Article

Chakraborty, S. and Shukla, S.P. and Arunkumar, K.P. and Nagaraju, J. and Gadagkar, R. (2018) Genetic relatedness does not predict the queen’s successors in the primitively eusocial wasp, Ropalidia marginata. Journal of Genetics, 97 (2). pp. 429-438. ISSN 0022-1333

Deborah, D.A. and Vemireddy, L.R. and Roja, V. and Patil, S. and Choudhary, G.P. and Noor, S. and Srividhya, A. and Kaliappan, A. and Sandhya Rani, B. and Satyavathi, V.V. and Anuradha, G. and Radhika, K. and Yamini, K.N. and Gopalakrishna , M.K. and Ranjith Kumar, N. and Siddiq, E.A. and Nagaraju, J. (2017) Molecular dissection of QTL governing grain size traits employing association and linkage mapping in Basmati rice. Molecular Breeding, 37 (6). p. 77. ISSN 1380-3743

Gopinath, G. and Arunkumar, K.P. and Mita, K. and Nagaraju, J. (2016) Role of Bmznf-2, a Bombyx mori CCCH zinc finger gene, in masculinisation and differential splicing of Bmtra-2. Insect Biochemistry and Molecular Biology, 75. pp. 32-44. ISSN 0965-1748

Satyavathi, V.V. and Deepa, N. and Nagaraju, J. (2016) Noduler an immune protein augments infection-induced cell proliferation through cross-talking with p38 MAPK. Immunobiology, 221 (2). pp. 387-397. ISSN 0171-2985

Chen, Z. and Nohata, J. and Guo, H. and Li, S. and Liu, J. and Guo, Y. and Yamamoto, K. and Kadono-Okuda, K. and Liu, C. and Arunkumar, K.P. and Nagaraju, J. and Zhang, Y. and Liu, S. and Labropoulou, V. and Swevers, L. and Tsitoura, P. and Iatrou, K. and Gopinathan, K.P. and Goldsmith, M.R. and Xia, Q. and Mita, K. (2015) Construction, complete sequence, and annotation of a BAC contig covering the silkworm chorion locus. Scientific Data, 2. p. 150062. ISSN 2052-4463

Chen, Z. and Nohata, J. and Guo, H. and Li, S. and Liu, J. and Guo, Y. and Yamamoto, K. and Kadono-Okuda, K. and Liu, C. and Arunkumar, K.P. and Nagaraju, J. and Zhang, Y. and Liu, S. and Labropoulou, V. and Swevers, L. and Tsitoura, P. and Iatrou, K. and Gopinathan, K.P. and Goldsmith, M.R. and Xia, Q. and Mita, K. (2015) A comprehensive analysis of the chorion locus in silkmoth. Scientific Reports, 5. p. 16424. ISSN 2045-2322

Chakraborty, S. and Muthulakshmi, M. and Vardhini, D. and Jayaprakash, P. and Nagaraju, J. and Arunkumar, K.P. (2015) Genetic analysis of Indian tasar silkmoth (Antheraea mylitta) populations. Scientific Reports, 5. p. 15728. ISSN 2045-2322

Vemireddy, L.R. and Noor, S. and Satyavathi, V.V. and Srividhya, A. and Kaliappan, A. and Parimala, S.R.N. and Bharathi, P.M. and Deborah, D.A. and Sudhakar Rao, K.V. and Shobharani, N. and Siddiq, E.A. and Nagaraju, J. (2015) Discovery and mapping of genomic regions governing economically important traits of Basmati rice. BMC Plant Biology, 15 (1). p. 207. ISSN 1471-2229

Gupta, K.A. and Mita, K. and Arunkumar, K.P. and Nagaraju, J. (2015) Molecular architecture of silk fibroin of Indian golden silkmoth, Antheraea assama. Scientific Reports, 5. p. 12706. ISSN 2045-2322

Vemireddy, L.R. and Satyavathi, V.V. and Siddiq, E.A. and Nagaraju, J. (2015) Review of methods for the detection and quantification of adulteration of rice: Basmati as a case study. Journal of Food Science and Technology, 52 (6). pp. 3187-3202. ISSN 0022-1155

Salvemini, M. and Arunkumar, K.P. and Nagaraju, J. (2014) De Novo Assembly and Transcriptome Analysis of the Mediterranean Fruit Fly Ceratitis capitata Early Embryos. PLoS One, 9 (12). e114191. ISSN 1932-6203

