee, S. and Ashok, N. and Raviprasad, P. and Katoch, V.M. and Murthy, K.J.R. and Hasnain, S.E. (2004) Mycobacterium tuberculosis (Mtb) isocitrate dehydrogenases show strong B cell response and distinguish vaccinated controls from TB patients. Proceedings of the National Academy of Sciences, 101 (34). pp. 12652-12657. ISSN 0027-8424

Sarkar, A. and Sreenivasan, Y. and Ramesh, G.T. and Manna, S.K. (2004) Beta-D-Glucoside Suppresses Tumor Necrosis Factor-induced Activation of Nuclear Transcription Factor B but Potentiates Apoptosis. Journal of Biological Chemistry, 279 (32). pp. 33768-33781. ISSN 0021-9258

Bashyam, M.D. and Bashyam, L. and Savithri, G.R. and Gopikrishna, M. and Sangal, V. and Radha Rama Devi, A. (2004) Molecular genetic analyses of beta-thalassemia in South India reveals rare mutations in the beta-globin gene. Journal of Human Genetics, 49 (8). pp. 408-413. ISSN 1434-5161

Choudhary, R.K. and Pullakhandam, R. and Ehtesham, N.Z. and Hasnain, S.E. (2004) Expression and characterization of Rv2430c, a novel immunodominant antigen of Mycobacterium tuberculosis. Protein Expression and Purification, 36 (2). pp. 249-253. ISSN 1046-5928

Vijayachari, P. and Ahmed, N. and Sugunan, A.P. and Ghousunnissa, S. and Rao, K.R. and Hasnain, S.E. and Sehgal, S.C. (2004) Use of Fluorescent Amplified Fragment Length Polymorphism for Molecular Epidemiology of Leptospirosis in India. Journal of Clinical Microbiology, 42 (8). pp. 3575-3580. ISSN 0095-1137

Ahmad, R. and Kamra, A. and Hasnain, S.E. (2004) Fibroin Silk Proteins from the Nonmulberry SilkwormPhilosamia riciniAre Biochemically and Immunochemically Distinct from Those of the Mulberry SilkwormBombyx mori. DNA and Cell Biology, 23 (3). pp. 149-154. ISSN 1044-5498

Yellaboina, S. and Seshadri, J. and Kumar, M.S. and Ranjan, Akash (2004) PredictRegulon: a web server for the prediction of the regulatory protein binding sites and operons in prokaryote genomes. Nucleic Acids Research, 32 (Web Se). W318-W320. ISSN 1362-4962

Nageswara Rao, S. and Muthulakshmi, M. and Kanginakudru, S. and Nagaraju, J. (2004) Phylogenetic relationships of three new microsporidian isolates from the silkworm, Bombyx mori. Journal of Invertebrate Pathology, 86 (3). pp. 87-95. ISSN 0022-2011

Prabhakara, K. and Wyandt, H.E. and Huang, X.L. and Prasad, K.S. and Radha Rama Devi, A. (2004) Recurrent proximal 18p monosomy and 18q trisomy in a family with a maternal pericentric inversion of chromosome 18. Annales de Génétique, 47 (3). pp. 297-303. ISSN 0003-3995

Carroll, I.M. and Ahmed, N. and Beesley, S.M. and Khan, A.A. and Ghousunnissa, S. and Moráin, C.A. and Habibullah, C.M. and Smyth, C.J. (2004) Microevolution between paired antral and paired antrum and corpus Helicobacter pylori isolates recovered from individual patients. Journal of Medical Microbiology, 53 (7). pp. 669-677. ISSN 0022-2615

Ahmed, N. and Alam, M. and Rao, K.R. and Kauser, F. and Kumar, N.A. and Qazi, N.N. and Sangal, V. and Sharma, V.D. and Das, R. and Katoch, V.M. and Murthy, K.J.R. and Suneetha, S. and Sharma, S.K. and Sechi, L.A. and Gilman, R.H. and Hasnain, S.E. (2004) Molecular Genotyping of a Large, Multicentric Collection of Tubercle Bacilli Indicates Geographical Partitioning of Strain Variation and Has Implications for Global Epidemiology of Mycobacterium tuberculosis. Journal of Clinical Microbiology, 42 (7). pp. 3240-3247. ISSN 0095-1137

Chakhaiyar, P. and Hasnain, S.E. (2004) Defining the Mandate of Tuberculosis Research in a Postgenomic Era. Medical Principles and Practice, 13 (4). pp. 177-184. ISSN 1011-7571

Venkaiah, B. and Viswanathan, P. and Habib, S. and Hasnain, S.E. (2004) An Additional Copy of the Homologous Region (hr1) Sequence in theAutographa californicaMultinucleocapsid Polyhedrosis Virus Genome Promotes Hyperexpression of Foreign Genes†. Biochemistry, 43 (25). pp. 8143-8151. ISSN 0006-2960

Metta, M. and Kanginakudru, S. and Gudiseva, N. and Nagaraju, J. (2004) Genetic characterization of the Indian cattle breeds, Ongole and Deoni (Bos indicus), using microsatellite markers – a preliminary study. BMC Genetics, 5 (1). p. 16. ISSN 1471-2156

Mukhopadhyay, Sangita and Srivastava, V.M.L. and Murthy, P.K. and Hasnain, S.E. (2004) Poorer NF-κB signaling by microfilariae in macrophages from BALB/c mice affects their ability to produce cytotoxic levels of nitric oxide to kill microfilariae. FEBS Letters, 567 (2-3). pp. 275-280. ISSN 0014-5793

Carroll, I.M. and Khan, A.A. and Ahmed, N. (2004) Revisiting the pestilence of Helicobacter pylori: insights into geographical genomics and pathogen evolution. Infection, Genetics and Evolution, 4 (2). pp. 81-90. ISSN 1567-1348

Hussain, M.A. and Kauser, F. and Khan, A.A. and Tiwari, S. and Habibullah, C.M. and Ahmed, N. (2004) Implications of Molecular Genotyping of Helicobacter pylori Isolates from Different Human Populations by Genomic Fingerprinting of Enterobacterial Repetitive Intergenic Consensus Regions for Strain Identification and Geographic Evolution. Journal of Clinical Microbiology, 42 (6). pp. 2372-2378. ISSN 0095-1137

Nandineni, M.R. and Gowrishankar, J. (2004) Evidence for an Arginine Exporter Encoded by yggA (argO) That Is Regulated by the LysR-Type Transcriptional Regulator ArgP in Escherichia coli. Journal of Bacteriology, 186 (11). pp. 3539-3546. ISSN 0021-9193

