A

Achary, M.S. and Reddy, A.B.M. and Chakrabarti, S. and Panicker, S.G. and Mandal, A.K. and Ahmed, N. and Balasubramanian, D. and Hasnain, S.E. and Nagarajaram, H.A. (2006) Disease-Causing Mutations in Proteins: Structural Analysis of the CYP1b1 Mutations Causing Primary Congenital Glaucoma in Humans. Biophysical Journal, 91 (12). pp. 4329-4339. ISSN 0006-3495

Ahmed, K.S. and Khan, A.A. and Ahmed, I. and Tiwari, S. and Habeeb, M.A. and Ali, S.M. and Ahi, J.D. and Abid, Z. and Alvi, A. and Hussain, M.A. and Ahmed, N. and Habibullah, C.M. (2006) Prevalence study to elucidate the transmission pathways of Helicobacter pylori at oral and gastroduodenal sites of a South Indian population. Singapore Medical Journal, 47 (4). pp. 291-296. ISSN 0037-5675

Ahmed, N. and Devi, S.M. and de los Á Valverde, M. and Vijayachari, P. and Machang'u, R.S. and Ellis, W.A. and Hartskeerl, R.A. (2006) Multilocus sequence typing method for identification and genotypic classification of pathogenic Leptospira species. Annals of Clinical Microbiology and Antimicrobials, 5 (1). p. 28. ISSN 1476-0711

Akif, M. and Akhter, Y. and Hasnain, S.E. and Mande, S.C. (2006) Crystallization and preliminary X-ray crystallographic studies ofMycobacterium tuberculosisCRP/FNR family transcription regulator. Acta Crystallographica Section F Structural Biology and Crystallization Communications, 62 (9). pp. 873-875. ISSN 1744-3091

Archak, S. and Nagaraju, J. (2006) Eicosapentapeptide repeats (EPRs): novel repeat proteins specific to flowering plants. Bioinformatics, 22 (20). pp. 2455-2458. ISSN 1367-4803

Arunkumar, K.P. and Metta, M. and Nagaraju, J. (2006) Molecular phylogeny of silkmoths reveals the origin of domesticated silkmoth, Bombyx mori from Chinese Bombyx mandarina and paternal inheritance of Antheraea proylei mitochondrial DNA. Molecular Phylogenetics and Evolution, 40 (2). pp. 419-27. ISSN 1055-7903

B

Banerjee, S. and Chalissery, J. and Bandey, I. and Sen, Ranjan (2006) Rho-dependent transcription termination: more questions than answers. Journal of Microbiology (Seoul, Korea), 44 (1). pp. 11-22. ISSN 1225-8873

Bocxlaer, I.V. and Roelants, K. and Biju, S.D. and Nagaraju, J. and Bossuyt, F. (2006) Late Cretaceous Vicariance in Gondwanan Amphibians. PLoS ONE, 1 (1). e74. ISSN 1932-6203

D

Devi, S.M. and Ahmed, I. and Khan, A.A. and Rahman, S.A. and Alvi, A. and Sechi, L.A. and Ahmed, N. (2006) Genomes of Helicobacter pylori from native Peruvians suggest admixture of ancestral and modern lineages and reveal a western type cag-pathogenicity island. BMC Genomics, 7 (1). p. 191. ISSN 1471-2164

Du, X. and Rao, M.R.K.S. and Chen, X.Q. and Wu, W. and Mahalingam, S. and Balasundaram, D. (2006) The Homologous Putative GTPases Grn1p from Fission Yeast and the Human GNL3L Are Required for Growth and Play a Role in Processing of Nucleolar Pre-rRNA. Molecular Biology of the Cell, 17 (1). pp. 460-474. ISSN 1059-1524

G

Gandhe, A.S. and Arunkumar, K.P. and John, S.H. and Nagaraju, J. (2006) Analysis of bacteria-challenged wild silkmoth, Antheraea mylitta (lepidoptera) transcriptome reveals potential immune genes. BMC Genomics, 7 (1). p. 184. ISSN 1471-2164

Goyal, K. and Qamra, R. and Mande, S.C. (2006) Multiple Gene Duplication and Rapid Evolution in the groEL Gene: Functional Implications. Journal of Molecular Evolution, 63 (6). pp. 781-787. ISSN 0022-2844