Satyavathi, V.V. and Minz, A. and Nagaraju, J. (2014) Nodulation: an unexplored cellular defense mechanism in insects. Cellular Signalling, 26 (8). pp. 1753-63. ISSN 1873-3913

Sackton, T.B. and Corbett-Detig, R.B. and Nagaraju, J. and Vaishna, L. and Arunkumar, K.P. and Hartl, D.L.. (2014) Positive selection drives faster-Z evolution in silkmoths. Evolution, 68 (8). pp. 2331-2342. ISSN 0014-3820

Ballantyne, K.N. and Ralf, A. and Aboukhalid, R. and Achakzai, N.M. and Anjos, M.J. and Ayub, Q. and Balažic, J. and Ballantyne, J. and Ballard, D.J. and Berger, B. and Bobillo, C. and Bouabdellah, M. and Burri, H. and Capal, T. and Caratti, S. and Cárdenas, J. and Cartault, F. and Carvalho, E.F. and Carvalho, M. and Cheng, B. and Coble, M.D. and Comas, D. and Corach, D. and D'Amato, M.E. and Davison, S. and de Knijff, P. and De Ungria, M.C.A. and Decorte, R. and Dobosz, T. and Dupuy, B.M. and Elmrghni, S. and Gliwiński, M. and Gomes, S.C. and Grol, L. and Haas, C. and Hanson, E. and Henke, J. and Henke, L. and Herrera-Rodríguez, F. and Hill, C.R. and Holmlund, G. and Honda, K. and Immel, U.D. and Inokuchi, S. and Jobling, M.A. and Kaddura, M. and Kim, J.S. and Kim, S.H. and Kim, W. and King, T.E. and Klausriegler, E. and Kling, D. and Kovačević, L. and Kovatsi, L. and Krajewski, P. and Kravchenko, S. and Larmuseau, M.H.D. and Lee, E.Y. and Lessig, R. and Livshits, L.A. and Marjanović, D. and Minarik, M. and Mizuno, N. and Moreira, H. and Morling, N. and Mukherjee, M. and Munier, P. and Nagaraju, J. and Neuhuber, F. and Nie, S. and Nilasitsataporn, P. and Nishi, T. and Oh, H.H. and Olofsson, J. and Onofri, V. and Palo, J.U. and Pamjav, H. and Parson, W. and Petlach, M. and Phillips, C. and Ploski, R. and Prasad, S.P.R. and Primorac, D. and Purnomo, G.A. and Purps, J. and Rangel-Villalobos, H. and Rębała, K. and Rerkamnuaychoke, B. and Gonzalez, D.R. and Robino, C. and Roewer, L. and Rosa, A. and Sajantila, A. and Sala, A. and Salvador, J.M. and Sanz, P. and Schmitt, C. and Sharma, A.K. and Silva, D.A. and Shin, K.J. and Sijen, T. and Sirker, M. and Siváková, D. and Skaro, V. and Solano-Matamoros, C. and Souto, L. and Stenzl, V. and Sudoyo, H. and Syndercombe-Court, D. and Tagliabracci, A. and Taylor, D. and Tillmar, A. and Tsybovsky, I.S. and Tyler-Smith, C. and van der Gaag, K.J. and Vanek, D. and Völgyi, A. and Ward, D. and Willemse, P. and Yap, E.P.H. and Yong, R.Y.Y. and Pajnič, I.Z. and Kayser, M. (2014) Toward male individualization with rapidly mutating y-chromosomal short tandem repeats. Human Mutation, 35 (8). pp. 1021-32. ISSN 1098-1004

Singh, C.P. and Singh, J. and Nagaraju, J. (2014) bmnpv-miR-3 facilitates BmNPV infection by modulating the expression of viral P6.9 and other late genes in Bombyx mori. Insect Biochemistry and Molecular Biology, 49. pp. 59-69. ISSN 1879-0240

Nagaraju, J. and Gopinath, G. and Sharma, V. and Shukla, J.N. (2014) Lepidopteran sex determination: a cascade of surprises. Sexual Development, 8 (1-3). pp. 104-12. ISSN 1661-5433