Panicker, S.G. and Mandal, A.K. and Reddy, A.B.M. and Gothwal, V.K. and Hasnain, S.E. (2004) Correlations of Genotype with Phenotype in Indian Patients with Primary Congenital Glaucoma. Investigative Opthalmology & Visual Science, 45 (4). pp. 1149-1156. ISSN 1552-5783

Siddiqi, N. and Das, R. and Pathak, Niteen and Banerjee, S. and Ahmed, N. and Katoch, V.M. and Hasnain, S.E. (2004) Mycobacterium tuberculosis isolate with a distinct genomic identity overexpresses a tap-like efflux pump. Infection, 32 (2). pp. 109-111. ISSN 0300-8126

Sowjanya, A.P. and Ramakrishna, Gayatri (2004) TRendys meeting 2003. Indian Journal of Biochemistry & Biophysics, 41 (2-3). pp. 128-130. ISSN 0301-1208

Akif, M. and Chauhan, R. and Mande, S.C. (2004) Expression, purification, crystallization and preliminary X-ray crystallographic studies of Mycobacterium tuberculosisthioredoxin reductase. Acta Crystallographica Section D Biological Crystallography, 60 (4). pp. 777-779. ISSN 0907-4449

Wise, K. and Manna, S.K. and Barr, J. and Gunasekar, P. and Ramesh, G. (2004) Activation of activator protein-1 DNA binding activity due to low level manganese exposure in pheochromocytoma cells. Toxicology Letters, 147 (3). pp. 237-244. ISSN 0378-4274

Harinarayanan, R. and Gowrishankar, J. (2004) A dnaC Mutation in Escherichia coli That Affects Copy Number of ColE1-Like Plasmids and the PriA-PriB (but Not Rep-PriC) Pathway of Chromosomal Replication Restart. Genetics, 166 (3). pp. 1165-1176. ISSN 0016-6731

Rehman, K.K. and Ayesha, Q. and Khan, A.A. and Ahmed, N. and Habibullah, C.M. (2004) Tyrosine aminotransferase and gamma-glutamyl transferase activity in human fetal hepatocyte primary cultures under proliferative conditions. Cell Biochemistry and Function, 22 (2). pp. 89-96. ISSN 0263-6484

Vardhini, D. and Suneetha, S. and Ahmed, N. and Joshi, D.S.M. and Karuna, S. and Magee, X. and Vijayalakshmi, D.S.R. and Sridhar, V. and Karunakar, K.V. and Archelos, J.J. and Suneetha, L.M. (2004) Comparative proteomics of the Mycobacterium leprae binding protein myelin P0: its implication in leprosy and other neurodegenerative diseases. Infection, Genetics and Evolution, 4 (1). pp. 21-28. ISSN 1567-1348

Radha Rama Devi, A. and Govindaiah, V. and Ramakrishna, Gayatri and Naushad, S.M. (2004) Prevalence of methylene tetrahydrofolate reductase polymorphism in South Indian population. Current Science, 86 (3). pp. 440-443. ISSN 0011-3891

Radha Rama Devi, A. and Naushad, S.M. (2004) Newborn screening in India. The Indian Journal of Pediatrics, 71 (2). pp. 157-160. ISSN 0019-5456

Prabhakara, K. and Radha Rama Devi, A. (2004) Premature centromere division versus C-anaphases in cultures: Need for consensus and guidelines. American Journal of Medical Genetics, 124A (3). p. 331. ISSN 0148-7299

Awasthi, A.K. and Nagaraja, G.M. and Naik, G.V. and Kanginakudru, S. and Thangavelu, K. and Nagaraju, J. (2004) Genetic diversity and relationships in mulberry (genus Morus) as revealed by RAPD and ISSR marker assays. BMC Genetics, 5 (1). pp. 1-9. ISSN 1471-2156

Majeed, A.A. and Ahmed, N. and Rao, K.R. and Ghousunnissa, S. and Kauser, F. and Bose, B. and Nagarajaram, H.A. and Katoch, V.M. and Cousins, D.V. and Sechi, L.A. and Gilman, R.H. and Hasnain, S.E. (2004) AmpliBASE MTTM: a Mycobacterium tuberculosis diversity knowledgebase. Bioinformatics, 20 (6). pp. 989-992. ISSN 1367-4803

Kauser, F. and Khan, A.A. and Hussain, M.A. and Carroll, I.M. and Ahmad, N. and Tiwari, S. and Shouche, Y. and Das, B. and Alam, M. and Ali, S.M. and Habibullah, C.M. and Sierra, R. and Megraud, F. and Sechi, L.A. and Ahmed, N. (2004) The cag Pathogenicity Island of Helicobacter pylori Is Disrupted in the Majority of Patient Isolates from Different Human Populations. Journal of Clinical Microbiology, 42 (11). pp. 5302-5308. ISSN 0095-1137

Felix, K. and Wise, K. and Manna, S.K. and Yamauchi, K. and Wilson, B.L. and Thomas, R.L. and Kulkarni, A.D. and Pellis, N.R. and Ramesh, G.T. (2004) Altered cytokine expression in tissues of mice subjected to simulated microgravity. Molecular and Cellular Biochemistry, 266 (1/2). pp. 79-85. ISSN 0300-8177

Shanti, M.B. and Manjula Reddy, and Gowrishankar, J. (2004) Distinct Signatures for Mutator Sensitivity of lacZ Reversions and for the Spectrum of lacI/lacO Forward Mutations on the Chromosome of Nondividing Escherichia coli. Genetics, 166 (2). pp. 681-692. ISSN 0016-6731

Prabhakara, K. and Angalena, R. and Radha Rama Devi, A. (2004) Familial (9;11)(p22;p15.5)pat translocation and XX sex reversal in a phenotypic boy with cryptorchidism and delayed development. Genetic Counseling (Geneva, Switzerland), 15 (1). pp. 37-41. ISSN 1015-8146

Aparna, G. and Bhuyan, A.K. and Sahdev, S. and Hasnain, S.E. and Kaufman, R.J. and Ramaiah, K.V.A. (2003) Stress-Induced Apoptosis in Spodoptera frugiperda(Sf9) Cells: Baculovirus p35 Mitigates eIF2α Phosphorylation. Biochemistry, 42 (51). pp. 15352-15360. ISSN 0006-2960