Gutierrez, M.C. and Ahmed, N. and Willery, E. and Narayanan, S. and Hasnain, S.E. and Chauhan, D.S. and Katoch, V.M. and Vincent, V. and Locht, C. and Supply, P. (2006) Predominance of Ancestral Lineages ofMycobacterium tuberculosisin India. Emerging Infectious Diseases, 12 (7). pp. 1367-1374. ISSN 1080-6040

J

Johny, S. and Kanginakudru, S. and Muralirangan, M.C. and Nagaraju, J. (2006) Morphological and molecular characterization of a new microsporidian (Protozoa: Microsporidia) isolated from Spodoptera litura (Fabricius) (Lepidoptera: Noctuidae). Parasitology, 132 (Pt 6). pp. 803-814. ISSN 0031-1820

K

Kashyap, V.K. and Guha, S. and Sitalaximi, T. and Hima Bindu, G. and Hasnain, S.E. and Trivedi, R. (2006) Genetic structure of Indian populations based on fifteen autosomal microsatellite loci. BMC Genetics, 7 (1). p. 28. ISSN 1471-2156

Kazim, S.N. and Sarin, S.K. and Sharma, B.C. and Khan, L.A. and Hasnain, S.E. (2006) Characterization of Naturally Occurring and Lamivudine-Induced Surface Gene Mutants of Hepatitis B Virus in Patients with Chronic Hepatitis B in India. Intervirology, 49 (3). pp. 152-160. ISSN 0300-5526

Kenchappa, P. and Aparna, D. and Ahmed, N. and Pathengay, A. and Das, T.P. and Hasnain, S.E. and Sharma, S. (2006) Fluorescent amplified fragment length polymorphism (FAFLP) genotyping demonstrates the role of biofilm-producing methicillin-resistant periocular Staphylococcus epidermidis strains in postoperative endophthalmitis. BMC Ophthalmology, 6 (1). p. 1. ISSN 14712415

Kenchappa, P. and Rao, K.R. and Ahmed, N. and Joshi, S. and Ghousunnissa, S. and Vijayalakshmi, V. and Murthy, K.J.R. (2006) Fluorescent amplified fragment length polymorphism (FAFLP) based molecular epidemiology of hospital infections in a tertiary care setting in Hyderabad, India. Infection, Genetics and Evolution, 6 (3). pp. 220-227. ISSN 1567-1348

Khan, N. and Rahim, S.S. and Boddupalli, C.S. and Ghousunnissa, S. and Padma, S. and Pathak, Niteen and Thiagarajan, D. and Hasnain, S.E. and Mukhopadhyay, Sangita (2006) Hydrogen peroxide inhibits IL-12 p40 induction in macrophages by inhibiting c-rel translocation to the nucleus through activation of calmodulin protein. Blood, 107 (4). pp. 1513-1520. ISSN 0006-4971

Khosla, Sanjeev and Mendiratta, G. and Brahmachari, V. (2006) Genomic imprinting in the mealybugs. Cytogenetic and Genome Research, 113 (1-4). pp. 41-52. ISSN 1424-8581

Khurad, A.M. and Kanginakudru, S. and Qureshi, S.O. and Rathod, M.K. and Rai, M.M. and Nagaraju, J. (2006) A new Bombyx mori larval ovarian cell line highly susceptible to nucleopolyhedrovirus. Journal of Invertebrate Pathology, 92 (2). pp. 59-65. ISSN 0022-2011

M

Manna, S.K. and Rangasamy, T. and Wise, K. and Sarkar, S. and Shishodia, S. and Biswal, S. and Ramesh, G.T. (2006) Long term environmental tobacco smoke activates nuclear transcription factor-kappa B, activator protein-1, and stress responsive kinases in mouse brain. Biochemical Pharmacology, 71 (11). pp. 1602-1609. ISSN 0006-2952

Manna, S.K. and Sarkar, A. and Sreenivasan, Y. (2006) α-melanocyte-stimulating hormone down-regulates CXC receptors through activation of neutrophil elastase. European Journal of Immunology, 36 (3). pp. 754-769. ISSN 0014-2980