Singh, C.P. and Vaishna, L. and Kakkar, Akanksha and Arunkumar, K.P. and Nagaraju, J. (2014) Characterization of antiviral and antibacterial activity of Bombyx mori seroin proteins. Cellular Microbiology, 16 (9). pp. 1354-1365. ISSN 1462-5822

Archak, S. and Nagaraju, J. (2014) Computational analyses of protein coded by rice (Oryza sativa japonica) cDNA (GI: 32984786) indicate lectin like Ca(2+) binding properties for Eicosapenta Peptide Repeats (EPRs). Bioinformation, 10 (2). pp. 63-67. ISSN 0973-2063

Suetsugu, Y. and Futahashi, R. and Kanamori, H. and Kadono-Okuda, K. and Sasanuma, S.-i. and Narukawa, J. and Ajimura, M. and Jouraku, A. and Namiki, N. and Shimomura, M. and Sezutsu, H. and Osanai-Futahashi, M. and Suzuki, M.G. and Daimon, T. and Shinoda, T. and Taniai, K. and Asaoka, K. and Niwa, R. and Kawaoka, S. and Katsuma, S. and Tamura, T. and Noda, H. and Kasahara, M. and Sugano, S. and Suzuki, Y. and Fujiwara, H. and Kataoka, H. and Arunkumar, K.P. and Tomar, A. and Nagaraju, J. and Goldsmith, M.R. and Feng, Q. and Xia, Q. and Yamamoto, K. and Shimada, T. and Mita, K. (2013) Large Scale Full-Length cDNA Sequencing Reveals a Unique Genomic Landscape in a Lepidopteran Model Insect, Bombyx mori. G3 Genes Genomes Genetics, 3 (9). pp. 1481-1492. ISSN 2160-1836

Yonemura, N. and Tamura, T. and Uchino, K. and Kobayashi, I. and Tatematsu, K.-I. and Iizuka, T. and Tsubota, T. and Sezutsu, H. and Muthulakshmi, M. and Nagaraju, J. and Kusakabe, T. (2013) phiC31-integrase-mediated, site-specific integration of transgenes in the silkworm, Bombyx mori (Lepidoptera: Bombycidae). Applied Entomology and Zoology, 48 (3). pp. 265-273. ISSN 0003-6862

Subbaiah, E.V. and Royer, C. and Kanginakudru, S. and Satyavathi, V.V. and Babu, A.S. and Sivaprasad, V. and Chavancy, G. and DaRocha, M. and Jalabert, A. and Mauchamp, B. and Basha, I. and Couble, P. and Nagaraju, J. (2013) Engineering Silkworms for Resistance to Baculovirus Through Multigene RNA Interference. Genetics, 193 (1). pp. 63-75. ISSN 0016-6731

Flatt, T. and Singh, Y.T. and Mazumdar-Leighton, S. and Saikia, M. and Pant, P. and Kashung, S. and Neog, K. and Chakravorty, R. and Nair, S. and Nagaraju, J. and Babu, C.R. (2012) Genetic Variation within Native Populations of Endemic Silkmoth Antheraea assamensis (Helfer) from Northeast India Indicates Need for In Situ Conservation. PLoS ONE, 7 (11). e49972. ISSN 1932-6203

Yonemura, N. and Tamura, T. and Uchino, K. and Kobayashi, I. and Tatematsu, K. and Iizuka, T. and Sezutsu, H. and Muthulakshmi, M. and Nagaraju, J. and Kusakabe, T. (2012) PhiC31 integrase-mediated cassette exchange in silkworm embryos. Molecular Genetics and Genomics, 287 (9). pp. 731-739. ISSN 1617-4615

Arunkumar, K.P. and Sahu, A.K. and Mohanty, A.R. and Awasthi, A.K. and Pradeep, A.R. and Urs, S.R. and Nagaraju, J. (2012) Genetic Diversity and Population Structure of Indian Golden Silkmoth (Antheraea assama). PLoS ONE, 7 (8). e43716. ISSN 1932-6203

Singh, C.P. and Singh, J. and Nagaraju, J. (2012) A Baculovirus-Encoded MicroRNA (miRNA) Suppresses Its Host miRNA Biogenesis by Regulating the Exportin-5 Cofactor Ran. Journal of Virology, 86 (15). pp. 7867-7879. ISSN 0022-538X