Ahmed, N. and Khan, A.A. and Alvi, A. and Tiwari, S. and Jyothirmayee, C.S. and Kauser, S. and Ali, M. and Habibullah, C.M. (2003) Genomic analysis of Helicobacter pylori from Andhra Pradesh, South India: Molecular evidence for three major genetic clusters. Current Science, 85 (11). pp. 1579-1586. ISSN 0011-3891

Ali, S. and Hasnain, S.E. (2003) Genomics of the human Y-chromosome: 1. Association with male infertility. Gene, 321. pp. 25-37. ISSN 0378-1119

Sreenivasan, Y. and Sarkar, A. and Manna, S.K. (2003) Oleandrin suppresses activation of nuclear transcription factor-κB and activator protein-1 and potentiates apoptosis induced by ceramide. Biochemical Pharmacology, 66 (11). pp. 2223-2239. ISSN 0006-2952

Mandal, A.K. and Prabhakara, K. and Reddy, A.B.M. and Radha Rama Devi, A. and Panicker, S.G. (2003) Congenital glaucoma associated with 22p+ variant in a dysmorphic child. Indian Journal of Ophthalmology, 51 (4). pp. 355-7. ISSN 0301-4738

Carroll, I.M. and Ahmed, N. and Beesley, S.M. and Khan, A.A. and Ghousunnissa, S. and Morain, C.A.O. and Smyth, C.J. (2003) Fine-Structure Molecular Typing of Irish Helicobacter pylori Isolates and Their Genetic Relatedness to Strains from Four Different Continents. Journal of Clinical Microbiology, 41 (12). pp. 5755-5759. ISSN 0095-1137

Shiras, A. and Bhosale, A. and Shepal, V. and Shukla, R. and Baburao, V.S. and Prabhakara, K. and Shastry, P. (2003) A unique model system for tumor progression in GBM comprising two developed human neuro-epithelial cell lines with differential transforming potential and coexpressing neuronal and glial markers. Neoplasia , 5 (6). pp. 520-532. ISSN 1522-8002

Choudhary, R.K. and Mukhopadhyay, Sangita and Chakhaiyar, P. and Sharma, N. and Murthy, K.J.R. and Katoch, V.M. and Hasnain, S.E. (2003) PPE Antigen Rv2430c of Mycobacterium tuberculosis Induces a Strong B-Cell Response. Infection and Immunity, 71 (11). pp. 6338-6343. ISSN 0019-9567

Sarkar, A. and Sreenivasan, Y. and Manna, S.K. (2003) alpha-Melanocyte-stimulating hormone inhibits lipopolysaccharide-induced biological responses by downregulating CD14 from macrophages. FEBS Letters, 553 (3). pp. 286-294. ISSN 0014-5793

Viswanathan, P. and Venkaiah, B. and Kumar, M.S. and Rasheedi, S. and Vrati, S. and Bashyam, M.D. and Hasnain, S.E. (2003) The Homologous Region Sequence (hr1) of Autographa californica Multinucleocapsid Polyhedrosis Virus Can Enhance Transcription from Non-baculoviral Promoters in Mammalian Cells. Journal of Biological Chemistry, 278 (52). pp. 52564-52571. ISSN 0021-9258

Reddy, A.B.M. and Panicker, S.G. and Mandal, A.K. and Hasnain, S.E. and Balasubramanian, D. (2003) Identification of R368H as a PredominantCYP1B1Allele Causing Primary Congenital Glaucoma in Indian Patients. Investigative Opthalmology & Visual Science, 44 (10). p. 4200. ISSN 1552-5783

Aruna, B. and Ghosh, S. and Singh, A.K. and Mande, S.C. and Srinivas, Volety and Chauhan, R. and Ehtesham, N.Z. (2003) Human Recombinant Resistin Protein Displays a Tendency To Aggregate by Forming Intermolecular Disulfide Linkages†. Biochemistry, 42 (36). pp. 10554-10559. ISSN 0006-2960

Harinarayanan, R. and Gowrishankar, J. (2003) Host Factor Titration by Chromosomal R-loops as a Mechanism for Runaway Plasmid Replication in Transcription Termination-defective Mutants of Escherichia coli. Journal of Molecular Biology, 332 (1). pp. 31-46. ISSN 0022-2836

Cousins, D.V. and Bastida, R. and Cataldi, A. and Quse, V. and Redrobe, S. and Dow, S. and Duignan, P. and Murray, A. and Dupont, C. and Ahmed, N. and Collins, D.M. and Butler, W.R. and Dawson, D. and Rodríguez, D. and Loureiro, J. and Romano, M.I. and Alito, A. and Zumarraga, M. and Bernardelli, A. (2003) Tuberculosis in seals caused by a novel member of the Mycobacterium tuberculosis complex: Mycobacterium pinnipedii sp. nov. International Journal of Systematic and Evolutionary Microbiology, 53 (5). pp. 1305-1314. ISSN 1466-5026

Rajendra Kumar, P. and Singhal, P.K. and Vinod, S.S. and Mahalingam, S. (2003) A Non-canonical Transferable Signal Mediates Nuclear Import of Simian Immunodeficiency Virus Vpx Protein. Journal of Molecular Biology, 331 (5). pp. 1141-1156. ISSN 0022-2836

Sarkar, A. and Sreenivasan, Y. and Manna, S.K. (2003) alpha-Melanocyte-stimulating hormone induces cell death in mast cells: involvement of NF-kappaB. FEBS Letters, 549 (1-3). pp. 87-93. ISSN 00145793

Sahdev, S. and Taneja, T.K. and Mohan, M. and Sah, N.K. and Khar, A.K. and Hasnain, S.E. and Athar, M. (2003) Baculoviral p35 inhibits oxidant-induced activation of mitochondrial apoptotic pathway. Biochemical and Biophysical Research Communications, 307 (3). pp. 483-490. ISSN .0006-291X

Sreenivasan, Y. and Sarkar, A. and Manna, S.K. (2003) Mechanism of cytosine arabinoside-mediated apoptosis: role of Rel A (p65) dephosphorylation. Oncogene, 22 (28). pp. 4356-69. ISSN 0950-9232

Prasad, M.D. and Han, S.J. and Nagaraju, J. and Lee, W.J. and Brey, P.T. (2003) Cloning and characterization of an eukaryotic initiation factor-2α kinase from the silkworm, Bombyx mori. Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression, 1628 (1). pp. 56-63. ISSN 0167-4781

