Article

Ahmed, N. and Alam, M. and Majeed, A.A. and Rahman, S.A. and Cataldi, A. and Cousins, D. and Hasnain, S.E. (2003) Genome sequence based, comparative analysis of the fluorescent amplified fragment length polymorphisms (FAFLP) of tubercle bacilli from seals provides molecular evidence for a new species within the Mycobacterium tuberculosis complex. Infection, Genetics and Evolution, 2 (3). pp. 193-199. ISSN 1567-1348

Ahmed, N. and Caviedes, L. and Alam, M. and Rao, K.R. and Sangal, V. and Sheen, P. and Gilman, R.H. and Hasnain, S.E. (2003) Distinctiveness of Mycobacterium tuberculosis Genotypes from Human Immunodeficiency Virus Type 1-Seropositive and -Seronegative Patients in Lima, Peru. Journal of Clinical Microbiology, 41 (4). pp. 1712-1716. ISSN 0095-1137

Ahmed, N. and Khan, A.A. and Alvi, A. and Tiwari, S. and Jyothirmayee, C.S. and Kauser, S. and Ali, M. and Habibullah, C.M. (2003) Genomic analysis of Helicobacter pylori from Andhra Pradesh, South India: Molecular evidence for three major genetic clusters. Current Science, 85 (11). pp. 1579-1586. ISSN 0011-3891

Ali, S. and Hasnain, S.E. (2003) Genomics of the human Y-chromosome: 1. Association with male infertility. Gene, 321. pp. 25-37. ISSN 0378-1119

Aparna, G. and Bhuyan, A.K. and Sahdev, S. and Hasnain, S.E. and Kaufman, R.J. and Ramaiah, K.V.A. (2003) Stress-Induced Apoptosis in Spodoptera frugiperda(Sf9) Cells: Baculovirus p35 Mitigates eIF2α Phosphorylation. Biochemistry, 42 (51). pp. 15352-15360. ISSN 0006-2960

Aruna, B. and Ghosh, S. and Singh, A.K. and Mande, S.C. and Srinivas, Volety and Chauhan, R. and Ehtesham, N.Z. (2003) Human Recombinant Resistin Protein Displays a Tendency To Aggregate by Forming Intermolecular Disulfide Linkages†. Biochemistry, 42 (36). pp. 10554-10559. ISSN 0006-2960

Bashyam, M.D. (2003) Prokaryotic Genomics (Michel Blot ed.). Current Science, 84 (10). pp. 1366-1367. ISSN 0011-3891

Bashyam, M.D. and Hasnain, S.E. (2003) The human genome sequence: impact on health care. Indian Journal of Medical Research, 117. pp. 43-65. ISSN 0971-5916

Bashyam, M.D. and Mukhopadhyay, Sangita (2003) [Book Review] 1. Status of Tuberculosis in India 2. Trends in Malaria and Vaccine Research: The Current Indian Scenario. Infection, Genetics and Evolution, 3 (1). pp. 75-77. ISSN 15671348

Bashyam, M.D. and Savithri, G.R. and Kumar, M.S. and Narasimhan, C. and Pratibha, N. (2003) Molecular genetics of familial hypertrophic cardiomyopathy (FHC). Journal of Human Genetics, 48 (2). pp. 55-64. ISSN 1434-5161

Carroll, I.M. and Ahmed, N. and Beesley, S.M. and Khan, A.A. and Ghousunnissa, S. and Morain, C.A.O. and Smyth, C.J. (2003) Fine-Structure Molecular Typing of Irish Helicobacter pylori Isolates and Their Genetic Relatedness to Strains from Four Different Continents. Journal of Clinical Microbiology, 41 (12). pp. 5755-5759. ISSN 0095-1137

Choudhary, R.K. and Mukhopadhyay, Sangita and Chakhaiyar, P. and Sharma, N. and Murthy, K.J.R. and Katoch, V.M. and Hasnain, S.E. (2003) PPE Antigen Rv2430c of Mycobacterium tuberculosis Induces a Strong B-Cell Response. Infection and Immunity, 71 (11). pp. 6338-6343. ISSN 0019-9567

Cousins, D.V. and Bastida, R. and Cataldi, A. and Quse, V. and Redrobe, S. and Dow, S. and Duignan, P. and Murray, A. and Dupont, C. and Ahmed, N. and Collins, D.M. and Butler, W.R. and Dawson, D. and Rodríguez, D. and Loureiro, J. and Romano, M.I. and Alito, A. and Zumarraga, M. and Bernardelli, A. (2003) Tuberculosis in seals caused by a novel member of the Mycobacterium tuberculosis complex: Mycobacterium pinnipedii sp. nov. International Journal of Systematic and Evolutionary Microbiology, 53 (5). pp. 1305-1314. ISSN 1466-5026

Ghosh, S. and Singh, A.K. and Aruna, B. and Mukhopadhyay, Sangita and Ehtesham, N.Z. (2003) The genomic organization of mouse resistin reveals major differences from the human resistin: functional implications. Gene, 305 (1). pp. 27-34. ISSN 0378-1119