Mrinal, N. and Tomar, A. and Nagaraju, J. (2011) Role of sequence encoded κB DNA geometry in gene regulation by Dorsal. Nucleic Acids Research, 39 (22). pp. 9574-9591. ISSN 0305-1048

Arunkumar, K.P. and Nagaraju, J. (2011) Drosophila intersex orthologue in the silkworm, Bombyx mori and related species. Genetica, 139 (1). pp. 141-147. ISSN 0016-6707

Bentur, J.S. and Sinha, D.K. and Padmavathy, Ch. and Revathy, C. and Muthulakshmi, M. and Nagaraju, J. (2011) Isolation and Characterization of Microsatellite Loci in the Asian Rice Gall Midge (Orseolia oryzae) (Diptera: Cecidomyiidae). International Journal of Molecular Sciences, 12 (12). pp. 755-772. ISSN 1422-0067

Shukla, J.N. and Jadhav, S. and Nagaraju, J. (2011) Novel female-specific splice form of dsx in the silkworm, Bombyx mori. Genetica, 139 (1). pp. 23-31. ISSN 0016-6707

Singh, J. and Singh, C.P. and Bhavani, A. and Nagaraju, J. (2010) Discovering microRNAs from Bombyx mori nucleopolyhedrosis virus. Virology, 407 (1). pp. 120-128. ISSN 0973-7138

Shukla, J.N. and Nagaraju, J. (2010) Doublesex: a conserved downstream gene controlled by diverse upstream regulators. Journal of Genetics, 89 (3). pp. 341-356. ISSN 0973-7731

Nagaraju, J. and Saccone, G. (2010) How is sex determined in insects? An epilogue. Journal of Genetics, 89 (3). pp. 389-390. ISSN 0973-7731

Nagaraju, J. and Saccone, G. (2010) How is sex determined in insects? [Preface]. Journal of Genetics, 89 (3). pp. 269-270. ISSN 0973-7731

Shukla, J.N. and Nagaraju, J. (2010) Two female-specific DSX proteins are encoded by the sex-specific transcripts of dsx, and are required for female sexual differentiation in two wild silkmoth species, Antheraea assama and Antheraea mylitta (Lepidoptera, Saturniidae). Insect Biochemistry and Molecular Biology, 40 (9). pp. 672-682. ISSN 0965-1748

Nandineni, M.R. and Prasad, S.P.R. and Goud, Ch.V. and Negi, D.S. and Nagaraju, J. and Gowrishankar, J. (2010) DNA - based identification of victims of the Mangalore air crash of May 2010. Current Science, 99 (3). pp. 341-342. ISSN 0011-3891

Mrinal, N. and Nagaraju, J. (2010) Dynamic Repositioning of Dorsal to Two Different B Motifs Controls Its Autoregulation during Immune Response in Drosophila. Journal of Biological Chemistry, 285 (31). pp. 24206-24216. ISSN 0021-9258

Shimomura, M. and Minami, H. and Suetsugu, Y. and Ohyanagi, H. and Satoh, C. and Antonio, B. and Nagamura, Y. and Kadono-Okuda, K. and Kajiwara, H. and Sezutsu, H. and Nagaraju, J. and Goldsmith, M.R. and Xia, Q. and Yamamoto, K. and Mita, K. (2009) KAIKObase: An integrated silkworm genome database and data mining tool. BMC Genomics, 10 (1). p. 486. ISSN 1471-2164

Johny, S. and Chakraborty, S. and Gadagkar, R. and Nagaraju, J. (2009) Polymorphic microsatellite loci for primitively eusocial waspRopalidia marginata. Molecular Ecology Resources, 9 (4). pp. 1172-1175. ISSN 1755-098X

Arunkumar, K.P. and Mita, K. and Nagaraju, J. (2009) The Silkworm Z Chromosome Is Enriched in Testis-Specific Genes. Genetics, 182 (2). pp. 493-501. ISSN 0016-6731

Arunkumar, K.P. and Kifayathullah, L. and Nagaraju, J. (2009) Microsatellite markers for the Indian golden silkmoth,Antheraea assama(Saturniidae: Lepidoptera). Molecular Ecology Resources, 9 (1). pp. 268-270. ISSN 1755-098X

Mrinal, N. and Nagaraju, J. (2008) Intron Loss Is Associated with Gain of Function in the Evolution of the Gloverin Family of Antibacterial Genes in Bombyx mori. Journal of Biological Chemistry, 283 (34). pp. 23376-23387. ISSN 0021-9258