Priyadarshini, P. and Murthy, B.S. and Nagaraju, J. and Singh, Lalji (2003) A GATA-binding protein expressed predominantly in the pupal ovary of the silkworm, Bombyx mori. Insect Biochemistry and Molecular Biology, 33 (2). pp. 185-195. ISSN 0965-1748

Prasad, M.D. and Nagaraju, J. (2003) A comparative phylogenetic analysis of full-length mariner elements isolated from the Indian tasar silkmoth, Antheraea mylitta (Lepidoptera: saturniidae). Journal of Biosciences, 28 (4). pp. 443-53. ISSN 0250-5991

Mohan, M. and Taneja, T.K. and Sahdev, S. and Krishnaveni, M. and Begum, R. and Athar, M. and Sah, N.K. and Hasnain, S.E. (2003) Antioxidants prevent UV-induced apoptosis by inhibiting mitochondrial cytochrome c release and caspase activation in Spodoptera frugiperda (Sf9) cells. Cell Biology International, 27 (6). pp. 483-490. ISSN 1065-6995

Bashyam, M.D. (2003) Prokaryotic Genomics (Michel Blot ed.). Current Science, 84 (10). pp. 1366-1367. ISSN 0011-3891

Bashyam, M.D. and Mukhopadhyay, Sangita (2003) [Book Review] 1. Status of Tuberculosis in India 2. Trends in Malaria and Vaccine Research: The Current Indian Scenario. Infection, Genetics and Evolution, 3 (1). pp. 75-77. ISSN 15671348

Hasnain, S.E. and Begum, R. and Ramaiah, K.V.A. and Sahdev, S. and Shajil, E.M. and Taneja, T.K. and Mohan, M. and Athar, M. and Sah, N.K. and Krishnaveni, M. (2003) Host-pathogen interactions during apoptosis. Journal of Biosciences, 28 (3). pp. 349-358. ISSN 0250-5991

Ahmed, N. and Caviedes, L. and Alam, M. and Rao, K.R. and Sangal, V. and Sheen, P. and Gilman, R.H. and Hasnain, S.E. (2003) Distinctiveness of Mycobacterium tuberculosis Genotypes from Human Immunodeficiency Virus Type 1-Seropositive and -Seronegative Patients in Lima, Peru. Journal of Clinical Microbiology, 41 (4). pp. 1712-1716. ISSN 0095-1137

Gowrishankar, J. and Yamamoto, K. and Subbarayan, P.R. and Ishihama, A. (2003) In vitro properties of RpoS ( S) mutants of Escherichia coli with postulated N-terminal subregion 1.1 or C-terminal region 4 deleted. Journal of Bacteriology, 185 (8). pp. 2673-2679. ISSN 0021-9193

Ghosh, S. and Singh, A.K. and Aruna, B. and Mukhopadhyay, Sangita and Ehtesham, N.Z. (2003) The genomic organization of mouse resistin reveals major differences from the human resistin: functional implications. Gene, 305 (1). pp. 27-34. ISSN 0378-1119

Bashyam, M.D. and Savithri, G.R. and Kumar, M.S. and Narasimhan, C. and Pratibha, N. (2003) Molecular genetics of familial hypertrophic cardiomyopathy (FHC). Journal of Human Genetics, 48 (2). pp. 55-64. ISSN 1434-5161

Bashyam, M.D. and Hasnain, S.E. (2003) The human genome sequence: impact on health care. Indian Journal of Medical Research, 117. pp. 43-65. ISSN 0971-5916

Ahmed, N. and Alam, M. and Majeed, A.A. and Rahman, S.A. and Cataldi, A. and Cousins, D. and Hasnain, S.E. (2003) Genome sequence based, comparative analysis of the fluorescent amplified fragment length polymorphisms (FAFLP) of tubercle bacilli from seals provides molecular evidence for a new species within the Mycobacterium tuberculosis complex. Infection, Genetics and Evolution, 2 (3). pp. 193-199. ISSN 1567-1348

Sreenu, V.B. and Alevoor, V. and Nagaraju, J. and Nagarajaram, H.A. (2003) MICdb: database of prokaryotic microsatellites. Nucleic Acids Research, 31 (1). pp. 106-108. ISSN 1362-4962

Mallikarjuna Rao, G.N. and Hussain, T. and Geetha Devi, N. and Jain, S. and Chandak, G.R. and Ananda Raj, M.P. (2003) Dystrophin gene deletions in South Indian Duchenne muscular dystrophy patients. Indian Journal of Medical Sciences, 57 (1). pp. 1-6. ISSN 0019-5359

Sreenu, V.B. and Ranjitkumar, G.K. and Swaminathan, S. and Priya, S. and Bose, B. and Pavan, M.N. and Thanu, G. and Nagaraju, J. and Nagarajaram, H.A. (2003) MICAS: a fully automated web server for microsatellite extraction and analysis from prokaryote and viral genomic sequences. Applied Bioinformatics, 2 (3). pp. 165-168. ISSN 1175-5636

Terwilliger, T.C. and Park, M.S. and Waldo, G.S. and Berendzen, J. and Hung, L.-W and Kim, C.-Y and Smith, C.V. and Sacchettini, J. and Bellinzoni, M. and Bossi, R. and De Rossi, E. and Mattevi, A. and Milano, A. and Riccardi, G. and Rizzi, M. and Roberts, M.M. and Coker, A.R. and Fossati, G. and Mascagni, P. and Coates, A.R.M. and Wood, S.P. and Goulding, C.W. and Apostol, M. and Anderson, D.H. and Gill, H.S. and Eisenberg, D.S. and Taneja, B. and Mande, S.C. and Pohl, E. and Lamzin, V. and Tucker, P. and Wilmanns, M. and Colovos, C. and Meyer-Klaucke, W. and Munro, A.W. and McLean, K.J. and Marshall, K.R. and Leys, D. and Yang, J.K. and Yoon, H.-J. and Lee, B.I. and Lee, M.G. and Kwak, J.E. and Han, B.W. and Lee, J.Y. and Baek, S.-H. and Suh, S.W. and Komen, M.M. and Arcus, V.L. and Baker, E.N. and Lott, J.S. and Jacobs, W. and Alber, T. and Rupp, B. (2003) The TB structural genomics consortium: a resource for Mycobacterium tuberculosis biology. Tuberculosis, 83 (4). pp. 223-249. ISSN 1472-9792

Sen, Ranjan and Dasgupta, Dipak (2003) Simple Fluorescence Assays Probing Conformational Changes of Escherichia coli RNA Polymerase During Transcription Initiation. Methods in Enzymology, 370. pp. 598-605. ISSN 0076-6879

Rekha, T. and Khan, A.A. and Alavi, A. and Hussain, M.A. and Habeeb, A. and Ahmed, N. and Habibullah, C.M. (2003) Genetic fine structure analysis of Helicobacter pylori isolates before and after treatment. Indian Journal of Medical Microbiology, 21 (3). pp. 166-171.