Gowrishankar, J. and Yamamoto, K. and Subbarayan, P.R. and Ishihama, A. (2003) In vitro properties of RpoS ( S) mutants of Escherichia coli with postulated N-terminal subregion 1.1 or C-terminal region 4 deleted. Journal of Bacteriology, 185 (8). pp. 2673-2679. ISSN 0021-9193

Harinarayanan, R. and Gowrishankar, J. (2003) Host Factor Titration by Chromosomal R-loops as a Mechanism for Runaway Plasmid Replication in Transcription Termination-defective Mutants of Escherichia coli. Journal of Molecular Biology, 332 (1). pp. 31-46. ISSN 0022-2836

Hasnain, S.E. (2003) Molecular epidemiology of infectious diseases: a case for increased surveillance. Bulletin of the World Health Organization, 81 (7). p. 474. ISSN 0042-9686

Hasnain, S.E. and Begum, R. and Ramaiah, K.V.A. and Sahdev, S. and Shajil, E.M. and Taneja, T.K. and Mohan, M. and Athar, M. and Sah, N.K. and Krishnaveni, M. (2003) Host-pathogen interactions during apoptosis. Journal of Biosciences, 28 (3). pp. 349-358. ISSN 0250-5991

King, R.A. and Sen, Ranjan and Weisberg, R.A. (2003) Using a lac repressor roadblock to analyze the E. coli transcription elongation complex. Methods in Enzymology, 371. pp. 207-18. ISSN 0076-6879

Mallikarjuna Rao, G.N. and Hussain, T. and Geetha Devi, N. and Jain, S. and Chandak, G.R. and Ananda Raj, M.P. (2003) Dystrophin gene deletions in South Indian Duchenne muscular dystrophy patients. Indian Journal of Medical Sciences, 57 (1). pp. 1-6. ISSN 0019-5359

Mandal, A.K. and Prabhakara, K. and Reddy, A.B.M. and Radha Rama Devi, A. and Panicker, S.G. (2003) Congenital glaucoma associated with 22p+ variant in a dysmorphic child. Indian Journal of Ophthalmology, 51 (4). pp. 355-7. ISSN 0301-4738

Mohan, M. and Taneja, T.K. and Sahdev, S. and Krishnaveni, M. and Begum, R. and Athar, M. and Sah, N.K. and Hasnain, S.E. (2003) Antioxidants prevent UV-induced apoptosis by inhibiting mitochondrial cytochrome c release and caspase activation in Spodoptera frugiperda (Sf9) cells. Cell Biology International, 27 (6). pp. 483-490. ISSN 1065-6995

Prasad, M.D. and Han, S.J. and Nagaraju, J. and Lee, W.J. and Brey, P.T. (2003) Cloning and characterization of an eukaryotic initiation factor-2α kinase from the silkworm, Bombyx mori. Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression, 1628 (1). pp. 56-63. ISSN 0167-4781

Prasad, M.D. and Nagaraju, J. (2003) A comparative phylogenetic analysis of full-length mariner elements isolated from the Indian tasar silkmoth, Antheraea mylitta (Lepidoptera: saturniidae). Journal of Biosciences, 28 (4). pp. 443-53. ISSN 0250-5991

Priyadarshini, P. and Murthy, B.S. and Nagaraju, J. and Singh, Lalji (2003) A GATA-binding protein expressed predominantly in the pupal ovary of the silkworm, Bombyx mori. Insect Biochemistry and Molecular Biology, 33 (2). pp. 185-195. ISSN 0965-1748

Rajendra Kumar, P. and Singhal, P.K. and Vinod, S.S. and Mahalingam, S. (2003) A Non-canonical Transferable Signal Mediates Nuclear Import of Simian Immunodeficiency Virus Vpx Protein. Journal of Molecular Biology, 331 (5). pp. 1141-1156. ISSN 0022-2836

Reddy, A.B.M. and Panicker, S.G. and Mandal, A.K. and Hasnain, S.E. and Balasubramanian, D. (2003) Identification of R368H as a PredominantCYP1B1Allele Causing Primary Congenital Glaucoma in Indian Patients. Investigative Opthalmology & Visual Science, 44 (10). p. 4200. ISSN 1552-5783

Rekha, T. and Khan, A.A. and Alavi, A. and Hussain, M.A. and Habeeb, A. and Ahmed, N. and Habibullah, C.M. (2003) Genetic fine structure analysis of Helicobacter pylori isolates before and after treatment. Indian Journal of Medical Microbiology, 21 (3). pp. 166-171.