Singh, J. and Nagaraju, J. (2008) In silicoprediction and characterization of microRNAs from red flour beetle (Tribolium castaneum). Insect Molecular Biology, 17 (4). pp. 427-436. ISSN 0962-1075

Arunkumar, K.P. and Tomar, A. and Daimon, T. and Shimada, T. and Nagaraju, J. (2008) WildSilkbase: An EST database of wild silkmoths. BMC Genomics, 9 (1). p. 338. ISSN 1471-2164

Sriramana, K. and Muralidhar, M. and Jakati, R.D. and Nagaraju, J. (2008) Genetic evidence from Indian red jungle fowl corroborates multiple domestication of modern day chicken. BMC Evolutionary Biology, 8 (1). p. 174. ISSN 1471-2148

Archak, S. and Nagaraju, J. (2007) Computational Prediction of Rice (Oryza sativa) miRNA Targets. Genomics, Proteomics & Bioinformatics, 5 (3-4). pp. 196-206. ISSN 1672-0229

Gandhe, A.S. and John, S.H. and Nagaraju, J. (2007) Noduler, A Novel Immune Up-Regulated Protein Mediates Nodulation Response in Insects. The Journal of Immunology, 179 (10). pp. 6943-6951. ISSN 0022-1767

Vemireddy, L.R. and Archak, S. and Nagaraju, J. (2007) Capillary Electrophoresis Is Essential for Microsatellite Marker Based Detection and Quantification of Adulteration of Basmati Rice ( Oryza sativa). Journal of Agricultural and Food Chemistry, 55 (20). pp. 8112-8117. ISSN 0021-8561

Kanginakudru, S. and Royer, C. and Edupalli, S.V. and Jalabert, A. and Mauchamp, B. and Prasad, S.V. and Chavancy, G. and Couble, P. and Nagaraju, J. (2007) Targeting ie-1 gene by RNAi induces baculoviral resistance in lepidopteran cell lines and in transgenic silkworms. Insect Molecular Biology, 16 (5). pp. 635-644. ISSN 0962-1075

Biju, S.D. and Bocxlaer, I.V. and Giri, V.B. and Roelants, K. and Nagaraju, J. and Bossuyt, F. (2007) A new nightfrog, Nyctibatrachus minimus sp. nov.(Anura: Nyctibatrachidae): The smallest frog from India. Current Science, 93 (6). pp. 854-858. ISSN 0011-3891

Ravi Kumar, A. and Satish, V. and Balakrish Nair, G. and Nagaraju, J. (2007) Genetic characterization of Vibrio choleraestrains by inter simple sequence repeat-PCR. FEMS Microbiology Letters, 272 (2). pp. 251-258. ISSN 0378-1097

Archak, S. and Lakshminarayanareddy, V. and Nagaraju, J. (2007) High-throughput multiplex microsatellite marker assay for detection and quantification of adulteration in Basmati rice (Oryza sativa). Electrophoresis, 28 (14). pp. 2396-2405. ISSN 0173-0835

Gandhe, A.S. and Janardhan, G. and Nagaraju, J. (2007) Immune upregulation of novel antibacterial proteins from silkmoths (Lepidoptera) that resemble lysozymes but lack muramidase activity. Insect Biochemistry and Molecular Biology, 37 (7). pp. 655-666. ISSN 0965-1748

Meglécz, E. and Anderson, S.J. and Bourguet, D. and Butcher, R. and Caldas, A. and Cassel-Lundhagen, A. and d'Acier, A.C. and Dawson, D.A. and Faure, N. and Fauvelot, C. and Franck, P. and Harper, G. and Keyghobadi, N. and Kluetsch, C. and Muthulakshmi, M. and Nagaraju, J. and Patt, A. and Péténian, F. and Silvain, J.-F. and Wilcock, H.R. (2007) Microsatellite flanking region similarities among different loci within insect species. Insect Molecular Biology, 16 (2). pp. 175-185. ISSN 0962-1075

Sreenu , V.B. and Kumar, P. and Nagaraju, J. and Nagarajaram, H.A. (2007) Simple sequence repeats in mycobacterial genomes. Journal of Biosciences, 32 (1). pp. 3-15. ISSN 0250-5991