King, R.A. and Sen, Ranjan and Weisberg, R.A. (2003) Using a lac repressor roadblock to analyze the E. coli transcription elongation complex. Methods in Enzymology, 371. pp. 207-18. ISSN 0076-6879

Hasnain, S.E. (2003) Molecular epidemiology of infectious diseases: a case for increased surveillance. Bulletin of the World Health Organization, 81 (7). p. 474. ISSN 0042-9686

Qamra, R. and Taneja, B. and Mande, S.C. (2002) Identification of conserved residue patterns in small beta-barrel proteins. Protein Engineering, 15 (12). pp. 967-77. ISSN 0269-2139

Panicker, S.G. and Sampath, S. and Mandal, A.K. and Reddy, A.B.M. and Ahmed, N. and Hasnain, S.E. (2002) Novel mutation in FOXC1 wing region causing Axenfeld-Rieger anomaly. Investigative Ophthalmology & Visual Science, 43 (12). pp. 3613-3616. ISSN 0146-0404

Eswar, N. and Nagarajaram, H.A. and Ramakrishnan, C. and Srinivasan, N. (2002) Influence of solvent molecules on the stereochemical code of glycyl residues in proteins. Proteins: Structure, Function, and Genetics, 49 (3). pp. 326-334. ISSN 0887-3585

Prabhakara, K. and Dutta, Usha and Radha Rama Devi, A. (2002) A partial 15q22 trisomy arising due to segregation of maternal 10;15 reciprocal translocation. Indian Pediatrics, 39 (11). pp. 1050-1054. ISSN 0019-6061

Kamal, A. and Ramesh, G. and Laxman, N. and Ramulu, P. and Srinivas, O. and Neelima, K. and Kondapi, A.K. and Sreenu, V.B. and Nagarajaram, H.A. (2002) Design, Synthesis, and Evaluation of New Noncross-Linking Pyrrolobenzodiazepine Dimers with Efficient DNA Binding Ability and Potent Antitumor Activity. Journal of Medicinal Chemistry, 45 (21). pp. 4679-4688. ISSN 0022-2623

Chauhan, R. and Mande, S.C. (2002) Site-directed mutagenesis reveals a novel catalytic mechanism of Mycobacterium tuberculosis alkylhydroperoxidase C. Biochemical Journal, 367 (Pt 1). pp. 255-61. ISSN 0264-6021

Prasad, M.D. and Nurminsky, D.L. and Nagaraju, J. (2002) Characterization and molecular phylogenetic analysis of mariner elements from wild and domesticated species of silkmoths. Molecular Phylogenetics and Evolution, 25 (1). pp. 210-17. ISSN 1055-7903

Bashyam, M.D. (2002) Microarrays for the Neurosciences -- An Essential Guide. Current Science, 83 (5). pp. 649-650. ISSN 0011-3891

Nagaraju, J. and Goldsmith, M.R. (2002) Silkworm genomics - progress and prospects. Current Science, 83 (4). pp. 415-425. ISSN 0011-3891

Nagaraju, J. (2002) Application of genetic principles for improving silk production. Current Science, 83 (4). pp. 409-414. ISSN 0011-3891

Ghosh, S. and Parvez , M.K. and Banerjee, K. and Sarin, S.K. and Hasnain, S.E. (2002) Baculovirus as Mammalian Cell Expression Vector for Gene Therapy: An Emerging Strategy. Molecular Therapy, 6 (1). pp. 5-11. ISSN 1525-0016

Rajkumari, K. and Gowrishankar, J. (2002) An N-Terminally Truncated RpoS ( S) Protein in Escherichia coli Is Active In Vivo and Exhibits Normal Environmental Regulation Even in the Absence of rpoS Transcriptional and Translational Control Signals. Journal of Bacteriology, 184 (12). pp. 3167-3175. ISSN 0021-9193

Goulding, C.W. and Apostol, M. and Anderson, D.H. and Gill, H.S. and Smith, C.V. and Kuo, M.R. and Yang, J.K. and Waldo, G.S. and Suh, S.W. and Chauhan, R. and Kale, A. and Bachhawat, N. and Mande, S.C. and Johnston, J.M. and Lott, J.S. and Baker, E.N. and Arcus, V.L. and Leys, D. and McLean, K.J. and Munro, A.W. and Berendzen, J. and Sharma, V. and Park, M.S. and Eisenberg, D.A. and Sacchettini, J. and Alber, T. and Rupp, B. and Jacobs, W. and Terwilliger, T.C. (2002) The TB structural genomics consortium: providing a structural foundation for drug discovery. Current Drug Targets: Infectious Disorders, 2 (2). pp. 121-141. ISSN 1568-0053

Panicker, S.G. and Reddy, A.B.M. and Mandal, A.K. and Ahmed, N. and Nagarajaram, H.A. and Hasnain, S.E. and Balasubramanian, D. (2002) Identification of novel mutations causing familial primary congenital glaucoma in Indian pedigrees. Investigative Ophthalmology & Visual Science, 43 (5). pp. 1358-66. ISSN 0146-0404

Ahmed, N. and Bal, A. and Khan, A.A. and Alam, M. and Kagal, A. and Arjunwadkar, V. and Rajput, A. and Majeed, A.A. and Rahman, S.A. and Banerjee, S. (2002) Whole genome fingerprinting and genotyping of multiple drug resistant (MDR) isolates of Pseudomonas aeruginosa from endophthalmitis patients in India. Infection, Genetics and Evolution, 1 (3). pp. 237-242. ISSN 15671348

Nagaraju, J. and Kathirvel, M. and Kumar, R.R. and Siddiq, E.A. and Hasnain, S.E. (2002) Genetic analysis of traditional and evolved Basmati and non-Basmati rice varieties by using fluorescence-based ISSR-PCR and SSR markers. Proceedings of the National Academy of Sciences, 99 (9). pp. 5836-5841. ISSN 0027-8424