Manna, S.K. and Sreenivasan, Y. and Sarkar, A. (2006) Cardiac glycoside inhibits IL-8-induced biological responses by downregulating IL-8 receptors through altering membrane fluidity. Journal of Cellular Physiology, 207 (1). pp. 195-207. ISSN 0021-9541

N

Nandineni, M.R. (2006) Annual Review of Genomics and Human Genetics 2005, Aravinda Chakravarti and Eric Green (eds). Current Science, 91 (10). pp. 1413-1415. ISSN 0011-3891

Negi, D.S. and Alam, M. and Bhavani, S.A. and Nagaraju, J. (2006) Multistep microsatellite mutation in the maternally transmitted locus D13S317: a case of maternal allele mismatch in the child. International Journal of Legal Medicine, 120 (5). pp. 286-292. ISSN 0937-9827

P

Pani, B. and Banerjee, B. and Chalissery, J. and Muralimohan, A. and Loganathan, R.M. and Suganthan, R.B. and Sen, Ranjan (2006) Mechanism of Inhibition of Rho-dependent Transcription Termination by Bacteriophage P4 Protein Psu. Journal of Biological Chemistry, 281 (36). pp. 26491-26500. ISSN 0021-9258

Prashanth, K. and Badrinath, S. (2006) Nosocomial infections due to Acinetobacter species: Clinical findings, risk and prognostic factors. Indian Journal of Medical Microbiology, 24 (1). p. 39. ISSN 0255-0857

Q

Qamra, R. and Prakash, P. and Aruna, B. and Hasnain, S.E. and Mande, S.C. (2006) The 2.15 Å Crystal Structure ofMycobacterium tuberculosisChorismate Mutase Reveals an Unexpected Gene Duplication and Suggests a Role in Host−Pathogen Interactions†. Biochemistry, 45 (23). pp. 6997-7005. ISSN 0006-2960

R

Radha Rama Devi, A. and Gopikrishna, M. and Ratheesh, R. and Savithri, G.R. and Gowrishankar, S. and Bashyam, M.D. (2006) Farber lipogranulomatosis: clinical and molecular genetic analysis reveals a novel mutation in an Indian family. Journal of Human Genetics, 51 (9). pp. 811-814. ISSN 1434-5161

Radha Rama Devi, A. and Naushad, S.M. and Krishnaprasad, C. (2006) Evaluation of total plasma homocysteine in Indian newborns using heel-prick samples. The Indian Journal of Pediatrics, 73 (6). pp. 503-508. ISSN 0019-5456

Ramasarma, T. and Rao, A.V.S. (2006) Decavanadate interacts with microsomal NADH oxidation system and enhances cytochrome c reduction. Molecular and Cellular Biochemistry, 281 (1-2). pp. 139-144. ISSN 0300-8177

Ranjan, Sarita and Kumar, G.R. and Ranjan, Akash (2006) MycoperonDB: a database of computationally identified operons and transcriptional units in Mycobacteria. BMC Bioinformatics, 7 (Suppl ). S9. ISSN 14712105

Ranjan, Sarita and Seshadri, J. and Vindal, V. and Yellaboina, S. and Ranjan, Akash (2006) iCR: a web tool to identify conserved targets of a regulatory protein across the multiple related prokaryotic species. Nucleic Acids Research, 34 (Web Se). W584-W587. ISSN 0305-1048

Ranjan, Sarita and Yellaboina, S. and Ranjan, Akash (2006) IdeR in Mycobacteria: From Target Recognition to Physiological Function. Critical Reviews in Microbiology, 32 (2). pp. 69-75. ISSN 1040-841X

Rao, K.R. and Ahmed, N. and Srinivas, S. and Sechi, L.A. and Hasnain, S.E. (2006) Rapid Identification of Mycobacterium tuberculosis Beijing Genotypes on the Basis of the Mycobacterial Interspersed Repetitive Unit Locus 26 Signature. Journal of Clinical Microbiology, 44 (1). pp. 274-277. ISSN 0095-1137