Archak, S. and Nagaraju, J. (2007) InSatDb: A Genomic Tool for Insect Geneticists. Fly, 1 (5). pp. 279-281. ISSN 1933-6934

Archak, S. and Meduri, E. and Kumar, P.S. and Nagaraju, J. (2007) InSatDb: a microsatellite database of fully sequenced insect genomes. Nucleic Acids Research, 35 (Suppl). D36-D39. ISSN 0305-1048

Bocxlaer, I.V. and Roelants, K. and Biju, S.D. and Nagaraju, J. and Bossuyt, F. (2006) Late Cretaceous Vicariance in Gondwanan Amphibians. PLoS ONE, 1 (1). e74. ISSN 1932-6203

Archak, S. and Nagaraju, J. (2006) Eicosapentapeptide repeats (EPRs): novel repeat proteins specific to flowering plants. Bioinformatics, 22 (20). pp. 2455-2458. ISSN 1367-4803

Negi, D.S. and Alam, M. and Bhavani, S.A. and Nagaraju, J. (2006) Multistep microsatellite mutation in the maternally transmitted locus D13S317: a case of maternal allele mismatch in the child. International Journal of Legal Medicine, 120 (5). pp. 286-292. ISSN 0937-9827

Arunkumar, K.P. and Metta, M. and Nagaraju, J. (2006) Molecular phylogeny of silkmoths reveals the origin of domesticated silkmoth, Bombyx mori from Chinese Bombyx mandarina and paternal inheritance of Antheraea proylei mitochondrial DNA. Molecular Phylogenetics and Evolution, 40 (2). pp. 419-27. ISSN 1055-7903

Gandhe, A.S. and Arunkumar, K.P. and John, S.H. and Nagaraju, J. (2006) Analysis of bacteria-challenged wild silkmoth, Antheraea mylitta (lepidoptera) transcriptome reveals potential immune genes. BMC Genomics, 7 (1). p. 184. ISSN 1471-2164

Johny, S. and Kanginakudru, S. and Muralirangan, M.C. and Nagaraju, J. (2006) Morphological and molecular characterization of a new microsporidian (Protozoa: Microsporidia) isolated from Spodoptera litura (Fabricius) (Lepidoptera: Noctuidae). Parasitology, 132 (Pt 6). pp. 803-814. ISSN 0031-1820

Khurad, A.M. and Kanginakudru, S. and Qureshi, S.O. and Rathod, M.K. and Rai, M.M. and Nagaraju, J. (2006) A new Bombyx mori larval ovarian cell line highly susceptible to nucleopolyhedrovirus. Journal of Invertebrate Pathology, 92 (2). pp. 59-65. ISSN 0022-2011

Sreenu, V.B. and Kumar, P. and Nagaraju, J. and Nagarajaram, H.A. (2006) Microsatellite polymorphism across the M. tuberculosis and M. bovis genomes: Implications on genome evolution and plasticity. BMC Genomics, 7 (1). p. 78. ISSN 1471-2164

Miao, X.-X. and Xub, S.-J. and Li, M.-H. and Li, M.-W. and Huang, J.-H. and Dai, F.-Y. and Marino, S.W. and Mills, D.R. and Zeng, P. and Mita, K. and Jia, S.-H. and Zhang, Y. and Liu, W.-B. and Xiang, H. and Guo, Q.-H. and Xu, A.-Y. and Kong, X.-Y. and Lin, H.-X. and Shi, Y.-Z. and Lu, G. and Zhang, X. and Huang, W. and Yasukochi, Y. and Sugasaki, T. and Shimada, T. and Nagaraju, J. and Xiang, Z.-H. and Wang, S.-Y. and Goldsmith, M.R. and Lu, C. and Zhao, G.-P. and Huang, Y.-P. (2005) Simple sequence repeat-based consensus linkage map of Bombyx mori. Proceedings of the National Academy of Sciences, 102 (45). pp. 16303-16308. ISSN 0027-8424

Nagaraja, G.M. and Mahesh, G. and Satish, V. and Madhu, M. and Muthulakshmi, M. and Nagaraju, J. (2005) Genetic mapping of Z chromosome and identification of W chromosome-specific markers in the silkworm, Bombyx mori. Heredity, 95 (2). pp. 148-157. ISSN 0018-067X