Kazim, S.N. and Wakil, S.M. and Khan, L.A. and Hasnain, S.E. and Sarin, S.K. (2002) Vertical transmission of hepatitis B virus despite maternal lamivudine therapy. Lancet, 359 (9316). pp. 1488-9. ISSN 0140-6736

Bashyam, M.D. (2002) Understanding cancer metastasis. Cancer, 94 (6). pp. 1821-1829. ISSN 0008-543X

Suvas, S. and Singh, V. and Sahdev, S. and Vohra, H. and Agrewala, J.N. (2002) Distinct role of CD80 and CD86 in the regulation of the activation of B cell and B cell lymphoma. The Journal of Biological Chemistry, 277 (10). pp. 7766-75. ISSN 0021-9258

Siddiqi, N. and Shamim, M. and Hussain, S. and Choudhary, R.K. and Ahmed, N. and Prachee, and Banerjee, S. and Savithri, G.R. and Alam, M. and Pathak, Niteen and Amin, A. and Hanief, M. and Katoch, V.M. and Sharma, S.K. and Hasnain, S.E. (2002) Molecular characterization of multidrug-resistant isolates of Mycobacterium tuberculosis from patients in North India. Antimicrobial Agents and Chemotherapy, 46 (2). pp. 443-50. ISSN 0066-4804

Taneja, B. and Mande, S.C. (2002) Structure ofMycobacterium tuberculosischaperonin-10 at 3.5 Å resolution. Acta Crystallographica Section D Biological Crystallography, 58 (2). pp. 260-266. ISSN 0907-4449

Ali, S. and Hasnain, S.E. (2002) Molecular dissection of the human Y-chromosome. Gene, 283 (1-2). pp. 1-10. ISSN 0378-1119

Panneerchelvam, S. and Vanaja, N. and Goud, Ch.V. and Sheeba, A. and Rao, G.V. and Damodaran, C. (2002) Allele frequency distribution for nine fluorescent based STR loci in Tamil population (South India). Journal of Forensic Sciences, 47 (1). pp. 226-7. ISSN 0022-1198

Radha Rama Devi, A. and Prabhakara, K. and Dutta, Usha (2002) Familial (11;21)(p13;q22)pat balanced reciprocal translocation in a female child with regression of milestones. Annales de Génétique, 45 (1). pp. 13-5. ISSN 0003-3995

Radha Rama Devi, A. and Naik, U. and Dutta, Usha and Srikanth, and Prabhakara, K. (2002) De novo pericentric inversion of chromosome 4, inv(4)(p16q12) in a boy with piebaldism and mental retardation. American Journal of Medical Genetics A, 113 (2). pp. 190-192. ISSN 0148-7299

Nagaraju, J. and Kathirvel, M. and Subbaiah, E.V. and Muthulakshmi, M. and Kumar, L.D. (2002) FISSR-PCR: a simple and sensitive assay for highthroughput genotyping and genetic mapping. Molecular and Cellular Probes, 16 (1). pp. 67-72. ISSN 0890-8508

Wakil, S.M. and Kazim, S.N. and Khan, L.A. and Raisuddin, S. and Parvez, M.K. and Guptan, R.C. and Thakur, V. and Hasnain, S.E. and Sarin, S.K. (2002) Prevalence and profile of mutations associated with lamivudine therapy in Indian patients with chronic hepatitis B in the surface and polymerase genes of hepatitis B virus. Journal of Medical Virology, 1 (2). p. 62. ISSN 0146-6615

Ata-ur-Rasheed, M. and Vemuganti, G.K. and Honavar, S.G. and Ahmed, N. and Hasnain, S.E. and Kannabiran, C. (2002) Mutational analysis of the RB1 gene in Indian patients with retinoblastoma. Ophthalmic Genetics, 23 (2). pp. 121-128. ISSN 1381-6810

Parvez, M.K. and Thakur, V. and Kazim, S.N. and Guptan, R.C. and Hasnain, S.E. and Sarin, S.K. (2001) Base-pair alterations in the epsilon-lower stem due to a novel double substitution in the precore gene of HBV-e negative variant were recovered by secondary mutations. Virus Genes, 23 (3). pp. 315-320. ISSN 0920-8569

Sai Sree, L. and Manjula Reddy, and Gowrishankar, J. (2001) IS186 insertion at a hot spot in the lon promoter as a basis for lon protease deficiency of Escherichia coli B: identification of a consensus target sequence for IS186 transposition. Journal of Bacteriology, 183 (23). pp. 6943-6. ISSN 0021-9193

Hasnain, S.E. (2001) MEEGID-V: Fifth international meeting on molecular epidemiology and evolutionary genetics in infectious diseases. Infection, Genetics and Evolution, 1 (2). pp. 167-170.

Ramana, G.V. and Vasanthi, A. and Khaja, M. and Su, B. and Govindaiah, V. and Jin, L. and Singh, Lalji and Chakraborty, R. (2001) Distribution of HIV-1 resistance-conferring polymorphic alleles SDF-1-3′A, CCR2-64I and CCR5-. Journal of Genetics, 80 (3). pp. 137-140. ISSN 0973-7731

Jain, D. and Nair, D.T. and Swaminathan, G.J. and Abraham, E.G. and Nagaraju, J. and Salunke, D.M. (2001) Structure of the induced antibacterial protein from tasar silkworm, Antheraea mylitta. Implications to molecular evolution. The Journal of Biological Chemistry, 276 (44). pp. 41377-82. ISSN 0021-9258

Rajkumari, K. and Gowrishankar, J. (2001) In Vivo Expression from the RpoS-Dependent P1 Promoter of the Osmotically Regulated proU Operon in Escherichia coli and Salmonella enterica Serovar Typhimurium: Activation by rho and hns Mutations and by Cold Stress. Journal of Bacteriology, 183 (22). pp. 6543-6550. ISSN 0021-9193

Vanitharani, R. and Mahalingam, S. and Rafaeli, Y. and Singh, S.P. and Srinivasan, A. and Weiner, D.B. and Ayyavoo, V. (2001) HIV-1 Vpr Transactivates LTR-Directed Expression through Sequences Present within −278 to −176 and Increases Virus Replication in Vitro. Virology, 289 (2). pp. 334-342. ISSN 0042-6822

Ramachandran, A. and Bashyam, M.D. and Viswanathan, P. and Ghosh, S. and Kumar, M.S. and Hasnain, S.E. (2001) The bountiful and baffling baculovirus: The story of polyhedrin transcription. Current Science, 81 (8). pp. 998-1010. ISSN 0011-3891