S

Sarkar, S. and Wise, K.C. and Manna, S.K. and Ramesh, V. and Yamauchi, K. and Thomas, R.L. and Wilson, B.L. and Kulkarni, A.D. and Pellis, N.R. and Ramesh, G.T. (2006) Activation of activator protein-1 in mouse brain regions exposed to simulated microgravity. In Vitro Cellular & Developmental Biology - Animal, 42 (3-4). pp. 96-99. ISSN 1543-706X

Sechi, L.A. and Ahmed, N. and Felis, G.E. and Duprè, I. and Cannas, S. and Fadda, G. and Bua, A. and Zanetti, S. (2006) Immunogenicity and cytoadherence of recombinant heparin binding haemagglutinin (HBHA) of Mycobacterium avium subsp. paratuberculosis: Functional promiscuity or a role in virulence? Vaccine, 24 (3). pp. 236-243. ISSN 0264-410X

Sechi, L.A. and Gazouli, M. and Sieswerda, L.E. and Molicotti, P. and Ahmed, N. and Ikonomopoulos, J. and Scanu, A.M. and Paccagnini, D. and Zanetti, S. (2006) Relationship between Crohn's disease, infection with Mycobacterium avium subspecies paratuberculosis and SLC11A1 gene polymorphisms in Sardinian patients. World Journal of Gastroenterology, 12 (44). pp. 7161-7164. ISSN 1007-9327

Sechi, L.A. and Mara, L. and Cappai, P. and Frothingam, R. and Ortu, S. and Leoni, A. and Ahmed, N. and Zanetti, S. (2006) Immunization with DNA vaccines encoding different mycobacterial antigens elicits a Th1 type immune response in lambs and protects against Mycobacterium avium subspecies paratuberculosis infection. Vaccine, 24 (3). pp. 229-235. ISSN 0264-410X

Singhal, P.K. and Kumar, P.R. and Rao, M.R.K.S. and Kyasani, M. and Mahalingam, S. (2006) Simian Immunodeficiency Virus Vpx Is Imported into the Nucleus via Importin Alpha-Dependent and -Independent Pathways. Journal of Virology, 80 (1). pp. 526-536. ISSN 0022-538X

Singhal, P.K. and Rajendra Kumar, P. and Subba Rao, M.R.K. and Mahalingam, S. (2006) Nuclear Export of Simian Immunodeficiency Virus Vpx Protein. Journal of Virology, 80 (24). pp. 12271-12282. ISSN 0022-538X

Sreenu, V.B. and Kumar, P. and Nagaraju, J. and Nagarajaram, H.A. (2006) Microsatellite polymorphism across the M. tuberculosis and M. bovis genomes: Implications on genome evolution and plasticity. BMC Genomics, 7 (1). p. 78. ISSN 1471-2164

Srivastava, Varsha (2006) DNA Fingerprinting in the Criminal Justice System: An Overview. DNA and Cell Biology, 25 (3). pp. 181-188. ISSN 1044-5498

Subba Rao, M.R.K. and Gita Kumari, and Balasundaram, D. and Sankaranarayanan, R. and Mahalingam, S. (2006) A Novel Lysine-rich Domain and GTP Binding Motifs Regulate the Nucleolar Retention of Human Guanine Nucleotide Binding Protein, GNL3L. Journal of Molecular Biology, 364 (4). pp. 637-654. ISSN 0022-2836

T

Tundup, S. and Akhter, Y. and Thiagarajan, D. and Hasnain, S.E. (2006) Clusters of PE and PPE genes of Mycobacterium tuberculosis are organized in operons: Evidence that PE Rv2431c is co-transcribed with PPE Rv2430c and their gene products interact with each other. FEBS Letters, 580 (5). pp. 1285-1293. ISSN 0014-5793

V

Vijayakrishnan, S. and Qamra, R. and Verma, C.S. and Sen, Ranjan and Mande, S.C. (2006) Cation-Mediated Interplay of Loops in Chaperonin-10. Journal of Biomolecular Structure and Dynamics, 23 (4). pp. 365-375. ISSN 0739-1102

Y

Yellaboina, S. and Ranjan, Sarita and Vindal, V. and Ranjan, Akash (2006) Comparative analysis of iron regulated genes in mycobacteria. FEBS Letters, 580 (11). pp. 2567-2576. ISSN 0014-5793