Marec, F. and Neven, L.G. and Robinson, A.S. and Vreysen, M. and Goldsmith, M.R. and Nagaraju, J. and Franz, G. (2005) Development of genetic sexing strains in Lepidoptera: from traditional to transgenic approaches. Journal of Economic Entomology, 98 (2). pp. 248-259. ISSN 0022-0493

Prasad, M.D. and Muthulakshmi, M. and Arunkumar, K.P. and Madhu, M. and Sreenu, V.B. and Pavithra, V. and Bose, B. and Nagarajaram, H.A. and Mita, K. and Shimada, T. and Nagaraju, J. (2005) SilkSatDb: a microsatellite database of the silkworm, Bombyx mori. Nucleic Acids Research, 33 (Supp 1). D403-D406. ISSN 1362-4962

Prasad, M.D. and Muthulakshmi, M. and Madhu, M. and Archak, S. and Mita, K. and Nagaraju, J. (2005) Survey and Analysis of Microsatellites in the Silkworm, Bombyx mori: Frequency, Distribution, Mutations, Marker Potential and Their Conservation in Heterologous Species. Genetics, 169 (1). pp. 197-214. ISSN 0016-6731

Nagaraju, J. (2004) Spider silks: a possible key to evolution of spiders. Heredity, 93 (5). pp. 520-521. ISSN 0018-067X

Yasodha, R. and Kathirvel, M. and Sumathi, R. and Gurumurthi, K. and Archak, S. and Nagaraju, J. (2004) Genetic analyses of casuarinas using ISSR and FISSR markers. Genetica, 122 (2). pp. 161-72. ISSN 0016-6707

Nagaraja, and Nagaraju, J. and Ranganath, H.A. (2004) Molecular phylogeny of the nasuta subgroup of Drosophila based on 12S rRNA, 16S rRNA and CoI mitochondrial genes, RAPD and ISSR polymorphisms. Genes & Genetic Systems, 79 (5). pp. 293-299. ISSN 1341-7568

Khurad, A.M. and Mahulikar, A. and Rathod, M.K. and Rai, M.M. and Kanginakudru, S. and Nagaraju, J. (2004) Vertical transmission of nucleopolyhedrovirus in the silkworm, Bombyx mori L. Journal of Invertebrate Pathology, 87 (1). pp. 8-15. ISSN 0022-2011

Nageswara Rao, S. and Muthulakshmi, M. and Kanginakudru, S. and Nagaraju, J. (2004) Phylogenetic relationships of three new microsporidian isolates from the silkworm, Bombyx mori. Journal of Invertebrate Pathology, 86 (3). pp. 87-95. ISSN 0022-2011

Metta, M. and Kanginakudru, S. and Gudiseva, N. and Nagaraju, J. (2004) Genetic characterization of the Indian cattle breeds, Ongole and Deoni (Bos indicus), using microsatellite markers – a preliminary study. BMC Genetics, 5 (1). p. 16. ISSN 1471-2156

Awasthi, A.K. and Nagaraja, G.M. and Naik, G.V. and Kanginakudru, S. and Thangavelu, K. and Nagaraju, J. (2004) Genetic diversity and relationships in mulberry (genus Morus) as revealed by RAPD and ISSR marker assays. BMC Genetics, 5 (1). pp. 1-9. ISSN 1471-2156

Prasad, M.D. and Han, S.J. and Nagaraju, J. and Lee, W.J. and Brey, P.T. (2003) Cloning and characterization of an eukaryotic initiation factor-2α kinase from the silkworm, Bombyx mori. Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression, 1628 (1). pp. 56-63. ISSN 0167-4781

Priyadarshini, P. and Murthy, B.S. and Nagaraju, J. and Singh, Lalji (2003) A GATA-binding protein expressed predominantly in the pupal ovary of the silkworm, Bombyx mori. Insect Biochemistry and Molecular Biology, 33 (2). pp. 185-195. ISSN 0965-1748

Prasad, M.D. and Nagaraju, J. (2003) A comparative phylogenetic analysis of full-length mariner elements isolated from the Indian tasar silkmoth, Antheraea mylitta (Lepidoptera: saturniidae). Journal of Biosciences, 28 (4). pp. 443-53. ISSN 0250-5991

Sreenu, V.B. and Alevoor, V. and Nagaraju, J. and Nagarajaram, H.A. (2003) MICdb: database of prokaryotic microsatellites. Nucleic Acids Research, 31 (1). pp. 106-108. ISSN 1362-4962