Nagaraju, J. (2001) Identification of a gene associated with Bt resistance in the lepidopteran host, Heliothis virescens and its implications in Bt transgenic based pest control. Current Science , 81 (7). pp. 746-747. ISSN 0011-3891

Kohli, A. and Gupta, V. and Krishnamurthy, S. and Hasnain, S.E. and Prasad, R. (2001) Specificity of drug transport mediated by CaMDR1: a major facilitator of Candida albicans. Journal of Biosciences, 26 (3). pp. 333-9. ISSN 0250-5991

Ramachandran, A. and Jain, A. and Arora, P. and Bashyam, M.D. and Chatterjee, U. and Ghosh, S. and Parnaik, V.K. and Hasnain, S.E. (2001) Novel Sp Family-like Transcription Factors Are Present in Adult Insect Cells and Are Involved in Transcription from the Polyhedrin Gene Initiator Promoter. Journal of Biological Chemistry, 276 (26). pp. 23440-23449. ISSN 0021-9258

Srinivas, V.R. and Bachhawat-Sikder, K. and Habib, S. and Hasnain, S.E. and Surolia, A. (2001) Expression of winged bean basic agglutinin in Spodoptera frugiperda insect cell expression system. Bioscience Reports, 21 (3). pp. 361-367. ISSN 0144-8463

Sardesai, A.A. and Gowrishankar, J. (2001) Improvement in K+-limited growth rate associated with expression of the N-terminal fragment of one subunit (KdpA) of the multisubunit Kdp transporter in Escherichia coli. Journal of Bacteriology, 183 (11). pp. 3515-3520. ISSN 0021-9193

Nagaraju, J. and Reddy, K.D. and Nagaraja, G.M. and Sethuraman, B.N. (2001) Comparison of multilocus RFLPs and PCR-based marker systems for genetic analysis of the silkworm, Bombyx mori. Heredity, 86 (Pt 5). pp. 588-597. ISSN 0018-067X

Guruprasad, K. and Prasad, M.S. and Kumar, G.R. (2001) Analysis of gammabeta, betagamma, gammagamma, betabeta continuous turns in proteins. Journal of Peptide Research, 57 (4). pp. 292-300. ISSN 1397-002X

Kumar, L.D. and Kathirvel, M. and Rao, G.V. and Nagaraju, J. (2001) DNA profiling of disputed chilli samples (Capsicum annum) using ISSR-PCR and FISSR-PCR marker assays. Forensic science international, 116 (1). pp. 63-68. ISSN 0379-0738

Sardesai, A.A. and Gowrishankar, J. (2001) trans-acting mutations in loci other than kdpDE that affect kdp operon regulation in Escherichia coli: effects of cytoplasmic thiol oxidation status and nucleoid protein H-NS on kdp expression. Journal of Bacteriology, 183 (1). pp. 86-93. ISSN 0021-9193

Siddiqi, N. and Shamim, M. and Amin, A. and Chauhan, D.S. and Das, R. and Srivastava, K. and Singh, D. and Sharma, V.D. and Katoch, V.M. and Sharma, S.K. and Hanief, M. and Hasnain, S.E. (2001) Typing of drug resistant isolates of Mycobacterium tuberculosis from India using the IS6110 element reveals substantive polymorphism. Infection, Genetics and Evolution, 1 (2). pp. 109-116. ISSN 1567-1348

Kumar, R.R. and Meenakshi, A. and Sivakumar, N. (2001) Enzyme immunoassay of human epidermal growth factor receptor (hEGFR). Human Antibodies, 10 (3-4). pp. 143-147. ISSN 1093-2607

Guruprasad, K. and Pavan, M.N. and Rajkumar, S. and Swaminathan, S. (2000) Isolated and multiple b-turns with proline in the third position. Current Science, 79 (7). pp. 992-994. ISSN 0011-3891

Guruprasad, K. and Prasad, M.S. and Kumar, G.R. (2000) Analysis of gammabeta, betagamma, gammagamma, betabeta multiple turns in proteins. Journal of Peptide Research, 56 (4). pp. 250-263. ISSN 1397-002X

Sudhakar, A. and Ramachandran, A. and Ghosh, S. and Hasnain, S.E. and Kaufman, R.J. and Ramaiah, K.V.A. (2000) Phosphorylation of Serine 51 in Initiation Factor 2α (eIF2α) Promotes Complex Formation between eIF2α(P) and eIF2B and Causes Inhibition in the Guanine Nucleotide Exchange Activity of eIF2B†. Biochemistry, 39 (42). pp. 12929-12938. ISSN 0006-2960

Raman, L.A. and Siddiqi, N. and Shamim, M. and Deb, M. and Mehta, G. and Hasnain, S.E. (2000) Molecular characterization of Mycobacterium abscessus strains isolated from a hospital outbreak. Emerging Infectious Diseases, 6 (5). pp. 561-562. ISSN 1080-6040

Kapoor, D. and Guptan, R.C. and Wakil, S.M. and Kazim, S.N. and Kaul, R. and Agarwal, S.R. and Raisuddin, S. and Hasnain, S.E. and Sarin, S.K. (2000) Beneficial effects of lamivudine in hepatitis B virus-related decompensated cirrhosis. Journal of Hepatology, 33 (2). pp. 308-312. ISSN 0168-8278

Ramana, G.V. and Chandak, G.R. and Singh, Lalji (2000) Sickle cell gene haplotypes in Relli and Thurpu Kapu populations of Andhra Pradesh. Human Biology, 72 (3). pp. 535-540. ISSN 0018-7143

Shi, Ya Ping and Das, P. and Holloway, B. and Udhayakumar, V. and Tongren, J.E. and Candal, F. and Biswas, S. and Ahmad, S.R. and Hasnain, S.E. and Lal, A.A. (2000) Development, expression, and murine testing of a multistage Plasmodium falciparum malaria vaccine candidate. Vaccine, 18 (25). pp. 2902-2914. ISSN 0264-410X

Habib, S. and Hasnain, S.E. (2000) Differential Activity of Two Non-hr Origins during Replication of the Baculovirus Autographa californica Nuclear Polyhedrosis Virus Genome. Journal of Virology, 74 (11). pp. 5182-5189. ISSN 0022-538X

Guruprasad, K. and Rajkumar, S. (2000) Beta-and gamma-turns in proteins revisited: a new set of amino acid turn-type dependent positional preferences and potentials. Journal of Biosciences, 25 (2). pp. 143-56. ISSN 0250-5991