Sahdev, S. and Taneja, T.K. and Mohan, M. and Sah, N.K. and Khar, A.K. and Hasnain, S.E. and Athar, M. (2003) Baculoviral p35 inhibits oxidant-induced activation of mitochondrial apoptotic pathway. Biochemical and Biophysical Research Communications, 307 (3). pp. 483-490. ISSN .0006-291X

Sarkar, A. and Sreenivasan, Y. and Manna, S.K. (2003) alpha-Melanocyte-stimulating hormone induces cell death in mast cells: involvement of NF-kappaB. FEBS Letters, 549 (1-3). pp. 87-93. ISSN 00145793

Sarkar, A. and Sreenivasan, Y. and Manna, S.K. (2003) alpha-Melanocyte-stimulating hormone inhibits lipopolysaccharide-induced biological responses by downregulating CD14 from macrophages. FEBS Letters, 553 (3). pp. 286-294. ISSN 0014-5793

Sen, Ranjan and Dasgupta, Dipak (2003) Simple Fluorescence Assays Probing Conformational Changes of Escherichia coli RNA Polymerase During Transcription Initiation. Methods in Enzymology, 370. pp. 598-605. ISSN 0076-6879

Shiras, A. and Bhosale, A. and Shepal, V. and Shukla, R. and Baburao, V.S. and Prabhakara, K. and Shastry, P. (2003) A unique model system for tumor progression in GBM comprising two developed human neuro-epithelial cell lines with differential transforming potential and coexpressing neuronal and glial markers. Neoplasia , 5 (6). pp. 520-532. ISSN 1522-8002

Sreenivasan, Y. and Sarkar, A. and Manna, S.K. (2003) Mechanism of cytosine arabinoside-mediated apoptosis: role of Rel A (p65) dephosphorylation. Oncogene, 22 (28). pp. 4356-69. ISSN 0950-9232

Sreenivasan, Y. and Sarkar, A. and Manna, S.K. (2003) Oleandrin suppresses activation of nuclear transcription factor-κB and activator protein-1 and potentiates apoptosis induced by ceramide. Biochemical Pharmacology, 66 (11). pp. 2223-2239. ISSN 0006-2952

Sreenu, V.B. and Alevoor, V. and Nagaraju, J. and Nagarajaram, H.A. (2003) MICdb: database of prokaryotic microsatellites. Nucleic Acids Research, 31 (1). pp. 106-108. ISSN 1362-4962

Sreenu, V.B. and Ranjitkumar, G.K. and Swaminathan, S. and Priya, S. and Bose, B. and Pavan, M.N. and Thanu, G. and Nagaraju, J. and Nagarajaram, H.A. (2003) MICAS: a fully automated web server for microsatellite extraction and analysis from prokaryote and viral genomic sequences. Applied Bioinformatics, 2 (3). pp. 165-168. ISSN 1175-5636

Terwilliger, T.C. and Park, M.S. and Waldo, G.S. and Berendzen, J. and Hung, L.-W and Kim, C.-Y and Smith, C.V. and Sacchettini, J. and Bellinzoni, M. and Bossi, R. and De Rossi, E. and Mattevi, A. and Milano, A. and Riccardi, G. and Rizzi, M. and Roberts, M.M. and Coker, A.R. and Fossati, G. and Mascagni, P. and Coates, A.R.M. and Wood, S.P. and Goulding, C.W. and Apostol, M. and Anderson, D.H. and Gill, H.S. and Eisenberg, D.S. and Taneja, B. and Mande, S.C. and Pohl, E. and Lamzin, V. and Tucker, P. and Wilmanns, M. and Colovos, C. and Meyer-Klaucke, W. and Munro, A.W. and McLean, K.J. and Marshall, K.R. and Leys, D. and Yang, J.K. and Yoon, H.-J. and Lee, B.I. and Lee, M.G. and Kwak, J.E. and Han, B.W. and Lee, J.Y. and Baek, S.-H. and Suh, S.W. and Komen, M.M. and Arcus, V.L. and Baker, E.N. and Lott, J.S. and Jacobs, W. and Alber, T. and Rupp, B. (2003) The TB structural genomics consortium: a resource for Mycobacterium tuberculosis biology. Tuberculosis, 83 (4). pp. 223-249. ISSN 1472-9792

Viswanathan, P. and Venkaiah, B. and Kumar, M.S. and Rasheedi, S. and Vrati, S. and Bashyam, M.D. and Hasnain, S.E. (2003) The Homologous Region Sequence (hr1) of Autographa californica Multinucleocapsid Polyhedrosis Virus Can Enhance Transcription from Non-baculoviral Promoters in Mammalian Cells. Journal of Biological Chemistry, 278 (52). pp. 52564-52571. ISSN 0021-9258

Book Section

Nagarajaram, H.A. and Hasnain, S.E. (2003) Current Status of Post-Genomics Computational Biology. In: Computing and Information Sciences: Recent Trends. Narosa Publihing House. ISBN 978-81-7319-491-7

Conference or Workshop Item

Yellaboina, S. and Chakhaiyar, P. and Hasnain, S.E. and Ranjan, R. (2003) Computational prediction of DtxR regulon - a dissection of physiological process controlled by DtxR in Corynebacterium species. In: CSB 2003. Proceedings of the 2003 IEEE , 11-14 Aug. 2003 .