Sreenu, V.B. and Ranjitkumar, G.K. and Swaminathan, S. and Priya, S. and Bose, B. and Pavan, M.N. and Thanu, G. and Nagaraju, J. and Nagarajaram, H.A. (2003) MICAS: a fully automated web server for microsatellite extraction and analysis from prokaryote and viral genomic sequences. Applied Bioinformatics, 2 (3). pp. 165-168. ISSN 1175-5636

Prasad, M.D. and Nurminsky, D.L. and Nagaraju, J. (2002) Characterization and molecular phylogenetic analysis of mariner elements from wild and domesticated species of silkmoths. Molecular Phylogenetics and Evolution, 25 (1). pp. 210-17. ISSN 1055-7903

Nagaraju, J. (2002) Application of genetic principles for improving silk production. Current Science, 83 (4). pp. 409-414. ISSN 0011-3891

Nagaraju, J. and Goldsmith, M.R. (2002) Silkworm genomics - progress and prospects. Current Science, 83 (4). pp. 415-425. ISSN 0011-3891

Nagaraju, J. and Kathirvel, M. and Kumar, R.R. and Siddiq, E.A. and Hasnain, S.E. (2002) Genetic analysis of traditional and evolved Basmati and non-Basmati rice varieties by using fluorescence-based ISSR-PCR and SSR markers. Proceedings of the National Academy of Sciences, 99 (9). pp. 5836-5841. ISSN 0027-8424

Nagaraju, J. and Kathirvel, M. and Subbaiah, E.V. and Muthulakshmi, M. and Kumar, L.D. (2002) FISSR-PCR: a simple and sensitive assay for highthroughput genotyping and genetic mapping. Molecular and Cellular Probes, 16 (1). pp. 67-72. ISSN 0890-8508

Jain, D. and Nair, D.T. and Swaminathan, G.J. and Abraham, E.G. and Nagaraju, J. and Salunke, D.M. (2001) Structure of the induced antibacterial protein from tasar silkworm, Antheraea mylitta. Implications to molecular evolution. The Journal of Biological Chemistry, 276 (44). pp. 41377-82. ISSN 0021-9258

Nagaraju, J. (2001) Identification of a gene associated with Bt resistance in the lepidopteran host, Heliothis virescens and its implications in Bt transgenic based pest control. Current Science , 81 (7). pp. 746-747. ISSN 0011-3891

Nagaraju, J. and Reddy, K.D. and Nagaraja, G.M. and Sethuraman, B.N. (2001) Comparison of multilocus RFLPs and PCR-based marker systems for genetic analysis of the silkworm, Bombyx mori. Heredity, 86 (Pt 5). pp. 588-597. ISSN 0018-067X

Kumar, L.D. and Kathirvel, M. and Rao, G.V. and Nagaraju, J. (2001) DNA profiling of disputed chilli samples (Capsicum annum) using ISSR-PCR and FISSR-PCR marker assays. Forensic science international, 116 (1). pp. 63-68. ISSN 0379-0738

Nagaraju, J. (2000) Recent advances in the silkworm, Bombyx mori. Current Science , 78 (2). pp. 151-161. ISSN 0011-3891

Reddy, K.D. and Nagaraju, J. and Abraham, E.G. (1999) Genetic characterization of the silkworm Bombyx mori by simple sequence repeat (SSR)-anchored PCR. Heredity, 83 (6). pp. 681-687. ISSN 0018-067X

Reddy, K.D. and Abraham, E.G. and Nagaraju, J. (1999) Microsatellites in the silkworm, Bombyx mori: abundance, polymorphism, and strain characterization. Genome, 42 (6). pp. 1057-65. ISSN 0831-2796

Sharma, A. and Niphadkar, M.P. and Kathirvel, P. and Nagaraju, J. and Singh, Lalji (1999) Brief communication. DNA fingerprint variability within and among the silkworm Bombyx mori varieties and estimation of their genetic relatedness using Bkm-derived probe. Journal of Heredity, 90 (2). pp. 315-319. ISSN 1471-8505

Nagaraju, J. and Singh, Lalji (1997) Assessment of genetic diversity by DNA profiling and its significance in silkworm,Bombyx mori. Electrophoresis, 18 (9). pp. 1676-1681. ISSN 0173-0835