Shah, N.K. and Taneja , T.K. and Hasnain, S.E. (2000) Mitochondria can power cells to life and death. Resonance , 5 (4). pp. 74-84. ISSN 0971-8044

Guruprasad, K. and Prasad, M.S. and Kumar, G.R. (2000) Database of Structural Motifs in Proteins. Bioinformatics, 16 (4). pp. 372-375. ISSN 1367-4803

Nagaraju, J. (2000) Recent advances in the silkworm, Bombyx mori. Current Science , 78 (2). pp. 151-161. ISSN 0011-3891

Rao, G.V. and Hasnain, S.E. (2000) The Centre for DNA Fingerprinting and Diagnostics: A synthesis of quality service and globally competitive science. Asia Pacific Journal of Biotechnology , 4 (6). pp. 114-117. ISSN 0219-0303

Bashyam, M.D. and Ghosh, S. and Ramachandran, A. and Viswanathan, P. and Hasnain, S.E. (2000) Multiple regulatory circuits for transcription from the polyhedrin gene promoter of the Autographa californica multiple nucleocapsid nuclear polyhedrosis virus. Proceedings of the Indian Natlonal Science Academy (PINSA), 66B (2-3). pp. 83-95. ISSN 0369-8211

Reddy, K.D. and Nagaraju, J. and Abraham, E.G. (1999) Genetic characterization of the silkworm Bombyx mori by simple sequence repeat (SSR)-anchored PCR. Heredity, 83 (6). pp. 681-687. ISSN 0018-067X

Reddy, K.D. and Abraham, E.G. and Nagaraju, J. (1999) Microsatellites in the silkworm, Bombyx mori: abundance, polymorphism, and strain characterization. Genome, 42 (6). pp. 1057-65. ISSN 0831-2796

Sudhakar, A. and Krishnamoorthy, T. and Jain, A. and Chatterjee, U. and Hasnain, S.E. and Kaufman, R.J. and Ramaiah, K.V.A. (1999) Serine 48 in initiation factor 2 alpha (eIF2 alpha) is required for high-affinity interaction between eIF2 alpha(P) and eIF2B. Biochemistry, 38 (46). pp. 15398-405. ISSN 0006-2960

Ali, S. and Hasnain, S.E. (1999) Conservation, management and documentation of livestock genetic resources and biodiversity: A biotechnology perspective. Current Science , 77 (9). pp. 1154-1158. ISSN 0011-3891

Ahmed, A.S.N. and Khan, J.R. and Ganai, N.A. (1999) DNA amplification assay for rapid detection of bovine tubercle bacilli in semen. Animal Reproduction Science, 57 (1-2). pp. 15-21. ISSN 0378-4320

Verma, S.K. and Khanna, Vijay and Singh, Nagendra (1999) Random amplified polymorphic DNA analysis of Indian scented basmati rice (Oryza sativa L.) germplasm for identification of variability and duplicate accessions, if any. Electrophoresis, 20 (8). pp. 1786-1789. ISSN 0173-0835

Niranjan, Y. and Chandak, G.R. and Veerraju, P. and Singh, Lalji (1999) Some atypical and rare sickle cell gene haplotypes in populations of Andhra Pradesh, India. Human Biology, 71 (3). pp. 333-340. ISSN 0018-7143

Singh, Prabhjeet and Chatterjee, Subhadeep and Ranjana, P. and Bhullar, S.S. (1999) Enhanced wheat germ agglutinin accumulation in the germinating embryos of wheat (Triticum aestivum L.) appears to be a general stress response. Current Science, 76 (8). pp. 1140-1142. ISSN 0011-3891

Siva Kumar, S. and Subramaniam, V. and Walimbe, S.R. and Singh, Lalji (1999) Current trends in 'ancient DNA studies'- A review. Current Science , 76 (7). pp. 879-885. ISSN 0011-3891

Kumar, A.N. and Chandak, G.R. and Rajasekhar, A. and Reddy, N.C.K. and Singh, Lalji (1999) Fetus-in-fetu: A case report with molecular analysis. Journal of Pediatric Surgery, 34 (4). pp. 641-644. ISSN 0022-3468

Sharma, A. and Niphadkar, M.P. and Kathirvel, P. and Nagaraju, J. and Singh, Lalji (1999) Brief communication. DNA fingerprint variability within and among the silkworm Bombyx mori varieties and estimation of their genetic relatedness using Bkm-derived probe. Journal of Heredity, 90 (2). pp. 315-319. ISSN 1471-8505

Sah, N.K. and Taneja, T.K. and Pathak, Niteen and Begum, R. and Athar, M. and Hasnain, S.E. (1999) The baculovirus antiapoptotic p35 gene also functions via an oxidant-dependent pathway. Proceedings of the National Academy of Sciences, 96 (9). pp. 4838-4843. ISSN 0027-8424

Shankaranarayanan, P. and Singh, Lalji (1998) A rapid and simplified procedure for isolating DNA from scat samples. Current Science, 75 (9). pp. 883-884. ISSN 0011-3891

Shankaranarayanan, P. and Singh, Lalji (1998) Mitochondrial DNA sequence divergence among big cats and their hybrids. Current Science , 75 (9). pp. 919-923. ISSN 0011-3891

Thangaraj, K. and Gupta, N.J. and Chakravarty, B. and Singh, Lalji (1998) A 47, XXY female. The Lancet, 352 (9134). p. 1121. ISSN 0140-6736

Ahmed, N. and Mohanty, A.K. and Mukhopadhyay, U. and Batish, V.K. and Grover, S. (1998) PCR-based rapid detection of Mycobacterium tuberculosis in blood from immunocompetent patients with pulmonary tuberculosis. Journal of Clinical Microbiology, 36 (10). pp. 3094-3095. ISSN 0095-1137

Nagaraju, J. and Singh, Lalji (1997) Assessment of genetic diversity by DNA profiling and its significance in silkworm,Bombyx mori. Electrophoresis, 18 (9). pp. 1676-1681. ISSN 0173-0835

Shankaranarayanan, P. and Banerjee, M. and Kacker, R.K. and Aggarwal, R.K. and Singh, Lalji (1997) Genetic variation in Asiatic lions and Indian tigers. Electrophoresis, 18 (9). pp. 1693-1700. ISSN 0173-0835

This list was generated on Thu Sep 24 21:49:57 2020 IST.